ltn1 (ltn1,si:dkey-175g6.5,LOC107720671,LOC107702790,LOC107708613,LOC107675987,LOC107554323)


Basic Information

Item Value
gene id ltn1
gene name ltn1,si:dkey-175g6.5,LOC107720671,LOC107702790,LOC107708613,LOC107675987,LOC107554323
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7956834 ~ 7999036 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250159.1
CGTGTGCGTGACATCATAACCGCGCGCCTAGTGTGACTCAAGTCGGAAAAGAAGCAGAAGCTCAGCCGACGAGAGAATGGGTggcaaaaataaacagagaaCGAAAGGAAATGTTCGGCCATCCAGCAGTGGCAGAGCCGCTGATCTGTTGGCCAGGGAAAGTGGCATTGTCCCGGGGTTTGTGGGATTTGGTGTTTCCACCTCCAGTGACCCAGGATACGTACCTGCAGTACAGGGAGCAGAGGAGATAGACAACCTAGTGGATGCAGACTTCCGCATGGTTCTGCGGAAGCTTTCCAAGAGAGATGCAGTCACAAAATTGAAGGCAGTGCAAGAGTTTGGAGCAATGTGTCAAGAGCGAGAGCCTGATGTTGTAAAAGGTGTTCTCCCATACTGGCCTCGGATATACTGCCGAATATCAGTGGACCACGACCGCCGCGTGCGAGAGGCCACGCAGCTGGCCTTTGAGCAGCTGGTTTTAAAAGTGAAGAGGAATTTGGCCCCCTACCTGAAGAGCATCATGGGGCACTGGCTCATCTCTCAGTGTGACACGTACTCTCCTGCTGCCTCGGCTGCCAGCTCTGCTTTCCAGGCCGCATTTCCCCTGAATAAACAAGCAGAGGCCATCAGCTTCTGTAAAGATGAGGTTGTGAATGTTCTCCAAGACAACTTGCTGAAAGAAACGGCTGACACTCTCAGTGATCCTCAgAGTGTTCCAGAGGAGGAGCGAGAGGCGAAGTACATCCGTCTGTTGACCTGCTCTTTGCTGGCTCTAAAGAGACTGCTGAGCGTTTTACCCGAGCAGGACAGAGAGCTGCTGAAGGAGCGACTGACCCAACTCCTCGCACAGGGAAAATTCTGGAAGTACAGCAAACACAAGACCCCACAGattcgAGGGGCGTTCTTTGAGCTGATTGCTACCATGTGTGCGCACACACCCCAGCTGATCCAGGCAGAAGCGGCCCGAGCGTGTTCTTCTGTGCTGCTGTCAATCGATGACACAGACCCGGTGGTGCTGCCCCCTCTGTGGGAGGCGGTCCTCCATATTCTGTCCTGCGTTGATAACTGCTGGGCGCATGTCAATGCCAGGAAAGGTGTGATGCCGAAGCTCTGGGTGCTTCTTAAAGAAGGAGGTCGTGGTCTTGCAACATCTCTGCATCCAAACCTGCTTCCGTTTATAAGCAAACTGCCGGCTGAGATCACACAGCCCAACTTGGAGTTCTCCAGGGCATTCCTCACATCTGTCATAGAGGGGCTGTCGAGCGATCGTGCCACGTCCAGTCCCTCAGAGAGTGCAGCCATTATTTTTGCCACAATGGAGTGCCTTCGGTTCATCATCCTACAGAATGCTGGAGACGAGCAGGAGCAAAGAAACATCCAGAACATGCTGATCTCAGAACAGCTCCTGCCGTTGATTGACAGAGCTCTGGGACACCCATCGCTGCAGACGGGTCCTCTGTTCCCTCAGGTCTCTGATATGCTGCTGTCCTGGGAAAAGCGGGTGGCTGGGAAAGAGGCTCCCACCTTTCAAAGACTGCTGTCAGACTTCTGGGAGGGTCTGGGTCGTCTGTGCACAGCATACGTAGACTGTGAAGAAGCCAAGCAAACAGCCCTGGAGGGCATTGCCTCGCTCCTGCAGATTATGCATAACCCGAACAGTGCCAGTAAAAAggctaagaagaagaaaactgtGAAAATTTGCTTCACGGACATGGAAGAAAGAGGCCAAGGAGAGGAACCTCCCAGGGAAGCTCCAGCGGTCGAGGAGCAGCACTGTCCCTTGAGAAACGGACACCTGCTGGATTTGGTGTGCCAGCTGGCGGAGCTCAACATGGTGTACGTGAGTGAACGGGAGTCGGAAAGGCACCTGCGCTTTTTGTCTCAGCTGCTTGGGGTGTTCCCGAGTCCTCAGGTGTTCCAGGTGCTGCTGAGGCCGGAGGAAATGAAGCCTGAAATGGGGCCGGAGCTCAGGCCGCTCGCTGAGAACGCAGCTGTCCACTTTCTTCTACAAAGAGTGACTGTGTGGTTAAAACAAGACAACAGGAAGGACACTGACTTCCTGGTAGACATGGTTTTCAGTTCGCTGCAGTGCTGCAGCTCCAGTGATGACAAGACGCTGATCCTCAACCACATCAGTAGGGATTTGAATTGGAGTGTGACTCTTCAGCTTATCGAAAAGGCGTGTTCAGATCCTGTCCGTTTGGAGGTGTGTGTCGGCTGGCTGAGGGGTCCAGTGTTGGGAGAGAGGTTGGTGGGTCTGGCTGGAGAGCTGTGTGTGATGGGTCTGCGAGGATCACCTTCTTCATCATCCCATCATCATGTACACGGCTGGCCTCTCATCAGCCTGGCTCTGTCACAGCAGCACAATAATGCGCCTCTCATTGGCAAGGCCTATGTCAAGCAGATCATTGACAAGCTTCACGCCACCTTGTCAGAAGCAAAGGGCATGTCAGACGCCGGGAACATTGAGCCTCTGGTCACTTTCATCTCTGATGTGGCTGCGACCTTCTTTTCTTCGGTGAAAGGCTGCCTGCTGCTTGCGTCTGCCGAGGACCTGCTTATGACCGTTTTTCAACTTTGCGCACAGGACCAAATCTCCGCTCACCTCTCAGATGCTCTTCTCCTAAAGCTGCAGCAGGCCTACACTGCTGGCGTTCAATCACTGATCACTCACCTGGGTGCAGGGTTCACAAAGGGCACTCTCCTCCACAACATTGCACTCTGGGTTAAAAGTCAGCTACTCACCATGCCACTGACAGTCAAAAGTCTGCAGGTTCTGGTGCAGGCTGTCGAAAGTCTGGCTCAGACCATCGCCTCAGCCCAGAACACCAGCTGTCTCCTGTCTCAGTTTATCTGCTGTCTTACTCCTACTGAAGAGGAATGGAGTTGCATTAGGCGGGCCCTGCCCCCTCAGTGGGTGAAACGCCCTCTACTGTGCGGTCGTCTCAGAGTCACCGGTGAATACCCCTGCATGGGCTTTTTTTCGACTAACCAGCTGCCCGCACACCTGTGTGTAAGTGCATTACTGGGCAGAATCATCTTCACTGCAGCTTCACCTGACGACCAGCAGGTGGAGGCAGACTTCTCTGAAATTCCTGATCTCAAACACATAGtTTCAGAGATTTTCTATGGACTTCAGTGGTGTGAAGAAATGGAGCTTTCACCATCCTTGGTGTCTGAATATCACAAGCTGTTGCAGTCCTGGAACTTAGAGCAGAGAATCCACAGCAACAGCCTGATCCAAACtactctgtcacacacacttttcacaaGGTCACAAGAAGAGGGCTCCCTTTGGTCGCTGGCTCTGGCAAAATACATGCAGAACAGCAAAATGGAACCAAGCCACATTAAGAACTTGTATGGCAACGTAGAAAGttTCTTCCCCCTGTCAGAACACAGCGTGAGCACGGTGCAGGTCTTGTGTCCATTTCTAGCCAGCGAAGAGAGAGAATCCCTCATCGCCTTGTGTGTCGCTGAGCTCCTTAACTGGCAGGACGGAGAGCAGGACTGCATCGACAGTGTGCGGGGCTGTCTGGCCGTGCTGCTCTGCTGTCTTCAGGCCAACACGGCTGTGGAGGATGAGATCTTGTTGGCTGTCGTAGCCACGATTGCCGAATGGAGGAACAGTAGAGAGGAGTGGTTCCTCTTCAGCAGAGACCTTGGAAAAGTCTCCGCCGCAGGGCTCTTATTGGCAGTGGAAATGATCCGTTTCCTGTGCTGGATGGTGGATCATTCTCCCACAGTCCTGGGAAACACTCATTGGGATCTCCTGCTCTGCTCGATGCTGGCATGGCTTGAGACCGCCAGTGAGAACAGCAGCATGTTCTGGAATCCTTGGGTgcagctgtttgtgtgtgcaaaCTGTGAGCTGATTGTTAGGCTGAGCGAGTTTTTCACATCGCCCCCTGCTGGCGTGGAGGAACAGCTTCCTCCCGAGCTGAACTCTGAGTGGAAGGAGTTCTTTTTGGAGGGAATTCACAACCTTTTGCTCCCACTGCTTATTAAAATCCCTGTGGAATTTACAGAGCCAGATGACCCTTTGTTCCCCCTGCCGGCATTGAGGGCAGTGGGGGAGGCTCTTACCTACATCCCTGTGGAGCTGCTCACACAGAATAAACTCCCTCCTCGGTTTGTAGCCGACCAGAGGAGCAGTCTGCCAGAGCCCCTCCAGACCCTGCTGAATACCCTCTCACCCCTGCTGCTCTTCAAAGCCCGGCCGTTACAGCTCGCGGTCTACCACATCCTACACAAGGTGATGCCTTCGTTGCCAGAGAGTGACAGTGAGAGTGTCAGCACTAAATCTGATGACGAAGATGGAGAAGAACCGTGCttGTCTCCTCCAGCAGCATTGATGAGCATCCTTTCTGCCACAGAAGAGCTCTTGGAGAATATTCTAGGTGGCATGCAAGTGGGTGAGTTTGCAGTGGTGCAACCCCTCAGCATGGAGCACTGCTTCATTCTGGGATATCTTCTGGCCTGGAAACTTCTCTTCACCTTCTTCAAGGCTTCTTCATCTCatctgcGAGCTCAGTACTCTCTACATTTGAAGAAGACTCGTTCTCTTCATAAACTCTTGCTCCACCTGTTCCGCCTGATGCCAGAGAACCCATCATTGCCTGGACAGCCAGCAGAACCCTCAAACAAAGAACCCAAAACCTTCTTCACTGAGAGcttgtctctctctccacaGAAAACTGAAGGTTTGCAGTTTGAGGTTCCCCATCTGGCCTGCTCTGTGTACTATGGTGCGTTGAAGGACTTGCCTGCAATGGTGCGTCTGTGGTGGAACAGCCAAGAGAAACGTGTCTTCAGCACGGTGGATAAATTCACCAGCAAGTACGTCAGCAGCGTTTTGTCTGCGCAGGAGATCGCCTCCGTTCAGTCCAGCACCCAGACTTTTGAGAACATGACGGTGAAAGCACGGTCTGCCGCGCGGGAAGTGATCGCGACTTACTCTGTCGACGATATCTTCATAGAGCTGGTGATTCAGCTGCCTCAGAATTATCCGCTCAGCTCTATCTCGGTGGAAAGTGGGCGGAGAGTGGGCGTGGCTGTTCAGCAGTGGCGCAATTGGATGCTTCAGCTCAGCACGTACCTTACGCATCAGAATGGCAGTATTCTCGAAGGTCTGTCGCTGTGGAAGAACAATGTTGACAAGCGTTTTGAGGGGGTGGAGGACTGTATGATCTGCTTCTCTGTCATTCACGGATCCAATTACTCGCTGCCAAAGAAAGCCTGCCGTACCTGCAAAAAGAAGTTCCACTCTGCCTGTCTGtataaATGGTTCACATCCAGCAACAAATCCACATGTCCTCTGTGCCGAGAGACTTTCTTCTAAGCTCTGTCTCCATGGACACAATAACAGGTGAATGACGTCCTCGGCAAACAGCTGACTCGGAAAGAAATGttctgttcatttgtttgtacATGCGATTTTTGCAGTGCTGCAAATTACCGTGGCCTTTTAGTTTCTGATTCTGAAGATGCACCCAACAACACCCGTCACAAACGACAAAATGAACAAACGGTAGGAATTCCAGAAAACAAAGTACCCAGACTGGATTGAGGACAGCTTGACAGGACCATGAACAAGCTTGCACGTTCAtggccttaaaggaatagttcaccaaaaatcaacattctgtcattatttgcaCCTAcgcatgtcattccaaacctgtttcatgttattattatttttattttttcgatGGAACACAGAATTTTGAAGGACATTGACACTTGCCAAGCCCAAAAAAgtcagtataaataaaaaaaaaagtatagtacAATACTTaggttgttctttttttaaacaaaaatgtagatGCATACCAGTTTAGGATGTCATGagtaaataatcacaaaatgtttttttgtgtgtgtgtgtgtgtgtgtgtgtgtatactatttctttcatttttgttttaacgtGGCAAAATGGTTCATCGCACATCATGTTACATAAATGCCCTATTCACAAATAAATCCAACTATTCATAGTTTCTA
>XM_043250160.1
CGTGTGCGTGACATCATAACCGCGCGCCTAGTGTGACTCAAGTCGGAAAAGAAGCAGAAGCTCAGCCGACGAGAGAATGGGTggcaaaaataaacagagaaCGAAAGGAAATGTTCGGCCATCCAGCAGTGGCAGAGCCGCTGATCTGTTGGCCAGGGAAAGTGGCATTGTCCCGGGGTTTGTGGGATTTGGTGTTTCCACCTCCAGTGACCCAGGATACGTACCTGCAGTACAGGGAGCAGAGGAGATAGACAACCTAGTGGATGCAGACTTCCGCATGGTTCTGCGGAAGCTTTCCAAGAGAGATGCAGTCACAAAATTGAAGGCAGTGCAAGAGTTTGGAGCAATGTGTCAAGAGCGAGAGCCTGATGTTGTAAAAGGTGTTCTCCCATACTGGCCTCGGATATACTGCCGAATATCAGTGGACCACGACCGCCGCGTGCGAGAGGCCACGCAGCTGGCCTTTGAGCAGCTGGTTTTAAAAGTGAAGAGGAATTTGGCCCCCTACCTGAAGAGCATCATGGGGCACTGGCTCATCTCTCAGTGTGACACGTACTCTCCTGCTGCCTCGGCTGCCAGCTCTGCTTTCCAGGCCGCATTTCCCCTGAATAAACAAGCAGAGGCCATCAGCTTCTGTAAAGATGAGGTTGTGAATGTTCTCCAAGACAACTTGCTGAAAGAAACGGCTGACACTCTCAGTGATCCTCAgAGTGTTCCAGAGGAGGAGCGAGAGGCGAAGTACATCCGTCTGTTGACCTGCTCTTTGCTGGCTCTAAAGAGACTGCTGAGCGTTTTACCCGAGCAGGACAGAGAGCTGCTGAAGGAGCGACTGACCCAACTCCTCGCACAGGGAAAATTCTGGAAGTACAGCAAACACAAGACCCCACAGattcgAGGGGCGTTCTTTGAGCTGATTGCTACCATGTGTGCGCACACACCCCAGCTGATCCAGGCAGAAGCGGCCCGAGCGTGTTCTTCTGTGCTGCTGTCAATCGATGACACAGACCCGGTGGTGCTGCCCCCTCTGTGGGAGGCGGTCCTCCATATTCTGTCCTGCGTTGATAACTGCTGGGCGCATGTCAATGCCAGGAAAGGTGTGATGCCGAAGCTCTGGGTGCTTCTTAAAGAAGGAGGTCGTGGTCTTGCAACATCTCTGCATCCAAACCTGCTTCCGTTTATAAGCAAACTGCCGGCTGAGATCACACAGCCCAACTTGGAGTTCTCCAGGGCATTCCTCACATCTGTCATAGAGGGGCTGTCGAGCGATCGTGCCACGTCCAGTCCCTCAGAGAGTGCAGCCATTATTTTTGCCACAATGGAGTGCCTTCGGTTCATCATCCTACAGAATGCTGGAGACGAGCAGGAGCAAAGAAACATCCAGAACATGCTGATCTCAGAACAGCTCCTGCCGTTGATTGACAGAGCTCTGGGACACCCATCGCTGCAGACGGGTCCTCTGTTCCCTCAGGTCTCTGATATGCTGCTGTCCTGGGAAAAGCGGGTGGCTGGGAAAGAGGCTCCCACCTTTCAAAGACTGCTGTCAGACTTCTGGGAGGGTCTGGGTCGTCTGTGCACAGCATACGTAGACTGTGAAGAAGCCAAGCAAACAGCCCTGGAGGGCATTGCCTCGCTCCTGCAGATTATGCATAACCCGAACAGTGCCAGTAAAAAggctaagaagaagaaaactgtGAAAATTTGCTTCACGGACATGGAAGAAAGAGGCCAAGGAGAGGAACCTCCCAGGGAAGCTCCAGCGGTCGAGGAGCAGCACTGTCCCTTGAGAAACGGACACCTGCTGGATTTGGTGTGCCAGCTGGCGGAGCTCAACATGGTGTACGTGAGTGAACGGGAGTCGGAAAGGCACCTGCGCTTTTTGTCTCAGCTGCTTGGGGTGTTCCCGAGTCCTCAGGTGTTCCAGGTGCTGCTGAGGCCGGAGGAAATGAAGCCTGAAATGGGGCCGGAGCTCAGGCCGCTCGCTGAGAACGCAGCTGTCCACTTTCTTCTACAAAGAGTGACTGTGTGGTTAAAACAAGACAACAGGAAGGACACTGACTTCCTGGTAGACATGGTTTTCAGTTCGCTGCAGTGCTGCAGCTCCAGTGATGACAAGACGCTGATCCTCAACCACATCAGTAGGGATTTGAATTGGAGTGTGACTCTTCAGCTTATCGAAAAGGCGTGTTCAGATCCTGTCCGTTTGGAGGTGTGTGTCGGCTGGCTGAGGGGTCCAGTGTTGGGAGAGAGGTTGGTGGGTCTGGCTGGAGAGCTGTGTGTGATGGGTCTGCGAGGATCACCTTCTTCATCATCCCATCATCATGTACACGGCTGGCCTCTCATCAGCCTGGCTCTGTCACAGCAGCACAATAATGCGCCTCTCATTGGCAAGGCCTATGTCAAGCAGATCATTGACAAGCTTCACGCCACCTTGTCAGAAGCAAAGGGCATGTCAGACGCCGGGAACATTGAGCCTCTGGTCACTTTCATCTCTGATGTGGCTGCGACCTTCTTTTCTTCGGTGAAAGGCTGCCTGCTGCTTGCGTCTGCCGAGGACCTGCTTATGACCGTTTTTCAACTTTGCGCACAGGACCAAATCTCCGCTCACCTCTCAGATGCTCTTCTCCTAAAGCTGCAGCAGGCCTACACTGCTGGCGTTCAATCACTGATCACTCACCTGGGTGCAGGGTTCACAAAGGGCACTCTCCTCCACAACATTGCACTCTGGGTTAAAAGTCAGCTACTCACCATGCCACTGACAGTCAAAAGTCTGCAGGTTCTGGTGCAGGCTGTCGAAAGTCTGGCTCAGACCATCGCCTCAGCCCAGAACACCAGCTGTCTCCTGTCTCAGTTTATCTGCTGTCTTACTCCTACTGAAGAGGAATGGAGTTGCATTAGGCGGGCCCTGCCCCCTCAGTGGGTGAAACGCCCTCTACTGTGCGGTCGTCTCAGAGTCACCGGTGAATACCCCTGCATGGGCTTTTTTTCGACTAACCAGCTGCCCGCACACCTGTGTGTAAGTGCATTACTGGGCAGAATCATCTTCACTGCAGCTTCACCTGACGACCAGCAGGTGGAGGCAGACTTCTCTGAAATTCCTGATCTCAAACACATAGtTTCAGAGATTTTCTATGGACTTCAGTGGTGTGAAGAAATGGAGCTTTCACCATCCTTGGTGTCTGAATATCACAAGCTGTTGCAGTCCTGGAACTTAGAGCAGAGAATCCACAGCAACAGCCTGATCCAAACtactctgtcacacacacttttcacaaGGTCACAAGAAGAGGGCTCCCTTTGGTCGCTGGCTCTGGCAAAATACATGCAGAACAGCAAAATGGAACCAAGCCACATTAAGAACTTGTATGGCAACGTAGAAAGttTCTTCCCCCTGTCAGAACACAGCGTGAGCACGGTGCAGGTCTTGTGTCCATTTCTAGCCAGCGAAGAGAGAGAATCCCTCATCGCCTTGTGTGTCGCTGAGCTCCTTAACTGGCAGGACGGAGAGCAGGACTGCATCGACAGTGTGCGGGGCTGTCTGGCCGTGCTGCTCTGCTGTCTTCAGGCCAACACGGCTGTGGAGGATGAGATCTTGTTGGCTGTCGTAGCCACGATTGCCGAATGGAGGAACAGTAGAGAGGAGTGGTTCCTCTTCAGCAGAGACCTTGGAAAAGTCTCCGCCGCAGGGCTCTTATTGGCAGTGGAAATGATCCGTTTCCTGTGCTGGATGGTGGATCATTCTCCCACAGTCCTGGGAAACACTCATTGGGATCTCCTGCTCTGCTCGATGCTGGCATGGCTTGAGACCGCCAGTGAGAACAGCAGCATGTTCTGGAATCCTTGGGTgcagctgtttgtgtgtgcaaaCTGTGAGCTGATTGTTAGGCTGAGCGAGTTTTTCACATCGCCCCCTGCTGGCGTGGAGGAACAGCTTCCTCCCGAGCTGAACTCTGAGTGGAAGGAGTTCTTTTTGGAGGGAATTCACAACCTTTTGCTCCCACTGCTTATTAAAATCCCTGTGGAATTTACAGAGCCAGATGACCCTTTGTTCCCCCTGCCGGCATTGAGGGCAGTGGGGGAGGCTCTTACCTACATCCCTGTGGAGCTGCTCACACAGAATAAACTCCCTCCTCGGTTTGTAGCCGACCAGAGGAGCAGTCTGCCAGAGCCCCTCCAGACCCTGCTGAATACCCTCTCACCCCTGCTGCTCTTCAAAGCCCGGCCGTTACAGCTCGCGGTCTACCACATCCTACACAAGGTGATGCCTTCGTTGCCAGAGAGTGACAGTGAGAGTGTCAGCACTAAATCTGATGACGAAGATGGAGAAGAACCGTGCttGTCTCCTCCAGCAGCATTGATGAGCATCCTTTCTGCCACAGAAGAGCTCTTGGAGAATATTCTAGGTGGCATGCAAGTGGGTGAGTTTGCAGTGGTGCAACCCCTCAGCATGGAGCACTGCTTCATTCTGGGATATCTTCTGGCCTGGAAACTTCTCTTCACCTTCTTCAAGGCTTCTTCATCTCatctgcGAGCTCAGTACTCTCTACATTTGAAGAAGACTCGTTCTCTTCATAAACTCTTGCTCCACCTGTTCCGCCTGATGCCAGAGAACCCATCATTGCCTGGACAGCCAGCAGAACCCTCAAACAAAGAACCCAAAACCTTCTTCACTGAGAGcttgtctctctctccacaGAAAACTGAAGGTTTGCAGTTTGAGGTTCCCCATCTGGCCTGCTCTGTGTACTATGGTGCGTTGAAGGACTTGCCTGCAATGGTGCGTCTGTGGTGGAACAGCCAAGAGAAACGTGTCTTCAGCACGGTGGATAAATTCACCAGCAAGTACGTCAGCAGCGTTTTGTCTGCGCAGGAGATCGCCTCCGTTCAGTCCAGCACCCAGACTTTTGAGAACATGACGGTGAAAGCACGGTCTGCCGCGCGGGAAGTGATCGCGACTTACTCTGTCGACGATATCTTCATAGAGCTGGTGATTCAGCTGCCTCAGAATTATCCGCTCAGCTCTATCTCGGTGGAAAGTGGGCGGAGAGTGGGCGTGGCTGTTCAGCAGTGGCGCAATTGGATGCTTCAGCTCAGCACGTACCTTACGCATCAGAATGGCAGTATTCTCGAAGGTCTGTCGCTGTGGAAGAACAATGTTGACAAGCGTTTTGAGGGGGTGGAGGACTGTATGATCTGCTTCTCTGTCATTCACGGATCCAATTACTCGCTGCCAAAGAAAGCCTGCCGTACCTGCAAAAAGAAGTTCCACTCTGCCTGTCTGtataaATGGTTCACATCCAGCAACAAATCCACATGTCCTCTGTGCCGAGAGACTTTCTTCTAAGCTCTGTCTCCATGGACACAATAACAGctGAACACCTGTTAATGATCCCATTCCCCAGCTTTCCACGGGATGTCTCACAGTATATCTGCTGTCAGCGGCTCCCTTCTCCTGAGTTCCAATCCTCTGAAAGATTGTGGGTGTCTTAAACCGCTTTAAAAGGTTTCTCGTCATGAATGGCATTCCCATCACTCCAAAGTACCAGTGGAGAAGGTCACACGTCCGCTGAATGATTGATGGGAAAGGTGAAACTCTCAGTACATCATTCACTTCTCTCACACGCCGAAACAAAACACTCAACTTTGCCTCCATATTCAACAGCGCGTGGAAATGTTCTCAGTAACACGTTTGAACTTAAGATTCATATACGGAAGACTTATCTGGTATTGAGAATTAGATGAACGTGTCCTTTAGAAATCTTGATgctatttagtttagtttaattctGCTTTGCCGATTTCAAGGTGCATTATGATTACTCAGCCTCACAACAATTACTAAAAGTAATTGAGTTCATTCAGCCTGCCTAATTAAAAGTAGTTGATTCTCGCTCTGATAATAGTGTTATTAAAGGAATCGTCTGAGTTCAAAACGAGTTAAACTATATCGACGGCACCTGTGGCATGTTGTTGATTTAACCCCGAAcacttaaaaaacacaaacaaaaaaaggcattttaggCGGTTTAGAAGgcatttcattttgctttgcTAAAGTgcctttttttccacaaaaatatgtttgtccttttaatgtatataaaatataatatactattgtagtatattttactatatattagtgctgtcaaatcatTAAATGCGGTTAATCGcatcaaaaaagttttttgatcacatattatatgtgtatatttattatgtatgtgtattcaTTCTTATGAAAAACGGAAACagttatg
>XM_043250161.1
CGTGTGCGTGACATCATAACCGCGCGCCTAGTGTGACTCAAGTCGGAAAAGAAGCAGAAGCTCAGCCGACGAGAGAATGGGTggcaaaaataaacagagaaCGAAAGGAAATGTTCGGCCATCCAGCAGTGGCAGAGCCGCTGATCTGTTGGCCAGGGAAAGTGGCATTGTCCCGGGGTTTGTGGGATTTGGTGTTTCCACCTCCAGTGACCCAGGATACGTACCTGCAGTACAGGGAGCAGAGGAGATAGACAACCTAGTGGATGCAGACTTCCGCATGGTTCTGCGGAAGCTTTCCAAGAGAGATGCAGTCACAAAATTGAAGGCAGTGCAAGAGTTTGGAGCAATGTGTCAAGAGCGAGAGCCTGATGTTGTAAAAGGTGTTCTCCCATACTGGCCTCGGATATACTGCCGAATATCAGTGGACCACGACCGCCGCGTGCGAGAGGCCACGCAGCTGGCCTTTGAGCAGCTGGTTTTAAAAGTGAAGAGGAATTTGGCCCCCTACCTGAAGAGCATCATGGGGCACTGGCTCATCTCTCAGTGTGACACGTACTCTCCTGCTGCCTCGGCTGCCAGCTCTGCTTTCCAGGCCGCATTTCCCCTGAATAAACAAGCAGAGGCCATCAGCTTCTGTAAAGATGAGGTTGTGAATGTTCTCCAAGACAACTTGCTGAAAGAAACGGCTGACACTCTCAGTGATCCTCAgAGTGTTCCAGAGGAGGAGCGAGAGGCGAAGTACATCCGTCTGTTGACCTGCTCTTTGCTGGCTCTAAAGAGACTGCTGAGCGTTTTACCCGAGCAGGACAGAGAGCTGCTGAAGGAGCGACTGACCCAACTCCTCGCACAGGGAAAATTCTGGAAGTACAGCAAACACAAGACCCCACAGattcgAGGGGCGTTCTTTGAGCTGATTGCTACCATGTGTGCGCACACACCCCAGCTGATCCAGGCAGAAGCGGCCCGAGCGTGTTCTTCTGTGCTGCTGTCAATCGATGACACAGACCCGGTGGTGCTGCCCCCTCTGTGGGAGGCGGTCCTCCATATTCTGTCCTGCGTTGATAACTGCTGGGCGCATGTCAATGCCAGGAAAGGTGTGATGCCGAAGCTCTGGGTGCTTCTTAAAGAAGGAGGTCGTGGTCTTGCAACATCTCTGCATCCAAACCTGCTTCCGTTTATAAGCAAACTGCCGGCTGAGATCACACAGCCCAACTTGGAGTTCTCCAGGGCATTCCTCACATCTGTCATAGAGGGGCTGTCGAGCGATCGTGCCACGTCCAGTCCCTCAGAGAGTGCAGCCATTATTTTTGCCACAATGGAGTGCCTTCGGTTCATCATCCTACAGAATGCTGGAGACGAGCAGGAGCAAAGAAACATCCAGAACATGCTGATCTCAGAACAGCTCCTGCCGTTGATTGACAGAGCTCTGGGACACCCATCGCTGCAGACGGGTCCTCTGTTCCCTCAGGTCTCTGATATGCTGCTGTCCTGGGAAAAGCGGGTGGCTGGGAAAGAGGCTCCCACCTTTCAAAGACTGCTGTCAGACTTCTGGGAGGGTCTGGGTCGTCTGTGCACAGCATACGTAGACTGTGAAGAAGCCAAGCAAACAGCCCTGGAGGGCATTGCCTCGCTCCTGCAGATTATGCATAACCCGAACAGTGCCAGTAAAAAggctaagaagaagaaaactgtGAAAATTTGCTTCACGGACATGGAAGAAAGAGGCCAAGGAGAGGAACCTCCCAGGGAAGCTCCAGCGGTCGAGGAGCAGCACTGTCCCTTGAGAAACGGACACCTGCTGGATTTGGTGTGCCAGCTGGCGGAGCTCAACATGGTGTACGTGAGTGAACGGGAGTCGGAAAGGCACCTGCGCTTTTTGTCTCAGCTGCTTGGGGTGTTCCCGAGTCCTCAGGTGTTCCAGGTGCTGCTGAGGCCGGAGGAAATGAAGCCTGAAATGGGGCCGGAGCTCAGGCCGCTCGCTGAGAACGCAGCTGTCCACTTTCTTCTACAAAGAGTGACTGTGTGGTTAAAACAAGACAACAGGAAGGACACTGACTTCCTGGTAGACATGGTTTTCAGTTCGCTGCAGTGCTGCAGCTCCAGTGATGACAAGACGCTGATCCTCAACCACATCAGTAGGGATTTGAATTGGAGTGTGACTCTTCAGCTTATCGAAAAGGCGTGTTCAGATCCTGTCCGTTTGGAGGTGTGTGTCGGCTGGCTGAGGGGTCCAGTGTTGGGAGAGAGGTTGGTGGGTCTGGCTGGAGAGCTGTGTGTGATGGGTCTGCGAGGATCACCTTCTTCATCATCCCATCATCATGTACACGGCTGGCCTCTCATCAGCCTGGCTCTGTCACAGCAGCACAATAATGCGCCTCTCATTGGCAAGGCCTATGTCAAGCAGATCATTGACAAGCTTCACGCCACCTTGTCAGAAGCAAAGGGCATGTCAGACGCCGGGAACATTGAGCCTCTGGTCACTTTCATCTCTGATGTGGCTGCGACCTTCTTTTCTTCGGTGAAAGGCTGCCTGCTGCTTGCGTCTGCCGAGGACCTGCTTATGACCGTTTTTCAACTTTGCGCACAGGACCAAATCTCCGCTCACCTCTCAGATGCTCTTCTCCTAAAGCTGCAGCAGGCCTACACTGCTGGCGTTCAATCACTGATCACTCACCTGGGTGCAGGGTTCACAAAGGGCACTCTCCTCCACAACATTGCACTCTGGGTTAAAAGTCAGCTACTCACCATGCCACTGACAGTCAAAAGTCTGCAGGTTCTGGTGCAGGCTGTCGAAAGTCTGGCTCAGACCATCGCCTCAGCCCAGAACACCAGCTGTCTCCTGTCTCAGTTTATCTGCTGTCTTACTCCTACTGAAGAGGAATGGAGTTGCATTAGGCGGGCCCTGCCCCCTCAGTGGGTGAAACGCCCTCTACTGTGCGGTCGTCTCAGAGTCACCGGTGAATACCCCTGCATGGGCTTTTTTTCGACTAACCAGCTGCCCGCACACCTGTGTGTAAGTGCATTACTGGGCAGAATCATCTTCACTGCAGCTTCACCTGACGACCAGCAGGTGGAGGCAGACTTCTCTGAAATTCCTGATCTCAAACACATAGtTTCAGAGATTTTCTATGGACTTCAGTGGTGTGAAGAAATGGAGCTTTCACCATCCTTGGTGTCTGAATATCACAAGCTGTTGCAGTCCTGGAACTTAGAGCAGAGAATCCACAGCAACAGCCTGATCCAAACtactctgtcacacacacttttcacaaGGTCACAAGAAGAGGGCTCCCTTTGGTCGCTGGCTCTGGCAAAATACATGCAGAACAGCAAAATGGAACCAAGCCACATTAAGAACTTGTATGGCAACGTAGAAAGttTCTTCCCCCTGTCAGAACACAGCGTGAGCACGGTGCAGGTCTTGTGTCCATTTCTAGCCAGCGAAGAGAGAGAATCCCTCATCGCCTTGTGTGTCGCTGAGCTCCTTAACTGGCAGGACGGAGAGCAGGACTGCATCGACAGTGTGCGGGGCTGTCTGGCCGTGCTGCTCTGCTGTCTTCAGGCCAACACGGCTGTGGAGGATGAGATCTTGTTGGCTGTCGTAGCCACGATTGCCGAATGGAGGAACAGTAGAGAGGAGTGGTTCCTCTTCAGCAGAGACCTTGGAAAAGTCTCCGCCGCAGGGCTCTTATTGGCAGTGGAAATGATCCGTTTCCTGTGCTGGATGGTGGATCATTCTCCCACAGTCCTGGGAAACACTCATTGGGATCTCCTGCTCTGCTCGATGCTGGCATGGCTTGAGACCGCCAGTGAGAACAGCAGCATGTTCTGGAATCCTTGGGTgcagctgtttgtgtgtgcaaaCTGTGAGCTGATTGTTAGGCTGAGCGAGTTTTTCACATCGCCCCCTGCTGGCGTGGAGGAACAGCTTCCTCCCGAGCTGAACTCTGAGTGGAAGGAGTTCTTTTTGGAGGGAATTCACAACCTTTTGCTCCCACTGCTTATTAAAATCCCTGTGGAATTTACAGAGCCAGATGACCCTTTGTTCCCCCTGCCGGCATTGAGGGCAGTGGGGGAGGCTCTTACCTACATCCCTGTGGAGCTGCTCACACAGAATAAACTCCCTCCTCGGTTTGTAGCCGACCAGAGGAGCAGTCTGCCAGAGCCCCTCCAGACCCTGCTGAATACCCTCTCACCCCTGCTGCTCTTCAAAGCCCGGCCGTTACAGCTCGCGGTCTACCACATCCTACACAAGGTGATGCCTTCGTTGCCAGAGAGTGACAGTGAGAGTGTCAGCACTAAATCTGATGACGAAGATGGAGAAGAACCGTGCttGTCTCCTCCAGCAGCATTGATGAGCATCCTTTCTGCCACAGAAGAGCTCTTGGAGAATATTCTAGGTGGCATGCAAGTGGGTGAGTTTGCAGTGGTGCAACCCCTCAGCATGGAGCACTGCTTCATTCTGGGATATCTTCTGGCCTGGAAACTTCTCTTCACCTTCTTCAAGGCTTCTTCATCTCatctgcGAGCTCAGTACTCTCTACATTTGAAGAAGACTCGTTCTCTTCATAAACTCTTGCTCCACCTGTTCCGCCTGATGCCAGAGAACCCATCATTGCCTGGACAGCCAGCAGAACCCTCAAACAAAGAACCCAAAACCTTCTTCACTGAGAGcttgtctctctctccacaGAAAACTGAAGGTTTGCAGTTTGAGGTTCCCCATCTGGCCTGCTCTGTGTACTATGGTGCGTTGAAGGACTTGCCTGCAATGGTGCGTCTGTGGTGGAACAGCCAAGAGAAACGTGTCTTCAGCACGGTGGATAAATTCACCAGCAAGTACGTCAGCAGCGTTTTGTCTGCGCAGGAGATCGCCTCCGTTCAGTCCAGCACCCAGACTTTTGAGAACATGACGGTGAAAGCACGGTCTGCCGCGCGGGAAGTGATCGCGACTTACTCTGTCGACGATATCTTCATAGAGCTGGTGATTCAGCTGCCTCAGAATTATCCGCTCAGCTCTATCTCGGTGGAAAGTGGGCGGAGAGTGGGCGTGGCTGTTCAGCAGTGGCGCAATTGGATGCTTCAGCTCAGCACGTACCTTACGCATCAGAATGGCAGTATTCTCGAAGGTCTGTCGCTGTGGAAGAACAATGTTGACAAGCGTTTTGAGGGGGTGGAGGACTGTATGATCTGCTTCTCTGTCATTCACGGATCCAATTACTCGCTGCCAAAGAAAGCCTGCCGTACCTGCAAAAAGAAGTTCCACTCTGCCTGTCTGtataaATGGTTCACATCCAGCAACAAATCCACATGTCCTCTGTGCCGAGAGACTTTCTTCTAAGCTCTGTCTCCATGGACACAATAACAGTGCTGCAAATTACCGTGGCCTTTTAGTTTCTGATTCTGAAGATGCACCCAACAACACCCGTCACAAACGACAAAATGAACAAACGGTAGGAATTCCAGAAAACAAAGTACCCAGACTGGATTGAGGACAGCTTGACAGGACCATGAACAAGCTTGCACGTTCAtggccttaaaggaatagttcaccaaaaatcaacattctgtcattatttgcaCCTAcgcatgtcattccaaacctgtttcatgttattattatttttattttttcgatGGAACACAGAATTTTGAAGGACATTGACACTTGCCAAGCCCAAAAAAgtcagtataaataaaaaaaaaagtatagtacAATACTTaggttgttctttttttaaacaaaaatgtagatGCATACCAGTTTAGGATGTCATGagtaaataatcacaaaatgtttttttgtgtgtgtgtgtgtgtgtgtgtgtgtatactatttctttcatttttgttttaacgtGGCAAAATGGTTCATCGCACATCATGTTACATAAATGCCCTATTCACAAATAAATCCAACTATTCATAGTTTCTA

Function

symbol description
ltn1 Predicted to enable ribosomal large subunit binding activity and ubiquitin protein ligase activity. Predicted to be involved in rescue of stalled ribosome and ribosome-associated ubiquitin-dependent protein catabolic process. Predicted to be part of RQC complex. Predicted to be active in cytosol. Orthologous to human LTN1 (listerin E3 ubiquitin protein ligase 1).

NR:

description
E3 ubiquitin-protein ligase listerin, partial

GO: NA

KEGG:

id description
K22377 LTN1; E3 ubiquitin-protein ligase listerin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250159.1 False 6012 mRNA 0.51 30 7956834 7974337
XM_043250160.1 True 6257 mRNA 0.50 31 7956834 7999036
XM_043250161.1 False 5935 mRNA 0.51 31 7956834 7974337

Neighbor

gene id symbol gene type direction distance location
slc25a1a slc25a1a,LOC107720673,LOC107554324,LOC107586170,LOC107708615,LOC108424536,LOC108276564 coding upstream 5208 7947306 ~ 7951626 (+)
si:dkey-175g6.2 si:dkey-175g6.2,LOC107702794,LOC107720675,LOC107554299,LOC107586203,LOC107742340,LOC107676019 coding upstream 20447 7932083 ~ 7936387 (+)
c10h17orf49 zgc:103508,LOC107720679,LOC107742347,LOC107702799,LOC107675997,LOC107586165,LOC107554320,LOC105902403 coding upstream 67604 7885614 ~ 7889230 (+)
med11 med11,LOC107720680,LOC107702800,LOC107676028 coding upstream 73309 7881885 ~ 7883525 (+)
ap4m1 ap4m1,LOC107554303,LOC107702797,LOC107742404,LOC107720677,LOC107586161,LOC107675998 coding upstream 85386 7866335 ~ 7871448 (+)
LOC122352901 NA coding downstream 98253 8097289 ~ 8099806 (+)
LOC122352908 NA coding downstream 111055 8110091 ~ 8112207 (+)
LOC122352903 NA coding downstream 113441 8112477 ~ 8116789 (+)
LOC122352913 unc13bb,LOC107686461,LOC107713368 coding downstream 160607 8159643 ~ 8185650 (+)
LOC122352887 slc5a1,LOC107688629,LOC107713298,LOC107744177,LOC106563210,LOC105913283 coding downstream 229272 8228308 ~ 8241456 (+)
G75607 NA non-coding upstream 54103 7901223 ~ 7902731 (+)
G75591 LOC107720685,LOC107586160,LOC107676011 non-coding upstream 97122 7840598 ~ 7859712 (+)
G75593 LOC107678008 non-coding upstream 107598 7845219 ~ 7849236 (+)
G75583 NA non-coding upstream 121935 7806361 ~ 7834899 (+)
G75574 NA non-coding upstream 274394 7682154 ~ 7682440 (+)
G75629 NA non-coding downstream 37098 8036134 ~ 8069911 (+)
G75766 NA non-coding downstream 166412 8165448 ~ 8165704 (+)
G75774 NA non-coding downstream 286119 8285155 ~ 8285865 (+)
G75799 NA non-coding downstream 314525 8313561 ~ 8314122 (+)
G75814 LOC107569391,LOC107713297,LOC107744111,LOC107686454,LOC107562576 non-coding downstream 398796 8397832 ~ 8462407 (+)
arrb2a arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026 other upstream 76734 7872539 ~ 7880100 (+)
trnat-agu_2 NA other upstream 94801 7861960 ~ 7862033 (+)
trnas-gcu_13 NA other upstream 95160 7861593 ~ 7861674 (+)
LOC122353465 NA other upstream 95455 7861246 ~ 7861379 (+)
si:ch211-237l4.6 NA other upstream 134316 7817810 ~ 7822518 (+)
G75750 NA other downstream 102440 8101476 ~ 8102924 (+)
LOC122352912 fam136a,LOC107569401,LOC107562571,LOC107713366,LOC107744116,LOC107686460,LOC107688083 other downstream 580973 8580009 ~ 8581128 (+)
G75935 LOC107556871,LOC107718714,LOC107720665,LOC107592158 other downstream 714167 8713203 ~ 8716277 (+)
G75937 NA other downstream 734743 8733779 ~ 8734996 (+)
gbe1a gbe1,LOC107685012,LOC107708609,LOC106581537,LOC108410718,LOC105900410 other downstream 1077830 9076866 ~ 9207335 (+)

Expression


Co-expression Network