vldlr (vldlr,LOC107705052,LOC107548665,LOC107558669,LOC107667264)


Basic Information

Item Value
gene id vldlr
gene name vldlr,LOC107705052,LOC107548665,LOC107558669,LOC107667264
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 2086121 ~ 2105289 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250207.1
ACACGGCGCGCGAAGGGCAGGTTCGTCGGATGAAGTGGTACAGAAAGGGTTAACGGCGTGTAAATGACATGTTGAAGGAGAAAAAAACGCGCCTGCGTTCGGCGGTGCTTATTCGCTGCAGGTTCACGCTATCAGTAAATTAGGAAATGGATTGCGGTTCCGCGAGCGCTTCGCGTGCGTGGAGAGACTAACCGGGGAGCTGcctgaatgaaataaaagcccGCGGTACACGCTGCTTTCTGTTTGTCCCGCGAAGACGTGTCTGCCCGCTGCGCTACAATATCAGGGACGAGGCCACAGACGGACACGGCGTTCAGCTCCCCGACGCGAAATGGTCACGTCTATTCTGTGGCTCCTCATTCTGCCGGtgtgtcttcagctgtgtggaTTTTCGCGCGCTTCCCGAACAGAATGTGAGCAGTCCCAGTTCCAGTGTGGGAACGGCCGGTGCATCCCGTCTGTGTGGCAGTGCGACGGAGACCTGGACTGCTCGGACGGGAGCGACGAGACGTCCTGCGTGAGGAAGACCTGCGCCGAGGTGGACTACGTCTGCCGCAGTGGACAGTGTATTCCCAAGAGATGGCAGTGCGACGGAGAACCAGACTGCGAGGACGGCTCAGACGAGAGCATCGAAATGTGCCACACGAGGACCTGCCGAGTGAACGAGTTCAGCTGTGGCGTCGGCTCCACACAGTGCATTCCCGTCTTCTGGAAGTGTGACGGTGAGAAGGACTGCGACAACGGAGAGGACGAGATTAACTGTGGTAACATTACATGCGCTCCTCTGGAGTTCACCTGTGCCAGCGGCCGCTGCGTTTCTCGTAATTTCGTCTGTAACGGCGAGGACGACTGCGGGGACGGCAGCGACGAACAGGACTGCGCTCCTGCTTCCTGCGGCCCGAGTGAAGTCCCTTGTGGAAATAATACCTGCATTCCTAGAAGCTGGCTGTGCGATGACGATGTGGACTGCCAGGACCAATCGGACGAGTCGCCAGAGCGCTGCGGGCGCAACCCCACCCCGCCAGCGAAGTGCTCTCCCAGCGAGATGCAGTGCAGTTCTGGGGAATGCATACACAGGAAGTGGCGCTGTGACGGGGATCCAGACTGCAAGGACGGCAGCGACGAGAAAAACTGCTCTGCCCGTACCTGCAGGCCCGACCAGTTCAAGTGTGATGACGGCAGCTGTATCCATGGCAGCCGACGGTGCAATAGCTTCCGAGATTGTGCAGACGGCACAGATGAAGTCAACTGCAAAAACTTAACTCAGTGTAACGGCCCTGACCAGTTCAAGTGCCGGAGTGGAGAGTGTATTGAGATGAGTAAGGTGTGTAATAAAGCCCGTGACTGTCCTGACTGGAGTGATGAACCCATCAAAGAGTGCAATATGAATGAATGCCTGCTCAATAACGGAGGCTGCTCGCACATCTGCCGCGACCTAACGATTGGCTACGAGTGCGACTGCACGCCAGGACTCCAGCTCATCGATCGCAAGACCTGCGGTGATGTCAATGAGTGCCTCAACCCTGGTATATGCAGTCAAATATGTATAAATCTTAAAGGAGGATACAAATGTGAGTGTCACAATGGCTACCAGATGGACCCCACGACTGGAGTTTGCAAGGCTGTAGGTAAAGAGCCCTGTCTTATTTTCACCAATCGAAGAGACATCCGTAAACTAGGACTGGAGCGGAGAGAATATACTCAGATTGTGGAGCAGCTGCGGAACACAGTAGCTGTAGATGCTGACTTCGTTCAGCAAACAATATTCTGGGCTGACCTGGGCCAGAAGGCAATTTTTAGcACAGTGTTAGATAAGCAAGAGGCAAGCCATATGAAAGTGATTGACAACGTTCAGATGCCTGTTGGGATTGCAGTGGACTGGATTTACAAAAACATCTACTGGTCAGACCTAGGCAGTAAGAATATAGCAGTGGCCAATTTTAATGGGACTAGGAGGAAGGTACTGTTTAACAGCGGCCTGAAGGAACCAGCCTCTATTGCTGTAGATCCTCTATCAggGTTCCTGTATTGGTCGGACTGGGGTGAGCCTGCTAAGATTGAGAAGTCTGGTATGAATGGGATTGACAGACAGGTCCTAGTAGAGACAGACATTCAGTGGCCCAATGGAATCACTCTCGATCTGATCAAGGGCCGACTCTACTGGGTGGATTCAAAGCTGCACATGCTTTGTAGTGTAGACTTGAATGGAGACAACCGCCGGAAGGTGCTGCAGTCACCAGACTACCTTGCCCACCCTTTCGCCCTTACTGTTTTTGAGGATCGAGTGTTCTGGACAGATGGTGAGAATAAGGCAATCTACGGTGCAAACAAGTTCACAGGATCTGATGTAACTCTGCTTGCCAGCAACCTCAATGAAGCCCAAGACATCATTGTGTACCATGAGCTAATTCAGCTGTCTGGGACCAACTGGTGTAACGAGAAGGTGGAGAATGGAGGCTGTTCCTTCATGTGTCTGCCAGCTCCACAAGTTAACAAACATTCCCCTAAATTCACCTGCGTGTGTCCTCAAGGTCAAACACTCGCCTCAGATGGCCTGCGCTGCAGACCAGAGGCATCTACTGCCGCCCCTCGAGATGTGGGGAGGGTGACCTCTCACCCCAGTCACCCTAAAGcttcCGCAATACCGAAGGTTTCCTCTGAACCAGTTCGGGCTGaaggAAACATAAGCACGTCCATACATGAAGTAAATTCATCAGCTAAAGGATCTGCTGCAGCCTGGGCTATTCTACCTGTGTTGCTATTAGCCATGGCTGCAGCCGGTGGTTACTTAATGTGGCGCAACTGGCAGATCAAAAATAAGAAGAGCATGAACTTCGATAATCCAGTATATTTGAAGACCACAGAGGAAGACCTCAATATCGATATCAGCAGACACAGCGCTTCTGTAGGCCACACGTACCCTGCTATTTCGATGGTAAACACAGAAGATGACTTGTCATAACCCAAGCCCCCACAATGCTCCAGTTTATATACTAGCCACTTGGCACCAATGGCAACTGCTGCGGTTTCACAACCAGCTGCCTTCTGAAGTGCAtttccaagtttttttttttttttttttttttctcctctgtctctccaaTAAGAGGATGTCATTTGTGGTACGAGAACGTATTTGCACCCTACTTGCGCTGTGTGTGCTCAAAGCATCAAGGAAATCTGATGGCCTGGGGTTTTTTTACCTTCACATACACCATAATAGCCCCAAAATGATTCAACAGCCTTAATTCCTATTTACAAGGATGACGGCATAGCTGGACCCAGAATGCAGCTTAGATGGCCAGTAGTGTGTGTGGACacctgaaatatttaaatgaaaatgcatattttagatGACCATGTCTTTAAAGTGtaagtttcttttgttttcctaATGGACCCTGTTTCCCAGAGATGCATTAATTACGAAGCTTCGTGTGTCTTTCTGGATTTGAAAAGGCTCTATTGGGAAACGTGCTGTTACGACATTTGTAAAACATTGTATATATCCCTCTCTGGAAAACATAATCAGGATTCCTCAAGCACTTTGATCAAATGTTCCTCTGTAAATAAGATTGTATACATTTGACTGAGACAATTTTGTTATGGTTGGGCACTGTACCAGGGTAgaggaaaatgtatttaaaaaatgaagtttgttaaaactattttgtatgtttgtgtgctgttCCTGTGACCTTTTTATAGCAGTGTGCAGGGGAACAAAATGCTCTGTATTGTGAAAGGAAACATTTGCaaacgtaaaataaaattaaagtttaaaattaa
>XM_043250208.1
ACGGCGCGCGAAGGGCAGGTTCGTCGGATGAAGTGGTACAGAAAGGGTTAACGGCGTGTAAATGACATGTTGAAGGAGAAAAAAACGCGCCTGCGTTCGGCGGTGCTTATTCGCTGCAGGTTCACGCTATCAGTAAATTAGGAAATGGATTGCGGTTCCGCGAGCGCTTCGCGTGCGTGGAGAGACTAACCGGGGAGCTGcctgaatgaaataaaagcccGCGGTACACGCTGCTTTCTGTTTGTCCCGCGAAGACGTGTCTGCCCGCTGCGCTACAATATCAGGGACGAGGCCACAGACGGACACGGCGTTCAGCTCCCCGACGCGAAATGGTCACGTCTATTCTGTGGCTCCTCATTCTGCCGGtgtgtcttcagctgtgtggaTTTTCGCGCGCTTCCCGAACAGAATGTGAGCAGTCCCAGTTCCAGTGTGGGAACGGCCGGTGCATCCCGTCTGTGTGGCAGTGCGACGGAGACCTGGACTGCTCGGACGGGAGCGACGAGACGTCCTGCGTGAGGAAGACCTGCGCCGAGGTGGACTACGTCTGCCGCAGTGGACAGTGTATTCCCAAGAGATGGCAGTGCGACGGAGAACCAGACTGCGAGGACGGCTCAGACGAGAGCATCGAAATGTGCCACACGAGGACCTGCCGAGTGAACGAGTTCAGCTGTGGCGTCGGCTCCACACAGTGCATTCCCGTCTTCTGGAAGTGTGACGGTGAGAAGGACTGCGACAACGGAGAGGACGAGATTAACTGTGGTAACATTACATGCGCTCCTCTGGAGTTCACCTGTGCCAGCGGCCGCTGCGTTTCTCGTAATTTCGTCTGTAACGGCGAGGACGACTGCGGGGACGGCAGCGACGAACAGGACTGCGCTCCTGCTTCCTGCGGCCCGAGTGAAGTCCCTTGTGGAAATAATACCTGCATTCCTAGAAGCTGGCTGTGCGATGACGATGTGGACTGCCAGGACCAATCGGACGAGTCGCCAGAGCGCTGCGGGCGCAACCCCACCCCGCCAGCGAAGTGCTCTCCCAGCGAGATGCAGTGCAGTTCTGGGGAATGCATACACAGGAAGTGGCGCTGTGACGGGGATCCAGACTGCAAGGACGGCAGCGACGAGAAAAACTGCTCTGCCCGTACCTGCAGGCCCGACCAGTTCAAGTGTGATGACGGCAGCTGTATCCATGGCAGCCGACGGTGCAATAGCTTCCGAGATTGTGCAGACGGCACAGATGAAGTCAACTGCAAAAACTTAACTCAGTGTAACGGCCCTGACCAGTTCAAGTGCCGGAGTGGAGAGTGTATTGAGATGAGTAAGGTGTGTAATAAAGCCCGTGACTGTCCTGACTGGAGTGATGAACCCATCAAAGAGTGCAATATGAATGAATGCCTGCTCAATAACGGAGGCTGCTCGCACATCTGCCGCGACCTAACGATTGGCTACGAGTGCGACTGCACGCCAGGACTCCAGCTCATCGATCGCAAGACCTGCGGTGATGTCAATGAGTGCCTCAACCCTGGTATATGCAGTCAAATATGTATAAATCTTAAAGGAGGATACAAATGTGAGTGTCACAATGGCTACCAGATGGACCCCACGACTGGAGTTTGCAAGGCTGTAGGTAAAGAGCCCTGTCTTATTTTCACCAATCGAAGAGACATCCGTAAACTAGGACTGGAGCGGAGAGAATATACTCAGATTGTGGAGCAGCTGCGGAACACAGTAGCTGTAGATGCTGACTTCGTTCAGCAAACAATATTCTGGGCTGACCTGGGCCAGAAGGCAATTTTTAGcACAGTGTTAGATAAGCAAGAGGCAAGCCATATGAAAGTGATTGACAACGTTCAGATGCCTGTTGGGATTGCAGTGGACTGGATTTACAAAAACATCTACTGGTCAGACCTAGGCAGTAAGAATATAGCAGTGGCCAATTTTAATGGGACTAGGAGGAAGGTACTGTTTAACAGCGGCCTGAAGGAACCAGCCTCTATTGCTGTAGATCCTCTATCAggGTTCCTGTATTGGTCGGACTGGGGTGAGCCTGCTAAGATTGAGAAGTCTGGTATGAATGGGATTGACAGACAGGTCCTAGTAGAGACAGACATTCAGTGGCCCAATGGAATCACTCTCGATCTGATCAAGGGCCGACTCTACTGGGTGGATTCAAAGCTGCACATGCTTTGTAGTGTAGACTTGAATGGAGACAACCGCCGGAAGGTGCTGCAGTCACCAGACTACCTTGCCCACCCTTTCGCCCTTACTGTTTTTGAGGATCGAGTGTTCTGGACAGATGGTGAGAATAAGGCAATCTACGGTGCAAACAAGTTCACAGGATCTGATGTAACTCTGCTTGCCAGCAACCTCAATGAAGCCCAAGACATCATTGTGTACCATGAGCTAATTCAGCTGTCTGGGACCAACTGGTGTAACGAGAAGGTGGAGAATGGAGGCTGTTCCTTCATGTGTCTGCCAGCTCCACAAGTTAACAAACATTCCCCTAAATTCACCTGCGTGTGTCCTCAAGGTCAAACACTCGCCTCAGATGGCCTGCGCTGCAGACCAGAGGCATCTACTGCCGCCCCTCGAGATGTGGGGAGGGTGACCTCTCACCCCAGTCACCCTAAAGaaggAAACATAAGCACGTCCATACATGAAGTAAATTCATCAGCTAAAGGATCTGCTGCAGCCTGGGCTATTCTACCTGTGTTGCTATTAGCCATGGCTGCAGCCGGTGGTTACTTAATGTGGCGCAACTGGCAGATCAAAAATAAGAAGAGCATGAACTTCGATAATCCAGTATATTTGAAGACCACAGAGGAAGACCTCAATATCGATATCAGCAGACACAGCGCTTCTGTAGGCCACACGTACCCTGCTATTTCGATGGTAAACACAGAAGATGACTTGTCATAACCCAAGCCCCCACAATGCTCCAGTTTATATACTAGCCACTTGGCACCAATGGCAACTGCTGCGGTTTCACAACCAGCTGCCTTCTGAAGTGCAtttccaagtttttttttttttttttttttttctcctctgtctctccaaTAAGAGGATGTCATTTGTGGTACGAGAACGTATTTGCACCCTACTTGCGCTGTGTGTGCTCAAAGCATCAAGGAAATCTGATGGCCTGGGGTTTTTTTACCTTCACATACACCATAATAGCCCCAAAATGATTCAACAGCCTTAATTCCTATTTACAAGGATGACGGCATAGCTGGACCCAGAATGCAGCTTAGATGGCCAGTAGTGTGTGTGGACacctgaaatatttaaatgaaaatgcatattttagatGACCATGTCTTTAAAGTGtaagtttcttttgttttcctaATGGACCCTGTTTCCCAGAGATGCATTAATTACGAAGCTTCGTGTGTCTTTCTGGATTTGAAAAGGCTCTATTGGGAAACGTGCTGTTACGACATTTGTAAAACATTGTATATATCCCTCTCTGGAAAACATAATCAGGATTCCTCAAGCACTTTGATCAAATGTTCCTCTGTAAATAAGATTGTATACATTTGACTGAGACAATTTTGTTATGGTTGGGCACTGTACCAGGGTAgaggaaaatgtatttaaaaaatgaagtttgttaaaactattttgtatgtttgtgtgctgttCCTGTGACCTTTTTATAGCAGTGTGCAGGGGAACAAAATGCTCTGTATTGTGAAAGGAAACATTTGCaaacgtaaaataaaattaaagtttaaaattaa
>XM_043250209.1
ACGGCGCGCGAAGGGCAGGTTCGTCGGATGAAGTGGTACAGAAAGGGTTAACGGCGTGTAAATGACATGTTGAAGGAGAAAAAAACGCGCCTGCGTTCGGCGGTGCTTATTCGCTGCAGGTTCACGCTATCAGTAAATTAGGAAATGGATTGCGGTTCCGCGAGCGCTTCGCGTGCGTGGAGAGACTAACCGGGGAGCTGcctgaatgaaataaaagcccGCGGTACACGCTGCTTTCTGTTTGTCCCGCGAAGACGTGTCTGCCCGCTGCGCTACAATATCAGGGACGAGGCCACAGACGGACACGGCGTTCAGCTCCCCGACGCGAAATGGTCACGTCTATTCTGTGGCTCCTCATTCTGCCGGtgtgtcttcagctgtgtggaTTTTCGCGCGCTTCCCGAACAGAATGTGAGCAGTCCCAGTTCCAGTGTGGGAACGGCCGGTGCATCCCGTCTGTGTGGCAGTGCGACGGAGACCTGGACTGCTCGGACGGGAGCGACGAGACGTCCTGCGTGAGGAAGACCTGCGCCGAGGTGGACTACGTCTGCCGCAGTGGACAGTGTATTCCCAAGAGATGGCAGTGCGACGGAGAACCAGACTGCGAGGACGGCTCAGACGAGAGCATCGAAATGTGCCACACGAGGACCTGCCGAGTGAACGAGTTCAGCTGTGGCGTCGGCTCCACACAGTGCATTCCCGTCTTCTGGAAGTGTGACGGTGAGAAGGACTGCGACAACGGAGAGGACGAGATTAACTGTGGTAACATTACATGCGCTCCTCTGGAGTTCACCTGTGCCAGCGGCCGCTGCGTTTCTCGTAATTTCGTCTGTAACGGCGAGGACGACTGCGGGGACGGCAGCGACGAACAGGACTGCGCTCCTGCTTCCTGCGGCCCGAGTGAAGTCCCTTGTGGAAATAATACCTGCATTCCTAGAAGCTGGCTGTGCGATGACGATGTGGACTGCCAGGACCAATCGGACGAGTCGCCAGAGCGCTGCGGGCGCAACCCCACCCCGCCAGCGAAGTGCTCTCCCAGCGAGATGCAGTGCAGTTCTGGGGAATGCATACACAGGAAGTGGCGCTGTGACGGGGATCCAGACTGCAAGGACGGCAGCGACGAGAAAAACTGCTCTGCCCGTACCTGCAGGCCCGACCAGTTCAAGTGTGATGACGGCAGCTGTATCCATGGCAGCCGACGGTGCAATAGCTTCCGAGATTGTGCAGACGGCACAGATGAAGTCAACTGCAAAAACTTAACTCAGTGTAACGGCCCTGACCAGTTCAAGTGCCGGAGTGGAGAGTGTATTGAGATGAGTAAGGTGTGTAATAAAGCCCGTGACTGTCCTGACTGGAGTGATGAACCCATCAAAGAGTGCAATATGAATGAATGCCTGCTCAATAACGGAGGCTGCTCGCACATCTGCCGCGACCTAACGATTGGCTACGAGTGCGACTGCACGCCAGGACTCCAGCTCATCGATCGCAAGACCTGCGGTGATGTCAATGAGTGCCTCAACCCTGGTATATGCAGTCAAATATGTATAAATCTTAAAGGAGGATACAAATGTGAGTGTCACAATGGCTACCAGATGGACCCCACGACTGGAGTTTGCAAGGCTGTAGGTAAAGAGCCCTGTCTTATTTTCACCAATCGAAGAGACATCCGTAAACTAGGACTGGAGCGGAGAGAATATACTCAGATTGTGGAGCAGCTGCGGAACACAGTAGCTGTAGATGCTGACTTCGTTCAGCAAACAATATTCTGGGCTGACCTGGGCCAGAAGGCAATTTTTAGcACAGTGTTAGATAAGCAAGAGGCAAGCCATATGAAAGTGATTGACAACGTTCAGATGCCTGTTGGGATTGCAGTGGACTGGATTTACAAAAACATCTACTGGTCAGACCTAGGCAGTAAGAATATAGCAGTGGCCAATTTTAATGGGACTAGGAGGAAGGTACTGTTTAACAGCGGCCTGAAGGAACCAGCCTCTATTGCTGTAGATCCTCTATCAggGTTCCTGTATTGGTCGGACTGGGGTGAGCCTGCTAAGATTGAGAAGTCTGGTATGAATGGGATTGACAGACAGGTCCTAGTAGAGACAGACATTCAGTGGCCCAATGGAATCACTCTCGATCTGATCAAGGGCCGACTCTACTGGGTGGATTCAAAGCTGCACATGCTTTGTAGTGTAGACTTGAATGGAGACAACCGCCGGAAGGTGCTGCAGTCACCAGACTACCTTGCCCACCCTTTCGCCCTTACTGTTTTTGAGGATCGAGTGTTCTGGACAGATGGTGAGAATAAGGCAATCTACGGTGCAAACAAGTTCACAGGATCTGATGTAACTCTGCTTGCCAGCAACCTCAATGAAGCCCAAGACATCATTGTGTACCATGAGCTAATTCAGCTGTCTGGGACCAACTGGTGTAACGAGAAGGTGGAGAATGGAGGCTGTTCCTTCATGTGTCTGCCAGCTCCACAAGTTAACAAACATTCCCCTAAATTCACCTGCGTGTGTCCTCAAGGTCAAACACTCGCCTCAGATGGCCTGCGCTGCAGACCAGcttcCGCAATACCGAAGGTTTCCTCTGAACCAGTTCGGGCTGaaggAAACATAAGCACGTCCATACATGAAGTAAATTCATCAGCTAAAGGATCTGCTGCAGCCTGGGCTATTCTACCTGTGTTGCTATTAGCCATGGCTGCAGCCGGTGGTTACTTAATGTGGCGCAACTGGCAGATCAAAAATAAGAAGAGCATGAACTTCGATAATCCAGTATATTTGAAGACCACAGAGGAAGACCTCAATATCGATATCAGCAGACACAGCGCTTCTGTAGGCCACACGTACCCTGCTATTTCGATGGTAAACACAGAAGATGACTTGTCATAACCCAAGCCCCCACAATGCTCCAGTTTATATACTAGCCACTTGGCACCAATGGCAACTGCTGCGGTTTCACAACCAGCTGCCTTCTGAAGTGCAtttccaagtttttttttttttttttttttttctcctctgtctctccaaTAAGAGGATGTCATTTGTGGTACGAGAACGTATTTGCACCCTACTTGCGCTGTGTGTGCTCAAAGCATCAAGGAAATCTGATGGCCTGGGGTTTTTTTACCTTCACATACACCATAATAGCCCCAAAATGATTCAACAGCCTTAATTCCTATTTACAAGGATGACGGCATAGCTGGACCCAGAATGCAGCTTAGATGGCCAGTAGTGTGTGTGGACacctgaaatatttaaatgaaaatgcatattttagatGACCATGTCTTTAAAGTGtaagtttcttttgttttcctaATGGACCCTGTTTCCCAGAGATGCATTAATTACGAAGCTTCGTGTGTCTTTCTGGATTTGAAAAGGCTCTATTGGGAAACGTGCTGTTACGACATTTGTAAAACATTGTATATATCCCTCTCTGGAAAACATAATCAGGATTCCTCAAGCACTTTGATCAAATGTTCCTCTGTAAATAAGATTGTATACATTTGACTGAGACAATTTTGTTATGGTTGGGCACTGTACCAGGGTAgaggaaaatgtatttaaaaaatgaagtttgttaaaactattttgtatgtttgtgtgctgttCCTGTGACCTTTTTATAGCAGTGTGCAGGGGAACAAAATGCTCTGTATTGTGAAAGGAAACATTTGCaaacgtaaaataaaattaaagtttaaaattaa
>XM_043250210.1
CGCGCGAAGGGCAGGTTCGTCGGATGAAGTGGTACAGAAAGGGTTAACGGCGTGTAAATGACATGTTGAAGGAGAAAAAAACGCGCCTGCGTTCGGCGGTGCTTATTCGCTGCAGGTTCACGCTATCAGTAAATTAGGAAATGGATTGCGGTTCCGCGAGCGCTTCGCGTGCGTGGAGAGACTAACCGGGGAGCTGcctgaatgaaataaaagcccGCGGTACACGCTGCTTTCTGTTTGTCCCGCGAAGACGTGTCTGCCCGCTGCGCTACAATATCAGGGACGAGGCCACAGACGGACACGGCGTTCAGCTCCCCGACGCGAAATGGTCACGTCTATTCTGTGGCTCCTCATTCTGCCGGtgtgtcttcagctgtgtggaTTTTCGCGCGCTTCCCGAACAGAATGTGAGCAGTCCCAGTTCCAGTGTGGGAACGGCCGGTGCATCCCGTCTGTGTGGCAGTGCGACGGAGACCTGGACTGCTCGGACGGGAGCGACGAGACGTCCTGCGTGAGGAAGACCTGCGCCGAGGTGGACTACGTCTGCCGCAGTGGACAGTGTATTCCCAAGAGATGGCAGTGCGACGGAGAACCAGACTGCGAGGACGGCTCAGACGAGAGCATCGAAATGTGCCACACGAGGACCTGCCGAGTGAACGAGTTCAGCTGTGGCGTCGGCTCCACACAGTGCATTCCCGTCTTCTGGAAGTGTGACGGTGAGAAGGACTGCGACAACGGAGAGGACGAGATTAACTGTGGTAACATTACATGCGCTCCTCTGGAGTTCACCTGTGCCAGCGGCCGCTGCGTTTCTCGTAATTTCGTCTGTAACGGCGAGGACGACTGCGGGGACGGCAGCGACGAACAGGACTGCGCTCCTGCTTCCTGCGGCCCGAGTGAAGTCCCTTGTGGAAATAATACCTGCATTCCTAGAAGCTGGCTGTGCGATGACGATGTGGACTGCCAGGACCAATCGGACGAGTCGCCAGAGCGCTGCGGGCGCAACCCCACCCCGCCAGCGAAGTGCTCTCCCAGCGAGATGCAGTGCAGTTCTGGGGAATGCATACACAGGAAGTGGCGCTGTGACGGGGATCCAGACTGCAAGGACGGCAGCGACGAGAAAAACTGCTCTGCCCGTACCTGCAGGCCCGACCAGTTCAAGTGTGATGACGGCAGCTGTATCCATGGCAGCCGACGGTGCAATAGCTTCCGAGATTGTGCAGACGGCACAGATGAAGTCAACTGCAAAAACTTAACTCAGTGTAACGGCCCTGACCAGTTCAAGTGCCGGAGTGGAGAGTGTATTGAGATGAGTAAGGTGTGTAATAAAGCCCGTGACTGTCCTGACTGGAGTGATGAACCCATCAAAGAGTGCAATATGAATGAATGCCTGCTCAATAACGGAGGCTGCTCGCACATCTGCCGCGACCTAACGATTGGCTACGAGTGCGACTGCACGCCAGGACTCCAGCTCATCGATCGCAAGACCTGCGGTGATGTCAATGAGTGCCTCAACCCTGGTATATGCAGTCAAATATGTATAAATCTTAAAGGAGGATACAAATGTGAGTGTCACAATGGCTACCAGATGGACCCCACGACTGGAGTTTGCAAGGCTGTAGGTAAAGAGCCCTGTCTTATTTTCACCAATCGAAGAGACATCCGTAAACTAGGACTGGAGCGGAGAGAATATACTCAGATTGTGGAGCAGCTGCGGAACACAGTAGCTGTAGATGCTGACTTCGTTCAGCAAACAATATTCTGGGCTGACCTGGGCCAGAAGGCAATTTTTAGcACAGTGTTAGATAAGCAAGAGGCAAGCCATATGAAAGTGATTGACAACGTTCAGATGCCTGTTGGGATTGCAGTGGACTGGATTTACAAAAACATCTACTGGTCAGACCTAGGCAGTAAGAATATAGCAGTGGCCAATTTTAATGGGACTAGGAGGAAGGTACTGTTTAACAGCGGCCTGAAGGAACCAGCCTCTATTGCTGTAGATCCTCTATCAggGTTCCTGTATTGGTCGGACTGGGGTGAGCCTGCTAAGATTGAGAAGTCTGGTATGAATGGGATTGACAGACAGGTCCTAGTAGAGACAGACATTCAGTGGCCCAATGGAATCACTCTCGATCTGATCAAGGGCCGACTCTACTGGGTGGATTCAAAGCTGCACATGCTTTGTAGTGTAGACTTGAATGGAGACAACCGCCGGAAGGTGCTGCAGTCACCAGACTACCTTGCCCACCCTTTCGCCCTTACTGTTTTTGAGGATCGAGTGTTCTGGACAGATGGTGAGAATAAGGCAATCTACGGTGCAAACAAGTTCACAGGATCTGATGTAACTCTGCTTGCCAGCAACCTCAATGAAGCCCAAGACATCATTGTGTACCATGAGCTAATTCAGCTGTCTGGGACCAACTGGTGTAACGAGAAGGTGGAGAATGGAGGCTGTTCCTTCATGTGTCTGCCAGCTCCACAAGTTAACAAACATTCCCCTAAATTCACCTGCGTGTGTCCTCAAGGTCAAACACTCGCCTCAGATGGCCTGCGCTGCAGACCAGaaggAAACATAAGCACGTCCATACATGAAGTAAATTCATCAGCTAAAGGATCTGCTGCAGCCTGGGCTATTCTACCTGTGTTGCTATTAGCCATGGCTGCAGCCGGTGGTTACTTAATGTGGCGCAACTGGCAGATCAAAAATAAGAAGAGCATGAACTTCGATAATCCAGTATATTTGAAGACCACAGAGGAAGACCTCAATATCGATATCAGCAGACACAGCGCTTCTGTAGGCCACACGTACCCTGCTATTTCGATGGTAAACACAGAAGATGACTTGTCATAACCCAAGCCCCCACAATGCTCCAGTTTATATACTAGCCACTTGGCACCAATGGCAACTGCTGCGGTTTCACAACCAGCTGCCTTCTGAAGTGCAtttccaagtttttttttttttttttttttttctcctctgtctctccaaTAAGAGGATGTCATTTGTGGTACGAGAACGTATTTGCACCCTACTTGCGCTGTGTGTGCTCAAAGCATCAAGGAAATCTGATGGCCTGGGGTTTTTTTACCTTCACATACACCATAATAGCCCCAAAATGATTCAACAGCCTTAATTCCTATTTACAAGGATGACGGCATAGCTGGACCCAGAATGCAGCTTAGATGGCCAGTAGTGTGTGTGGACacctgaaatatttaaatgaaaatgcatattttagatGACCATGTCTTTAAAGTGtaagtttcttttgttttcctaATGGACCCTGTTTCCCAGAGATGCATTAATTACGAAGCTTCGTGTGTCTTTCTGGATTTGAAAAGGCTCTATTGGGAAACGTGCTGTTACGACATTTGTAAAACATTGTATATATCCCTCTCTGGAAAACATAATCAGGATTCCTCAAGCACTTTGATCAAATGTTCCTCTGTAAATAAGATTGTATACATTTGACTGAGACAATTTTGTTATGGTTGGGCACTGTACCAGGGTAgaggaaaatgtatttaaaaaatgaagtttgttaaaactattttgtatgtttgtgtgctgttCCTGTGACCTTTTTATAGCAGTGTGCAGGGGAACAAAATGCTCTGTATTGTGAAAGGAAACATTTGCaaacgtaaaataaaattaaagtttaaaattaa

Function

symbol description
vldlr Predicted to enable calcium ion binding activity and very-low-density lipoprotein particle receptor activity. Predicted to act upstream of or within cholesterol metabolic process; endocytosis; and lipid transport. Predicted to be located in clathrin-coated pit. Predicted to be integral component of membrane. Predicted to be part of very-low-density lipoprotein particle. Is expressed in several structures, including axis; brain; pronephric duct; retinal ganglion cell layer; and spinal cord interneuron. Human ortholog(s) of this gene implicated in Alzheimer's disease; cerebellar ataxia, mental retardation and dysequlibrium syndrome; and dementia. Orthologous to human VLDLR (very low density lipoprotein receptor).

NR:

description
PREDICTED: very low-density lipoprotein receptor isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K20053 VLDLR; very low-density lipoprotein receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250207.1 True 3789 mRNA 0.49 20 2086121 2105289
XM_043250208.1 False 3745 mRNA 0.49 19 2086121 2105287
XM_043250209.1 False 3724 mRNA 0.49 19 2086121 2105287
XM_043250210.1 False 3678 mRNA 0.49 18 2086121 2105283

Neighbor

gene id symbol gene type direction distance location
kcnv2a kcnv2a,kcnv2,LOC107726563,LOC107667263,LOC107558705,LOC107743156,LOC108428855 coding downstream 1931 2081915 ~ 2084190 (-)
trappc13 trappc13,LOC107667267,LOC107742971,LOC107705057,LOC107726564 coding downstream 13206 2063385 ~ 2072915 (-)
nln nln,LOC107667266,LOC107548669,LOC107705053,LOC107558702,LOC107743138 coding downstream 30064 2044162 ~ 2056057 (-)
erbin erbb2ip,LOC107667260,LOC107726559,LOC107705051,LOC107742960 coding downstream 42686 1978261 ~ 2043435 (-)
zfand5b LOC107705050,LOC107742939,LOC107726558,LOC107667265 coding downstream 109738 1969482 ~ 1976383 (-)
sh3bp2 sh3bp2,LOC107667261,LOC107705055,LOC107558670,LOC107743173,LOC106568140 coding upstream 1821 2107110 ~ 2124732 (-)
parm1 NA coding upstream 76506 2181795 ~ 2186043 (-)
si:dkey-88l16.3 LOC107667258,LOC107738845,LOC107743196,LOC107548646 coding upstream 93694 2198983 ~ 2228990 (-)
katnal2 katnal2,LOC102797751,LOC104955398,LOC107573073 coding upstream 246374 2351663 ~ 2360133 (-)
sigmar1 sigmar1,LOC107653128,LOC107573076 coding upstream 255479 2360768 ~ 2363564 (-)
LOC122353011 NA non-coding downstream 209369 1869993 ~ 1876752 (-)
G74149 NA non-coding downstream 217175 1867972 ~ 1868946 (-)
G74109 NA non-coding downstream 380444 1705098 ~ 1705677 (-)
G74110 LOC107558694,LOC107685106,LOC107658677,LOC107713304 non-coding downstream 383003 1702757 ~ 1703118 (-)
G74090 NA non-coding downstream 425558 1658534 ~ 1660563 (-)
LOC122352694 NA non-coding upstream 56855 2162144 ~ 2162704 (-)
LOC122352693 NA non-coding upstream 61102 2166391 ~ 2167347 (-)
LOC122352691 NA non-coding upstream 64030 2169319 ~ 2170549 (-)
G74317 NA non-coding upstream 65718 2171007 ~ 2174363 (-)
G74319 NA non-coding upstream 73917 2179206 ~ 2179433 (-)
adamts6 adamts6,LOC107744255,LOC107685101,LOC107713302 other downstream 239219 1774223 ~ 1846902 (-)
nrarpa nrarpa,nrarp other downstream 598113 1483399 ~ 1488008 (-)
G74031 NA other downstream 612243 1466751 ~ 1473878 (-)
G74058 NA other downstream 637235 1445323 ~ 1448886 (-)
si:dkeyp-41f9.4 NA other downstream 1198109 885156 ~ 888012 (-)
LOC122352692 NA other upstream 88796 2194085 ~ 2197429 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other upstream 611808 2717097 ~ 2767195 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other upstream 1232050 3337339 ~ 3377784 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other upstream 1496323 3601612 ~ 3607788 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other upstream 1800325 3905614 ~ 3912742 (-)

Expression


Co-expression Network