zfand5b (LOC107705050,LOC107742939,LOC107726558,LOC107667265)


Basic Information

Item Value
gene id zfand5b
gene name LOC107705050,LOC107742939,LOC107726558,LOC107667265
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1969482 ~ 1976383 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250260.1
CGTGACGTCACGGCCACTATTAAAGAAAACCAACAAACAGCGGCCagaaaaacacatatacacacacgccaGCGGACTAACAGCACGGCCCGTCGCCAAGGGTTTCATACAAAGTCTCTATATCGTGGGAGCTTCTCTTTTTACTCGGATAAGGAATCGCTCGTTTACGGAGAGATGGCCCAGGAGACCAATCAAAGCCCCGTGCCCATGCTCTGTGCCACCGGCTGCGGTTTCTACGGCAACCCTCGGACCAATGGCATGTGCTCGGTCTGTTACAAAGAGCATTTAACGCGGCAGAACAGCGGGGGAGTCAGTCCGATTAGCACAATGGCAGCTTCCAGCAGCGTCACCAGCAGTCCTACCTCCGAATCCTCAGCCATCCAGATCATCGAAGCTACGCTAAACAACTCCTCGTCTGCTAGCGCTAGTGCTGAATCACCCACCGCGACCGCTGCCCTCCCCGTTACACAACAGATGACGGAGATGAGCATTTCCTGCGAAGACGAGGTGGTCTCGCCTAAAGTAGAACTTCCTGAACCAGttgTCACTCAGCCGACAGCGTCCGCCGCTCCTCCGAGCACAGCTGAAGGTGACGAGACCAAAACACCTGACTTACCCAAACCCAAGAAGAACAGATGCTTCATGTGCCGCAAGAAGGTGGGCCTGACAGGGTTCGACTGTCGCTGTGGGAATCTCTTCTGTGGACTCCACCGCTACTCGGACAAGCACAACTGCCCCTACGACTACAAGGCCGAGGCTGCGGCCAAGATCCGCAAAGAGAACCCGGTGGTGGTGGCCGACAAGATCCAGAGAATATAAAGCTCTCGCCGTCCGCACCGCCACTTTGCGAGagatcagatccgaggactcgCACATTGACCTGTGACCCGAGagactagtttttttttaattacagtatggaaaagaaaatcatgtttctaagCCAGTGCATGAGTGATTACTTTGTTTCCatctttcttttgctttctgtTGTCGGTATGTGAGCTTCAAGTTAAAACAAATGGGggggaatttaaaaaaaaaaggtaaaaaaaaaaagaatgcctGTAAAAGAAGCCAGAGACATCTGCCTACCGTGTCTGTTTCTGAGTGGAACCCGTGCTGTAATCTGGAGTCTGGTTGTCATTAGTTTCCTCTGTGATGTGTCTCCCGGTCGGACTCTGAAGAGCGCCGTCAGAGCAGCGGTGCATGGCTGGCTCATGTAGCAAAAGGACGTTCTGTTTCCTCGGGGTGGAGTCGGCCGTTACCACATCTATCAGCCGTCTTTCTGTCGGAGGGATGCTGGGGCTTCCCCGTCATTCAGCTGtcttcaaaatgatttttaaaccATTGACAGACTTTGTGAAAAATGTTATCCGATTTGGGATGGTTTAATCCAGCAGCCAGACCGGAATGCTTTCATGATCAATTTTGAGCGACTGCATCCATGATACCCTGTCAAGTTCAGATGAGGTTGGACGTGGCAACAACATAAAACCGTTTATTCATTCTCCCACATGATCCATTTAAGtgaattgaatattttttttttattttggttggtTTGTAATGTGACGCCGGTTTGATTTCTGGGCTTGTTCTGAGGGCTTGTTGGGTTTAAAGTGGGTGTTTTGCATGGTTAGTGAAATGAGTATTTTACAGTTGATTGCATATTAGAAgtccatttctttttctttttttttcctgtctttctGCTAATTCACTTTTCTCGTGTGAGTGATCTTTTCAGTGGGTATTGAGTGTTAAATGCTGGTAAGAATAATGGTATTGTTTCGTGTCATTAATCAGTCTTTACGCCTGCTTGAGTGTTGTATGTCAGTCCACATCTTTTTCATCCGAGgctcagtttgttttttttaggtctGGCTGCACAgcgctgttttattttagagctTTGTGAGTTTACAGTAAAACTAACCATCTGTTCGGAATTGATTTTTAGTTATGCAAGTTTGTACAAaccatctttatttattatatgtattgcGCATATAATCTTGTTACCCAACATTACTGCAAAATTGtatcatgtaaataaaattatgtacaGAGATATCATTAAAA
>XM_043250261.1
CGTGACGTCACGGCCACTATTAAAGAAAACCAACAAACAGCGGCCagaaaaacacatatacacacacgccaGCGGACTAACAGCACGGCCCGTCGCCAAGGGTTTCATACAAAGTCTCTATATCGTGGGAGCTTCTCTTTTTACTCGGATAAGGAATCGCTCGTTTACGGAGAGATGGCCCAGGAGACCAATCAAAGCCCCGTGCCCATGCTCTGTGCCACCGGCTGCGGTTTCTACGGCAACCCTCGGACCAATGGCATGTGCTCGGTCTGTTACAAAGAGCATTTAACGCGGCAGAACAGCGGGGGAGTCAGTCCGATTAGCACAATGGCTTCCAGCAGCGTCACCAGCAGTCCTACCTCCGAATCCTCAGCCATCCAGATCATCGAAGCTACGCTAAACAACTCCTCGTCTGCTAGCGCTAGTGCTGAATCACCCACCGCGACCGCTGCCCTCCCCGTTACACAACAGATGACGGAGATGAGCATTTCCTGCGAAGACGAGGTGGTCTCGCCTAAAGTAGAACTTCCTGAACCAGttgTCACTCAGCCGACAGCGTCCGCCGCTCCTCCGAGCACAGCTGAAGGTGACGAGACCAAAACACCTGACTTACCCAAACCCAAGAAGAACAGATGCTTCATGTGCCGCAAGAAGGTGGGCCTGACAGGGTTCGACTGTCGCTGTGGGAATCTCTTCTGTGGACTCCACCGCTACTCGGACAAGCACAACTGCCCCTACGACTACAAGGCCGAGGCTGCGGCCAAGATCCGCAAAGAGAACCCGGTGGTGGTGGCCGACAAGATCCAGAGAATATAAAGCTCTCGCCGTCCGCACCGCCACTTTGCGAGagatcagatccgaggactcgCACATTGACCTGTGACCCGAGagactagtttttttttaattacagtatggaaaagaaaatcatgtttctaagCCAGTGCATGAGTGATTACTTTGTTTCCatctttcttttgctttctgtTGTCGGTATGTGAGCTTCAAGTTAAAACAAATGGGggggaatttaaaaaaaaaaggtaaaaaaaaaaagaatgcctGTAAAAGAAGCCAGAGACATCTGCCTACCGTGTCTGTTTCTGAGTGGAACCCGTGCTGTAATCTGGAGTCTGGTTGTCATTAGTTTCCTCTGTGATGTGTCTCCCGGTCGGACTCTGAAGAGCGCCGTCAGAGCAGCGGTGCATGGCTGGCTCATGTAGCAAAAGGACGTTCTGTTTCCTCGGGGTGGAGTCGGCCGTTACCACATCTATCAGCCGTCTTTCTGTCGGAGGGATGCTGGGGCTTCCCCGTCATTCAGCTGtcttcaaaatgatttttaaaccATTGACAGACTTTGTGAAAAATGTTATCCGATTTGGGATGGTTTAATCCAGCAGCCAGACCGGAATGCTTTCATGATCAATTTTGAGCGACTGCATCCATGATACCCTGTCAAGTTCAGATGAGGTTGGACGTGGCAACAACATAAAACCGTTTATTCATTCTCCCACATGATCCATTTAAGtgaattgaatattttttttttattttggttggtTTGTAATGTGACGCCGGTTTGATTTCTGGGCTTGTTCTGAGGGCTTGTTGGGTTTAAAGTGGGTGTTTTGCATGGTTAGTGAAATGAGTATTTTACAGTTGATTGCATATTAGAAgtccatttctttttctttttttttcctgtctttctGCTAATTCACTTTTCTCGTGTGAGTGATCTTTTCAGTGGGTATTGAGTGTTAAATGCTGGTAAGAATAATGGTATTGTTTCGTGTCATTAATCAGTCTTTACGCCTGCTTGAGTGTTGTATGTCAGTCCACATCTTTTTCATCCGAGgctcagtttgttttttttaggtctGGCTGCACAgcgctgttttattttagagctTTGTGAGTTTACAGTAAAACTAACCATCTGTTCGGAATTGATTTTTAGTTATGCAAGTTTGTACAAaccatctttatttattatatgtattgcGCATATAATCTTGTTACCCAACATTACTGCAAAATTGtatcatgtaaataaaattatgtacaGAGATATCATTAAAA

Function

NR:

description
AN1-type zinc finger protein 5

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250260.1 True 2085 mRNA 0.46 5 1969482 1976383
XM_043250261.1 False 2082 mRNA 0.46 5 1969482 1976383

Neighbor

gene id symbol gene type direction distance location
apba1b LOC107667257,LOC107558696,LOC107705048,LOC107548674,LOC107742885 coding downstream 29485 1928874 ~ 1939997 (-)
trim23 trim23,LOC107658681 coding downstream 107427 1854090 ~ 1862055 (-)
srek1ip1 srek1ip1,LOC107558662,LOC107685105,LOC107713259,LOC107658680,LOC107744254 coding downstream 245359 1722599 ~ 1724123 (-)
LOC122352616 plac8.1 coding downstream 248163 1719875 ~ 1721319 (-)
plac8.2 plac8 coding downstream 252142 1715412 ~ 1717340 (-)
erbin erbb2ip,LOC107667260,LOC107726559,LOC107705051,LOC107742960 coding upstream 1878 1978261 ~ 2043435 (-)
nln nln,LOC107667266,LOC107548669,LOC107705053,LOC107558702,LOC107743138 coding upstream 67779 2044162 ~ 2056057 (-)
trappc13 trappc13,LOC107667267,LOC107742971,LOC107705057,LOC107726564 coding upstream 87002 2063385 ~ 2072915 (-)
kcnv2a kcnv2a,kcnv2,LOC107726563,LOC107667263,LOC107558705,LOC107743156,LOC108428855 coding upstream 105532 2081915 ~ 2084190 (-)
vldlr vldlr,LOC107705052,LOC107548665,LOC107558669,LOC107667264 coding upstream 109738 2086121 ~ 2105289 (-)
LOC122353011 NA non-coding downstream 92730 1869993 ~ 1876752 (-)
G74149 NA non-coding downstream 100536 1867972 ~ 1868946 (-)
G74109 NA non-coding downstream 263805 1705098 ~ 1705677 (-)
G74110 LOC107558694,LOC107685106,LOC107658677,LOC107713304 non-coding downstream 266364 1702757 ~ 1703118 (-)
G74090 NA non-coding downstream 308919 1658534 ~ 1660563 (-)
LOC122352694 NA non-coding upstream 185761 2162144 ~ 2162704 (-)
LOC122352693 NA non-coding upstream 190008 2166391 ~ 2167347 (-)
LOC122352691 NA non-coding upstream 192936 2169319 ~ 2170549 (-)
G74317 NA non-coding upstream 194624 2171007 ~ 2174363 (-)
G74319 NA non-coding upstream 202823 2179206 ~ 2179433 (-)
adamts6 adamts6,LOC107744255,LOC107685101,LOC107713302 other downstream 122580 1774223 ~ 1846902 (-)
nrarpa nrarpa,nrarp other downstream 481474 1483399 ~ 1488008 (-)
G74031 NA other downstream 495604 1466751 ~ 1473878 (-)
G74058 NA other downstream 520596 1445323 ~ 1448886 (-)
si:dkeyp-41f9.4 NA other downstream 1081470 885156 ~ 888012 (-)
LOC122352692 NA other upstream 217702 2194085 ~ 2197429 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other upstream 740714 2717097 ~ 2767195 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other upstream 1360956 3337339 ~ 3377784 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other upstream 1625229 3601612 ~ 3607788 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other upstream 1929231 3905614 ~ 3912742 (-)

Expression


Co-expression Network