ror2 (ror2,LOC107702585,LOC107683466)


Basic Information

Item Value
gene id ror2
gene name ror2,LOC107702585,LOC107683466
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3709666 ~ 3767673 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250336.1
TACTCGTTCGCTTTTCTATTAGGAGACTTCGGGACACTTGAACGGGATCAACGGCGGTCGACGAACACCTTTCGATTGAGCGGGATGAAACGCGTTATTCTTTTGCAAACGAACCGTCAAAAAGAGTTTAATTCACTGCACACTTGAGACAAAACGCGCTTTGTTCGCACGCGCAAACTTGCTTATCACTTGTGGAGCGGTCTGGAAGTTTAAACGCACAGATTCCCAAAATCCAGCCGCATCAGAGGAGCGTTCCCAGTAAGGATGTACACACTGAGGATTACAAGCAGAACTCATCTGTTGCTCATATCCATCCTCCTCacaacattcacacacacagCGGCTGACGTGAACCTGTCGGAGTCTGGAGAGATCGAGGCTGTAGCAGAGGCCCAGAGCGGAGGACTGCCAACAGCTGAAGGTTATTTCCTGGAATTTGTGGAGCAGCCAAACAATATGACTATAGTGCAGGGGCAGACGGTCACTTTACACTGCAAAGTGGCCGGTCACCCACGGCCCAGCATCCGCTGGCTCAAGAACGATGCCCCGGTGGTGCAGGAGCAGGGCCGAGTCTCCATCCGCAAGACAGAGGCTGGATCTAAGCTCCGCATTCAAGACCTGGACACCACAGACACCGGATACTACCAGTGTGTAGCTTCAAACTCCATCAAGGTCATTTCAGCTACTGGAGTGCTTTATGTGCGGCTGGGGAGTGGAGGACAGTCCCCGGCCCATGGAGGAGAAGACTCAACGCACGAGAAGGGCTTCTGCCAGCCGTACCGCGGCATTGCGTGCGCTCGCTTCATAGGAAACAGGAGCATCTATGTGGAGTCTCTGCAGATGCAGGGAGAAAGTGAAAACCGCATCACTGCTGCCTTCACGATGATCGGCACCTCAACCCAGCTATCAGACCAGTGCTCTGAATTTGCCATCCCGTCCTTCTGCTATTACGTCTTCCCTTTGTGCGAGGAGGGCACTAGAGGTCCACGGCGGCGCCAGCTGTGCCGTGACGAGTGCGAGGCTCTGGAGAACGACTTGTGCAATACAGAGTACACCATCGCACGCTCCAACCCTCTCATCCTCATGCAGCTGGAGCTGCCCGCGTGCAACCTGCTTCCCCACCCCGGCTCGCCAGAAGCTGCCAGCTGCATCCGCATCGGCCTGCCGCCGCAATATTCGCCCCCAAATCACAGCTGTTACAACGGAAGTGGCGCCAACTACAAAGGCACGGTCAGCGTCACGAAATCAGGCTACCAGTGCCAGCCGTGGAGCGCACAGTATCCACACAGTCATCATCTGACACCCGTTGAGTACCCTGAGCTCAGAGGAGGCCACAATTTCTGCAGGAACCCTGGCGGGCAAATGGAGAGCCCTTGGTGCTTCACTTTGGACCCTCATGTTAGAGTGGACGTCTGTGACATTCAGCCCTGCAAGCCaccacagaaaatgaaaaaggagATACTGTACATCCTAATCCCCAGTATAGCCACCCCTCTAGTTATTGCCTGCTTATTCTTCTTGATCTGCATGTGCCGCAACAAACAGAAGGAGTCTGCTGACACCCCCACTCGCCGGCAGCTCACTGCCTCACCGAGTCAAGAAATGGAGCTGCCTTTACTTAACCAGCACAAGCATCAGGCGAAGCTTCGAGAACTCAACCTGTCTGCAGTCCGGTTCATGGAAGAGCTTGGAGAGGACCGTTTCGGAAAGGTCTACAAAGGTCACCTCTACGGTACGGCTCCAGGTGAACAGACCCAGGTGGTGGCTATAAAGACGGTCAAAGACAAGGACGAGGGACCCCTACGGGAAGAATTTCGCCACGAGGCCATGCTCCGGTCCCGCTTACAGCACCCCAACATCGTCTATCTTCTGGGTGTGATAACGAAAGAACAGCCCATGAGCATGATCTTCAGCTATTCGGGCCACGGTGACCTCCATGAGTTCCTGGTCATGCGATCCCCTCATTCAGACGTCGGCAGCTCTGATGACGATAAAACCGTTAAATCCACTCTGGAACAGGCAGACTTCCTTCACATTGTCACACAGATAGCGGCCGGGATGGAGTACCTCTCCAGCCACCACGTGGTACACAAGGATCTGGCTGCTCGTAACATTCTAGTCTGCGATAAACTCAACGTGAAGATCCTTGACCTTGGGTTGTTCAGAGAGGTCTACTCTGCTGACTACTACAAGCTAATGGGTACCAGTCCCTTCCCAATCCGTTGGATGTCCCCTGAAGCCATCTTGTATGGCAAGTTTTCCACCGATTCAGACATATGGTCCTACGGCGTGGTGCTATGGGAGATATTCAGCTATGGCCTTCAGCCGTACTGCGGCTATTCCAATCAGGACGTGATTGAGATGGTTCGCAACAGACAAGTCCTTTCCTGCCCAGATGACTGTCCAGCCTGGATTTACACACTGATGCTAGAGTGCTGGAATGAGTTCCCTGCAAGAAGGCCAAGATTCAAAGACATTCACGCCCGGTTGCGCACCTGGGAAAGCTTGTCTAACTACAACAGCTCGGCTCAGACCTCAGGAGCGAGCAACACCACTCAAACCAGCTCTCTCAGCACAAGCCCCGTCAGCAACATCAGCAATGCTCGCTATGTCAGTCCCAAAAAGTCTTCCCCGTTTCCCCAGCCTCAGTTTGTACCCATGAAGGGCCAGATGCGCCCGATGGTGCCTCCTCAGCTCTACATCCCAGTCAACGGCTACCAGCCAATGCCGGCTTATCCATACATGCAGAACTTCTACCCCATGCAGATCCCAATGCAGATGCCTCCACAGCAGCTGCATCCACAGCTGGTCGCCAAGGCTGGATCGCATCACAGTGGTAGTGGATCCACCAGCACCGGCTATGTGACCACAGCACCCTCAAACGGATCTGGTACGGAGAAGGCGGCCCTTATGAACGAAGACCTGAAAGCGGCGGAGGAGGATTTCGCTGACGGAGCCTCTCAAAGTGGCCTGCACAACGAGGACCTTTCTGTTCCAGAGACAGAACTCCTGGGGGACAACGACAGCCCACAGACCAAGGACAATGAAATCAACTTGGAAGTGTAGATGATCTGTTTAGATTGGTTAGATgagaagaatatttttttttaagtttttctcAGTTGTACAGGTTTAAAAAGTGAAGGGAAACCAGTGAATGACACATGAACTGGTGTTATTTatgggttttttgttttatcagcaGCCACTGATGGACGAACGCATCATGCTGTTGGgagatatttttataaaaaatgtcagCTTCACCCATGAGCTGCAATTTGCATAATCTATGATGAAGAATCGAGCTTTCAGCCCTTCTGCTTTGGGGTCGGTAGCAGATGATACAGTGGAGGACATCTTGTTGGTTTGgttgttttaatcaaattgtTGCAAAGCTATTCAGAAGAATCAGTTCTTACTGTTGCTGTGCAACATGAAACATAATTTCAAGCATGTTGTGGGTACCATTCATTAGTGTAACCTCTTCTCAGTTGGTGGTGTCATTGAGAACAAGTCATTAATGGAGCCTTTAGGCACCACtggattaaatatatttcttgctTGAGGGCTTTGGTAAATGATATGCATGATGAAAACTCATCATGAATCACAATATTGGACTATAAACAATCTGGATGTGCAGAGACATGGATGCTGACCCCAGGACAtttgtgtccttttttttttttagaagttgCTTTTATAAAACTCCTGTTTGTAAAGATTTGTAATTTATGCCATTGATTCTCTTGaagatttgtaatgttttttgtcttattttgttTAGCCTGTAGTATTACTTTAAAGTCATACCAACCAGAAACGTGCTTACTTCCCAGTTTCTTTCTAACACACATTAACCATATATTTTGTTCATCCAGGCACCTGGAGAATAAAGTAATACGTAATATCATATTACTTGTGGGGTTTCCTTAGCTTGTGTGCGATCTAGACATTGGAAAGGCATTTTGCTAtgataatgtaattaaaatagcaCAATGGTGTATTTTATATGACTCATTATTTGTACTCGGTGAAAAATTAACTGAGTGAGTGATGTGTGCTGGTTCACGTTAACCAATGACTGTAAAGTAGGTGTTCTTGTTTCCCAAGAAAGGCGGGACCAAAGTAATAACTGATATATTCTCCACTTTTGGCAGGCAAACTGCAAATAATTTACACTTGCATACAGGGCTGACACGTATGCAGTAATACACGTTTGCCTGCTGAGATGTCAACAGGCGCTTGTTGCTCCACGCACGATGAACTGGCTAGCATCAGCGGTTTACGGAATGCCTATCAGTTTCACGCGGCACCCAGCCTCAGCTCAAACGGCTCAACTCGACGGAAAAGACAGTTTACGCCCGACGAGCAGAAAGACAGCAATTACTGGCTCAAGCGGACTCGTAACAACGAAGCAGCGAAGAGGTCTCGCCAGCGCAAGAGGATGGAGGAACATCTCCTGGAGTCGCGCGCCGTCGAGCTTCAGCGGGAAAACGACAAATTGAAGGCTGCGCTCTCTGCAGTCCATCGTCAGAGCAACCCGGTGGACGCTGCTGCTTTGGGGTTGCCCCTTGGACTGCCAAACGACTGTTACCCGCGCGGTTTCGCCGTTCCCGCAACCGTGTTGCCACTGCGCAGTCTGCCTCATTGCCCGTTTTCTGGTTGTTGTGAAACAGTACGTCCTGAAACCAACATTGCTCGCCCGGTTTTCGATTTGGCATCATATCCTTTGATTAAAAACTCCGCCGGTAATAATGCTACGAAATCCCCGCGCGTCAGTTTATTGGACGGTTATCGTCCAATGGGAAGGTACAGTCACGGAACGAACGCGTGCGCCGGCGGAGCGCACGCAGCTTTGGAGAATGGAAATGACTCGGCTCAAACGAGTCGCGGGCTGACGGAGGACAGAGACGCGTTGGTCAACCTGTCGCGCTGTTATTTTTCCAAAACATCATCTTCCGACAGGGCGCAAAATTACACGCGGCGGGCCGGACCGATCGGCGGCGAAACGCAAACGGCCTTTCAGCAGCGCGCGACCAAGCAGCCCGTTCTGCTGCCGCACAAACTGCGCTACAAAGCCGGTCGCGCAAGGTTTGCGTCCACGAACTTTCCATCTTGACGGAAACCCCAAAAAaggcagacatttttttttttatttctcattactGATGCGTTACTGGCTGTCGTGAAAAAGATTGTCGTTTTTATTGCATTCGTTTAATTGCTCacgtttaagtaaaaaaaaaaaatcacttaccTTGCACTGTGAATCTGTAGTTGTAATACCTCTTAAATAAAAGGTATTGTTTCTGCA

Function

symbol description
ror2 Enables protein heterodimerization activity. Acts upstream of or within convergent extension involved in gastrulation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be integral component of plasma membrane. Is expressed in brain and female organism. Human ortholog(s) of this gene implicated in autosomal recessive Robinow syndrome; brachydactyly type B1; and cleft palate. Orthologous to human ROR2 (receptor tyrosine kinase like orphan receptor 2).

NR:

description
tyrosine-protein kinase transmembrane receptor ROR2 isoform X2

GO: NA

KEGG:

id description
K05123 ROR2, NTRKR2; receptor tyrosine kinase-like orphan receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250336.1 True 5320 mRNA 0.50 9 3709666 3767673

Neighbor

gene id symbol gene type direction distance location
sptlc1 sptlc1,LOC107715883,LOC107720388,LOC107702586,LOC107683465,LOC107560407 coding upstream 1352 3697541 ~ 3708314 (+)
carm1l LOC107702592,LOC107715849,LOC107679043,LOC107573847 coding upstream 68805 3627167 ~ 3640861 (+)
LOC122352579 LOC107702598,LOC107715893,LOC107653494,LOC107732273 coding upstream 141169 3496746 ~ 3568497 (+)
LOC122352557 plppr1,LOC107750956,LOC107653496,LOC107702599,LOC107710008,LOC102776600 coding upstream 253879 3413925 ~ 3455787 (+)
LOC122352986 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 coding upstream 401316 3271890 ~ 3308350 (+)
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding downstream 1081 3768754 ~ 3772710 (+)
auh auh,LOC107720385 coding downstream 5837 3773510 ~ 3790180 (+)
ankrd55 ankrd55,LOC107702571,LOC107670032,LOC107737049 coding downstream 40341 3808014 ~ 3818485 (+)
il6st LOC107715880 coding downstream 53664 3821337 ~ 3834370 (+)
st8sia4 st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405 coding downstream 115586 3883259 ~ 3891247 (+)
LOC122353153 NA non-coding upstream 121772 3587363 ~ 3587894 (+)
G74392 NA non-coding upstream 928349 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 992909 2716522 ~ 2716757 (+)
G74388 NA non-coding upstream 993374 2715379 ~ 2716292 (+)
G74387 NA non-coding upstream 994315 2715056 ~ 2715351 (+)
G74585 NA non-coding downstream 528 3768201 ~ 3768652 (+)
G74589 NA non-coding downstream 21084 3788757 ~ 3844512 (+)
G74596 LOC107715844 non-coding downstream 86643 3854316 ~ 3858952 (+)
G74626 NA non-coding downstream 124218 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 353191 4120864 ~ 4122658 (+)
cdc42se2 cdc42se2 other upstream 15070 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 41660 3663912 ~ 3668006 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other upstream 92150 3588244 ~ 3617516 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other downstream 245361 4013034 ~ 4120447 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other downstream 713594 4481267 ~ 4529002 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 1349193 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 1470606 5238279 ~ 5250137 (+)
G74965 NA other downstream 1489165 5256838 ~ 5258823 (+)

Expression


Co-expression Network