ak3 (ak3,LOC107658667,LOC107685112,LOC107744244,LOC107713310)


Basic Information

Item Value
gene id ak3
gene name ak3,LOC107658667,LOC107685112,LOC107744244,LOC107713310
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 1545460 ~ 1550935 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250341.1
CGGGCTTAATCCGGGAATAAAGCTGGAGCTGCGCGCGCGTGACAGAGAGAGGTCTCCGCATCCCATAAATCAGACTTCACAAGATGCAGTGAAGAGGACGCGTTTATTTGACTCCACGTTCACAAACAGCCATGGGTCTGCAGACTGTGTTCCGCGCGGTGATCATGGGGGCCCCGGGCTCGGGGAAGGGGACCGTGTCCGGCCGGATAGCGCAGAGTTTCGCGCTCAAGCATCTCTCCAGCGGAGACCTGCTGCGGGCCAACATCGAGGCCAAGACGGATCTGGGTCTCCTGATGAAGTCGTGCATCGATCAGGGTCAGCTGGTTCCCGATGACGTCATCTCCCGTCTCATCCTGTCCAGTCTGAGGGGTCTGGAGCAGAGCGGCTGGCTGCTGGACGGGTTTCCTCGTACCGTGGCTCAGGCCGAAGCCCTGGACAGCGTGTACGATGTGGACTCCGTCATAAACCTGGACGTGCCTTTCCGGACGATCCGCGAGCGCCTGACCTCTCGCTGGGTGCACCTTCCCAGCGGCAGGGTCTACAACACGGACTTCAACCCGCCTAAGAAACCAGGTTTCGATGACGTCACAGGAGAAGCGCTGGTCCAGAGAGATGATGACAGCCCTGAAACGGTGTCCAGGAGACTGAAGGACTACGAGAGACAGACACAGCCGGTTCTGGAGTACTACAGGAGTAAAGGAGCGTTGGAGACCTTCTCAGGAACCGAAACCAACAAGATATGGCCTCACGTTCATGCCTTCCTGAGCAGGAAAATCCCAGGAAAGCAGCAGGTTATGGGAAAAGCGTGATTGCACAACAGCCTTGAGGACTTTCACCACAGCTGAAGTACACTGTCGGACTCGAGCACAATGCACCTCTGTAGCCTTAAGCGGTCTGCTGTATTCGTCCAAGCCTTTGGTGTCACCATCTGGTTTTATGCCTTTGAAAGAAAGTTAGTGCCAAACTAGGTTTGTGGTTGAACTAGTCTATTACTGAGCTCCAGCGCTGTCAGCTTAAGGAAGTAAACCCAGCTTAGAGAGTTAGAAGTAGGCGTGCTAAGATTAATAGTTGACTCCAAAGTTAATAATTCTTAAATTTCCAGTTTGGAAAGCGCccaacccatttttttttttcttttcttttaaccGAAGTGGCTGCAAAGTGTGAACACGGCAGCTCTAACACATTCCAGTTTATTGTCCATAATGGCATTTTAATGCGCATACtagattcattttaacatttcgCAAATTAATGCATAGCAAAGTTACAATTCCAGCCTGATTTTTGAATgttctgacatttttttgtacGAAACCACCATGGCCTTAACTAGCAAAAAACTAATGATCAGTCTAATGACTGTGTGGTGATTTTTCTACTGCAGATCATAcgaatgttgatatttttgcaaatgcaaaataatgtatttttaattaaaaaagagtttgcacaataaataataaagggaAAGAAAATCTATAATGTGatcaaaattcataaaa

Function

symbol description
ak3 Predicted to enable adenylate kinase activity and nucleoside triphosphate adenylate kinase activity. Acts upstream of or within myeloid cell development. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial matrix. Is expressed in blood; brain; notochord; tail bud; and yolk syncytial layer. Orthologous to human AK3 (adenylate kinase 3).

NR:

description
GTP:AMP phosphotransferase AK3, mitochondrial-like

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004017 adenylate kinase activity molecular_function

KEGG:

id description
K00944 AK3; nucleoside-triphosphate--adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250341.1 True 1505 mRNA 0.48 5 1545460 1550935

Neighbor

gene id symbol gene type direction distance location
exd3 LOC107658665,LOC107685114,LOC107595558,LOC107713313 coding downstream 12802 1493595 ~ 1532658 (-)
dbh dbh,LOC107744238,LOC107658656,LOC107685164,LOC107713263,LOC107597665 coding downstream 140164 1388471 ~ 1405296 (-)
LOC122353188 strbp,LOC107744073,LOC107686417,LOC107713322,LOC107685126 coding downstream 343542 1117105 ~ 1201918 (-)
morn5 LOC107597617,LOC107685130,LOC107595543 coding downstream 575822 959605 ~ 969638 (-)
mrrf mrrf,LOC107686422,LOC107597620,LOC107713327,LOC107595542,LOC107685133 coding downstream 611394 919056 ~ 934066 (-)
ptbp3 LOC107658670,LOC107744247 coding upstream 41463 1592398 ~ 1649961 (-)
LOC122352375 inip,LOC107658659,LOC107558675,LOC107571239 coding upstream 136816 1687751 ~ 1688775 (-)
lin54 lin54,LOC107658675,LOC107685107,LOC107558659,LOC107744261 coding upstream 140220 1691155 ~ 1701070 (-)
LOC122353114 NA coding upstream 155333 1706268 ~ 1707951 (-)
plac8.2 plac8 coding upstream 164477 1715412 ~ 1717340 (-)
G74074 LOC107658666,LOC107744243,LOC107558687,LOC107595572,LOC107685113,LOC107713311 non-coding downstream 8966 1534739 ~ 1536494 (-)
G74071 NA non-coding downstream 49590 1495269 ~ 1495870 (-)
G74032 NA non-coding downstream 79592 1460000 ~ 1465868 (-)
G74056 LOC107597608,LOC107595554,LOC107713289,LOC107685121,LOC107658661,LOC107744258,LOC107744266 non-coding downstream 112527 1428014 ~ 1432933 (-)
G73996 NA non-coding downstream 213781 1251012 ~ 1331679 (-)
LOC122353052 NA non-coding upstream 2627 1553562 ~ 1557279 (-)
G74076 NA non-coding upstream 26541 1577476 ~ 1582603 (-)
G74092 NA non-coding upstream 40606 1591541 ~ 1660886 (-)
G74075 plac8 non-coding upstream 41239 1592174 ~ 1717319 (-)
G74090 NA non-coding upstream 107599 1658534 ~ 1660563 (-)
nrarpa nrarpa,nrarp other downstream 57452 1483399 ~ 1488008 (-)
G74031 NA other downstream 71582 1466751 ~ 1473878 (-)
G74058 NA other downstream 96574 1445323 ~ 1448886 (-)
si:dkeyp-41f9.4 NA other downstream 657448 885156 ~ 888012 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other downstream 751736 789423 ~ 793724 (-)
adamts6 adamts6,LOC107744255,LOC107685101,LOC107713302 other upstream 223288 1774223 ~ 1846902 (-)
LOC122352692 NA other upstream 643150 2194085 ~ 2197429 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other upstream 1166162 2717097 ~ 2767195 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other upstream 1786404 3337339 ~ 3377784 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other upstream 2050677 3601612 ~ 3607788 (-)

Expression


Co-expression Network