dhx29 (dhx29,LOC107744100,LOC107686439,LOC107713347,LOC107562543)


Basic Information

Item Value
gene id dhx29
gene name dhx29,LOC107744100,LOC107686439,LOC107713347,LOC107562543
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 521051 ~ 535959 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250438.1
CTAGTTTCAGTCTTCACGCGCTCTAGTGGAGTCCTGTTCGCTGCCTGACAGCGGGCTCTTCTTCACCGTTTCCCAGCTTCACGCGTTTCTTTGGTAGAGATGTGGTTTATTTAGCGCACTGATCAGTAAAACACGTTAGTTTTCGCGATGGGcgggaagaagaagaagtctgCAGCCTCAGCTCTGAACACAAACAGCGCAGAAACTGAACCCGGCGCCAAAAAACAGCCACAGAGAACAAATActgacaaagaaaacaaacccaGAGctccCAAAACATATAGTCTTAACAGTAACGCCCAGACTGACTCTGGCAGTGTGTCTGATAAATCAGTACTGAAGGTGGTTATCCGACCAGAACTGGAGAAGAAGGTGATCAAGTTAATTAATGAATACAGACAAGAACATGCAGACAAAGGACCGATATCTGGGAGACTCACCTCCAAGAAGTTGCTGGATTTATACACAGCGCTGCAGACGTTCCAGTTTAAGACGGAGCACATCGAGGAGGCCATGAAGAGCAGCACCCTGTACGGAGGAGACCTGCTCTCGGCGCTCGACTGGCTCTGTCTCAACCTCGGAGACGATGAGCTTCCGGAGGGATTCAGCCAAAAGATGCAGGAGGAGAAACAGAAGAGTCGGCCGAAGTTCCAGCCTCCTAAAGAAGACGAGAAACAGACGCTGAGCGAGAAAGAAGCGCCGGAACAGGAAGAGAAACCGAAGGCTAAGACTTCTGTAAAAGAGAGCGGAGACGGCGTGAAGGAGTGGATCCTGCGCTACGCCGAACACGCTGAAGATCAGAgcgaggaagaagaagaaaatgaagacCAGCACGCGAGTGCGTCTAACCCAGAGCCGGACCGGGCGTTCGATCCTAACGAGCGGTACCTGCTGCTGAGCGCTCAGATGAGCGACGCCAAGGACGCGGCGGCCGAGTCTAAAGCCAAGAGAGACCGAGCTGGACAGAGGACGGCGCAGGACCGCATCCGGGTCGTCCAGCAAGAAATGAAGTCTTTGGAGAGTCATCCGATGTTTAACCCGGCTCTTAAAGTCAAAGACGCTCCTAAAGAGGACAGGAAGCCGGTGGCTGTCCCCGACGGGAAAGACGAGCTCGACTTCAAGCTCTttgaacaaacacagacacctCCAGCACAAAAAGCTGAGAAGCAGAAGAAAGAGCCCAAAGACATCCGTGACTTTGACTACACATCGAGGAGCTGGACGGGCAAGTCTCCCAAACAGTTTCTGATTGATTGGTGCAGGAAGAACCTCCCGAAGAGTCCTCCTCCCTCCTTCCAGAAAGCTGCAGTCGGCAGATACTGGAAATGCAAAGTTCGTATCCAGAGGCCTAATGACGTTCTGGAGGTTTGCCCCACTATCCTGACCGAAGACGGCATGCAGGCCCAGCACTTAGGAGCCACGCTGGCTCTGTACAACCTGGTCAAAGGACAGTCTGTGCATCAGCTCCTGCCGCCCACCTACCGTGACGTGTGGCTCGAGTGGAGAGACGGCGAGCAAAAAGAAGAGGAGCAAACCCGCTCCGCCATCAACAAACCCCGGGACCAGTTCATCGCCCGCCTGCTGAGTTGTCTCAAACAGCAGCAGAGCCTCCGCCCGCAGGCCGAGCCGCAGGACCAGCTCCCCGACGCCGAGCCCGAGGACTCCTGGGAGAGCCTGGACACGCAGGAGGAGCCGGAGCCCCAGCGCGGAGCAGGCCTGGAGGCGCAGGAGGCCGCCCGGAAGCTGCTGCTCGCGCTGAGGACCTCGGCTCTGGCCCGCAGGCTGCTGACTGACCGAGAGCGGCTGCCCGTCTTCCAGCTCCGCCCGCAGCTGATGGAGGCCCTGCGCCGCCACAGAGTTCTGGTGATCGCCGGAGAGACCGGCAGCGGGAAGAGCACGCAGATCCCTCAGTTCATCCTGGAGCAGCTCCTGGCCGGCGGAGAGCCCTGCAGCGTGCTGGTCACTCAGCCCAGGAGGATCTCAGCCGTGAGTCTGGCCTGCAGGGTGTCGCAGGAGCTGGGGAGCGAGGACGGCCCGGGAGCCAAGAGGTCGCTGTGTGGATATCAGATCCGTATGGAGAACCGCTCGGGTGAATCCACACGACTGCTGTACTGCACCACCGGAGTTCTGCTGCGCAAACTACAGCAGGACCGGCTCCTCGGCTCCTTCACGCACATCATCGTGGACGAGGTTCACGAGCGGAGCGTCCAGTCAGACTTCCTCCTCACCATACTAAAAGAAGTGGTCCAGAAGCGCTCGGATCTGCGCTTGGTCCTGATGAGCGCCACCGTCGACTGTCAGAAGTTCGCCAACTACTTCAACCGCTGTCCTGTGGTCACCGTTCCCGGCAGGACCTTCCCTGTGGAGGTGTTTCACCTGGAGGATATCGTGGAGGAGACGGGTTACGTTCTGGAGCAGGACTCCGAGTACAGCCAGAGGTttgtggaggaggaggaggaggtcaGCATCAGCGTCACACAGAAGGGAGGAAAGACTCTTCAGCACCAGGAGCTGATAGCGAGGGACTCGGGCTCAGGCTGGGATCTGGGTCCAGAGCTGGATCACTTCAGCAGCCGGACGAGACGTGTCCTGCAGTACATGAACCCCAATAAGATAAACATGGATCTGATATTAGACCTGCTGGAATACCTGGATAAATCTCCTCAGTTTCGTGATGTGGACGGTGCAGTTCTGATCTTCCTCCCAGGCCTGGCTCATATTCAACAGCTGTATGATCTACTGACCAGCGACAAGAGGTTCGGCTCCAGGGACAGATACAAGCTGATCGCCCTCCACTCCACGCTGTCCTCTCAGGACCAGTCTTCGGCCTTCACGGTGCCCCCTGCTGGAGTCAGGAAGATCGTTCTGTCCACAAACATCGCTGAGACGGGCGTCACTATTCCTGACGTGGTCTTTGTGATCGACACCGGAAAGACTAAAGAGAatcggTATCACGAGAGCAGTCAGATGAGTTCTCTGGTGGAGACGTTTGTGAGTAAAGCCAGCGCTCTGCAGAGGCAGGGGAGAGCGGGACGGGTTCGACCGGGCTTCTGCTTCCGGCTTTATCCCAAATTCAGGTTTGACAGCTTCAATGATTACTCCATTCCTGAGATTCTCAGAGTGCCTTTGGAGGAGCTTTGCCTTCATATTATGaagTGTGATTATGGCTCTCCAGAGGACTTCCTGTGTCGAGCTCTCGATGCTCCTCAGCAGCAGGCTGTGTGTAACGCTGTGGGTCTGCTGAGGAAGATCGGTGCGTGTCATCATGACAGCCACACCCTCACACCGCTCGGACATCACTTAGCTGCTCTTCCTGTCAACGTCAAGATCGGCAAAATGCTCATCTTTGGCGCTATCTTCGGCTGCCTGGAACCCATAGCCACCATCGCAGCGGCCATGTCTGAGAAGTCTCCGTTCGTCACCCCTATGAGCAGAAAGGAGGAGGCCGATCTGGCTAAATCTGCTCTAGCAGTCGCAAACTCTGATCACGTGACCATCTACCGCGCTTACCTCGGGTGGAGGAGCTCTCGGAGCGAGGGGACGCGTGCGGAGACGGCCTACTGCCGGAGACACTTCCTGAGCCGCACTGCCCTCATGACCCTGGAGGATGTGAAGCAGGAGCTGATGAGGATGGTGGAGCAGGCTGGGTTCGTCTCCTCGAGGCGCGGCGCTGAAGCCAAGGCCCTGCGCTCTCCCTCCGAGCAGGACGTGTCCGTTCTCAAGGCGGTGCTGACGGCGGGTCTGTACGACAGCGTGGGTCGTGTCCTGAGCTCTCCCTCGCTGGACGTCCAGGAGCGGGTGGTGTGTGTGGTCGAGACGGCTCAGGGAAAAGCCCAGGTTCACCCCTCGTCCGTCAACCGCTTCCTGCAGACCCACGGCTGGCTGCTCTTCCAGGAGAAGGTGAAATACACCAAGGTGTTCCTAAGAGACACTACGCTGATCTCTCCGTTATCAATGCTGCTGTTCGGAGGAGATATCGACGTGCAGCACAGGGAGAGACTCATCTCTCTGGACGGATGGATCTACTTCCAGGCTCCAGTCAGAATCGGCGTGATCTTCAAACACCTTCGTAAACTGATCGACTCCCTCCTGGAGAGGAAATTGGCCAACCCCAAAATGAACTTGGAAGACGAGAAAACCATTCAAATCATTACAGAACTGATCAAGTCAGAAAACACGCTCTGAGGAAGTGGCTGCTGGTTTTACTGAAAGGGTGGCAAACCTCACTGAGGcgagaaaatgtaaattatattgcCAAAccagaataaaattattttaagaacaaa
>XM_043250439.1
CTAGTTTCAGTCTTCACGCGCTCTAGTGGAGTCCTGTTCGCTGCCTGACAGCGGGCTCTTCTTCACCGTTTCCCAGCTTCACGCGTTTCTTTGGTAGAGATGTGGTTTATTTAGCGCACTGATCAGTAAAACACGTTAGTTTTCGCGATGGGcgggaagaagaagaagtctgCAGCCTCAGCTCTGAACACAAACAGCGCAGAAACTGAACCCGGCGCCAAAAAACAGCCACAGAGAACAAATActgacaaagaaaacaaacccaGAGctccCAAAACATATAGTCTTAACAGTAACGCCCAGACTGACTCTGGCAGTGTGTCTGATAAATCAGTACTGAAGGTGGTTATCCGACCAGAACTGGAGAAGAAGGTGATCAAGTTAATTAATGAATACAGACAAGAACATGCAGACAAAGGACCGATATCTGGGAGACTCACCTCCAAGAAGTTGCTGGATTTATACACAGCGCTGCAGACGTTCCAGTTTAAGACGGAGCACATCGAGGAGGCCATGAAGAGCAGCACCCTGTACGGAGGAGACCTGCTCTCGGCGCTCGACTGGCTCTGTCTCAACCTCGGAGACGATGAGCTTCCGGAGGGATTCAGCCAAAAGATGCAGGAGGAGAAACAGAAGAGTCGGCCGAAGTTCCAGCCTCCTAAAGAAGACGAGAAACAGACGCTGAGCGAGAAAGAAGCGCCGGAACAGGAAGAGAAACCGAAGGCTAAGACTTCTGTAAAAGAGAGCGGAGACGGCGTGAAGGAGTGGATCCTGCGCTACGCCGAACACGCTGAAGATCAGAgcgaggaagaagaagaaaatgaagacCAGCACGCGAGTGCGTCTAACCCAGAGCCGGACCGGGCGTTCGATCCTAACGAGCGGTACCTGCTGCTGAGCGCTCAGATGAGCGACGCCAAGGACGCGGCGGCCGAGTCTAAAGCCAAGAGAGACCGAGCTGGACAGAGGACGGCGCAGGACCGCATCCGGGTCGTCCAGCAAGAAATGAAGTCTTTGGAGAGTCATCCGATGTTTAACCCGGCTCTTAAAGTCAAAGACGCTCCTAAAGAGGACAGGAAGCCGGTGGCTGTCCCCGACGGGAAAGACGAGCTCGACTTCAAGCTCTttgaacaaacacagacacctCCAGCACAAAAAGCTGAGAAGCAGAAGAAAGAGCCCAAAGACATCCGTGACTTTGACTACACATCGAGGAGCTGGACGGGCAAGTCTCCCAAACAGTTTCTGATTGATTGGTGCAGGAAGAACCTCCCGAAGAGTCCTCCTCCCTCCTTCCAGAAAGCTGCAGTCGGCAGATACTGGAAATGCAAAGTTCGTATCCAGAGGCCTAATGACGTTCTGGAGGTTTGCCCCACTATCCTGACCGAAGACGGCATGCAGGCCCAGCACTTAGGAGCCACGCTGGCTCTGTACAACCTGGTCAAAGGACAGTCTGTGCATCAGCTCCTGCCGCCCACCTACCGTGACGTGTGGCTCGAGTGGAGAGACGGCGAGCAAAAAGAAGAGGAGCAAACCCGCTCCGCCATCAACAAACCCCGGGACCAGTTCATCGCCCGCCTGCTGAGTTGTCTCAAACAGCAGCAGAGCCTCCGCCCGCAGGCCGAGCCGCAGGACCAGCTCCCCGACGCCGAGCCCGAGGACTCCTGGGAGAGCCTGGACACGCAGGAGGAGCCGGAGCCCCAGCGCGGAGCAGGCCTGGAGGCGCAGGAGGCCGCCCGGAAGCTGCTGCTCGCGCTGAGGACCTCGGCTCTGGCCCGCAGGCTGCTGACTGACCGAGAGCGGCTGCCCGTCTTCCAGCTCCGCCCGCAGCTGATGGAGGCCCTGCGCCGCCACAGAGTTCTGGTGATCGCCGGAGAGACCGGCAGCGGGAAGAGCACGCAGATCCCTCAGTTCATCCTGGAGCAGCTCCTGGCCGGCGGAGAGCCCTGCAGCGTGCTGGTCACTCAGCCCAGGAGGATCTCAGCCGTGAGTCTGGCCTGCAGGGTGTCGCAGGAGCTGGGGAGCGAGGACGGCCCGGGAGCCAAGAGGTCGCTGTGTGGATATCAGATCCGTATGGAGAACCGCTCGGGTGAATCCACACGACTGCTGTACTGCACCACCGGAGTTCTGCTGCGCAAACTACAGCAGGACCGGCTCCTCGGCTCCTTCACGCACATCATCGTGGACGAGGTTCACGAGCGGAGCGTCCAGTCAGACTTCCTCCTCACCATACTAAAAGAAGTGGTCCAGAAGCGCTCGGATCTGCGCTTGGTCCTGATGAGCGCCACCGTCGACTGTCAGAAGTTCGCCAACTACTTCAACCGCTGTCCTGTGGTCACCGTTCCCGGCAGGACCTTCCCTGTGGAGGTGTTTCACCTGGAGGATATCGTGGAGGAGACGGGTTACGTTCTGGAGCAGGACTCCGAGTACAGCCAGAGGTttgtggaggaggaggaggaggtcaGCATCAGCGTCACACAGAAGGGAGGAAAGACTCTTCAGCACCAGGAGCTGATAGCGAGGGACTCGGGCTCAGGCTGGGATCTGGGTCCAGAGCTGGATCACTTCAGCAGCCGGACGAGACGTGTCCTGCAGTACATGAACCCCAATAAGATAAACATGGATCTGATATTAGACCTGCTGGAATACCTGGATAAATCTCCTCAGTTTCGTGATGTGGACGGTGCAGTTCTGATCTTCCTCCCAGGCCTGGCTCATATTCAACAGCTGTATGATCTACTGACCAGCGACAAGAGGTTCGGCTCCAGGGACAGATACAAGCTGATCGCCCTCCACTCCACGCTGTCCTCTCAGGACCAGTCTTCGGCCTTCACGGTGCCCCCTGCTGGAGTCAGGAAGATCGTTCTGTCCACAAACATCGCTGAGACGGGCGTCACTATTCCTGACGTGGTCTTTGTGATCGACACCGGAAAGACTAAAGAGAatcggTATCACGAGAGCAGTCAGATGAGTTCTCTGGTGGAGACGTTTGTGAGTAAAGCCAGCGCTCTGCAGAGGCAGGGGAGAGCGGGACGGGTTCGACCGGGCTTCTGCTTCCGGCTTTATCCCAAATTCAGGTTTGACAGCTTCAATGATTACTCCATTCCTGAGATTCTCAGAGTGCCTTTGGAGGAGCTTTGCCTTCATATTATGaagTGTGATTATGGCTCTCCAGAGGACTTCCTGTGTCGAGCTCTCGATGCTCCTCAGCAGCAGGCTGTGTGTAACGCTGTGGGTCTGCTGAGGAAGATCGGTGCGTGTCATCATGACAGCCACACCCTCACACCGCTCGGACATCACTTAGCTGCTCTTCCTGTCAACGTCAAGATCGGCAAAATGCTCATCTTTGGCGCTATCTTCGGCTGCCTGGAACCCATAGCCACCATCGCAGCGGCCATGTCTGAGAAGTCTCCGTTCGTCACCCCTATGAGCAGAAAGGAGGAGGCCGATCTGGCTAAATCTGCTCTAGCAGTCGCAAACTCTGATCACGTGACCATCTACCGCGCTTACCTCGGGTGGAGGAGCTCTCGGAGCGAGGGGACGCGTGCGGAGACGGCCTACTGCCGGAGACACTTCCTGAGCCGCACTGCCCTCATGACCCTGGAGgtgaactattcctttaaacagtgaACTGACCCCAAGCCTTACCCTCCTCAGGATGTGAAGCAGGAGCTGATGAGGATGGTGGAGCAGGCTGGGTTCGTCTCCTCGAGGCGCGGCGCTGAAGCCAAGGCCCTGCGCTC

Function

symbol description
dhx29 Predicted to enable several functions, including ATP binding activity; RNA helicase activity; and translation initiation factor activity. Predicted to be involved in positive regulation of translational initiation. Predicted to act upstream of or within translational initiation. Predicted to be located in cytoplasm. Orthologous to human DHX29 (DExH-box helicase 29).

NR:

description
ATP-dependent RNA helicase DHX29

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K18995 DHX29; ATP-dependent RNA helicase DHX29

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250438.1 True 4286 mRNA 0.56 27 521051 535959
XM_043250439.1 False 3743 mRNA 0.57 24 522029 535959

Neighbor

gene id symbol gene type direction distance location
LOC122352790 LOC107686441,LOC107744170 coding downstream 111 515783 ~ 520940 (-)
apbb1 apbb1,LOC107750985,LOC107573909,LOC107673752 coding downstream 88409 421501 ~ 432642 (-)
phax phax coding downstream 109726 407109 ~ 411325 (-)
lmnb1 lmnb1,LOC107673755,LOC107705849 coding downstream 114618 399164 ~ 406433 (-)
prrc1 prrc1,LOC107572184,LOC107565848,LOC107705848 coding downstream 162232 349414 ~ 358819 (-)
plpp1a plpp1,plpp1a,LOC106561845,LOC107686491 coding upstream 28100 564059 ~ 577223 (-)
csgalnact1a csgalnact1,csgalnact1a,LOC107713273,LOC107686490,LOC107685172,LOC107562546 coding upstream 43344 579303 ~ 611263 (-)
tctn1 LOC107686437 coding upstream 81071 617030 ~ 622149 (-)
golph3b LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107562594 coding upstream 149952 685911 ~ 690128 (-)
LOC122352658 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090 coding upstream 254313 790272 ~ 792344 (-)
G73570 NA non-coding downstream 14933 504440 ~ 506118 (-)
G73550 NA non-coding downstream 184658 335758 ~ 336393 (-)
G73518 NA non-coding downstream 191150 329277 ~ 329901 (-)
G73510 NA non-coding downstream 228790 291166 ~ 292261 (-)
G73515 NA non-coding downstream 235829 285009 ~ 285222 (-)
G73619 NA non-coding upstream 13236 549195 ~ 550288 (-)
G73623 NA non-coding upstream 42101 578060 ~ 579146 (-)
G73624 LOC103390470 non-coding upstream 91819 627778 ~ 635728 (-)
G73643 NA non-coding upstream 132376 668335 ~ 668724 (-)
G73684 NA non-coding upstream 206769 742728 ~ 743650 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other downstream 124431 359804 ~ 396620 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 429730 40690 ~ 91321 (-)
G73662 NA other upstream 157489 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 253464 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 349197 885156 ~ 888012 (-)
G74058 NA other upstream 909364 1445323 ~ 1448886 (-)
G74031 NA other upstream 930792 1466751 ~ 1473878 (-)

Expression


Co-expression Network