LOC122352790 (LOC107686441,LOC107744170)


Basic Information

Item Value
gene id LOC122352790
gene name LOC107686441,LOC107744170
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 515783 ~ 520940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250442.1
GTCTTGTAATTGTGACTTAAATGATGTGACTGTTCATGTCTTAAGTCTGACACGCAATTATTATAGATGAATAATAGACATTAAAAGTTATCTTGAGTAATGTGTCTGACAGTAGACTTTTGAGGAcgcaatttttttatattattcagagaaaagacacaaaaagcATTATGTTTGTGTAATAGTACTCTGATAGTCTTTATGGCTCTAAATGAATGTCTATCTGTTGTAAAAGCCTATAAAACTGAATAATCAATAAGTACATTAGTGTGCTTCCTGACAAACCCATCAACAACACGGTTCTTTCCAGCAGAGAAAGGTCTTCATGTGTACACTCCTTATAGAAtataatgtttgtgtgtatgttacACAAACATATCtcatacattatttacaatGGTACCATTATTATTAGCATAAGAGGATGTGGATGTAGTGTTGATATTTGTGTACGTGTTTATGTAGGTATTGATGGGTTATGtgtagatatatgtatatatgtgtaagtGTGAGTGTATACAAAACAATTTGGCCTCTTGAACTGTTATAAAAACACCCCTACATTCGTTATCTTTTAATTAAGAGATGGTGTAGGCCTGTGGTCTCAGTGTCTGGCCGACATCAGCCCTGTCTGCAATTAGTTTGCTAAATGTGTTCGCTGTCTGccggtttattattatttatcattattgatATTATCAGAACTTCTGCctctaataataaaatgctgtgGTCCTCAaatcattattttcataataattaaaaactgaaaaataaaaacccgTCCCGCTAATGGTGTCTAGCTGGCTGTGTATAGGCCGAGGGTTTATTATTAGAATTGAAGAAATATTcctaacatttttaacagtagctgatttaaaaaaatgtacaaactaAAAGGTTATTCTCTTCTGACGTTGTTTTACGAAATGTTTTAAGGACGCGTTGTATTTTCTCCAAACAAACACGGCTTCTGAAGAATTAATACCGCTCTGAGGGATTCAGGACAgggagtgggcggggcttcgTTTGGCGCTCAATTGAACGGGCGCTCTGAAGCGCGCGGACTCGAGGGTCACGTGACTCACCTGACGATAACGGTCAGACAACCGTCTCTCGGCGACGTGACGCCCTCCGCTGCTTTATCACGGCATCCCGCTTCAGTACAGAGGTTTAGGACTTTGCACGCGAATGatttaataacacaacaataaataattacatttctatcAGCAGGAGCATGCAGCGCTGTCAGCCAACCAATCACCTGCCGAGGATCTGCTGGACTTCACCACAGGTGAGCACTGATACACATTTAATGACTCTTGAAGAAAACGCAGGTCTGGATCTCTCTCTAGAGCTGAACAGACAGCTTCATGCCACACTCAGGAGAAGACAAGAGGAAATATCTGCCCTGAAGGAGACTAATGCCCAGCTGAGAGATCTGGCCAAACAGACTGAACATCACGCCACAATACTAGAAGCTCTGACAACATCGCCCCAGAGAGACTCTGTATCACACTGCACAGAGGACCTTTCTTCTGAACACTGCTGGATCTCTCTGCTGACACGAGAAGAGCCATCAGATCCATCATCCACAGCTTTGACTAACTCCACCACCGCTGACAAACAAAGCCCAGCAGCAGGGGTCAAGCGGCAGCTGTGGTCCAGCTGGAACGACCTTCTCTGTGAAGATGCTGAGGACGCCGGCTTGAACCGTCTGTCCGGTTACAAGCAGCCCAGACTTGTACAGGCAGACCAGGAGAATCTGAAGGCCCAGCTGGACCGGGTCGAACAGGCTCCTCGGCAACGAAGTGAAGATTCAGACCTGACCCAGAAGCAGAGCCTTGAGATGTCCTCCGGAGGCTTGATCGCACAAAGGGTGAACGTATTTGGGGCTTTCCGTGGACTTCAAGTGGTTACACAAACCCCATCCGTCACATCTGATCTCAACACGAGTGGAGATGATGGAAAAGTGTGCTTTAAGACCGCAGTCAGGGACCACAGTACAGTAAAGACCAAGGTTTTCCCACATGGAAAGGCTTTCACCGCTCACACGCCGAGTGGATCTTGTAGGTTCCTTTGGGTTCCTGAACAGCTTTATGATTCAAAGAGTTGAATGTGTATTATAAAATCAGCAGTGTTCCATGTAGATCAAAAGAACTGTTCTGTTTTGATTGATTGAGAAccttttaacatccatggaacatTCCAATGTGCAAAAGGTTCATCGCCGAAAGAGGTTTAAGAACTTTCCACTGCAAGGTTTCAAA

Function

NR:

description
PREDICTED: multicilin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250442.1 True 2273 mRNA 0.43 4 515783 520940

Neighbor

gene id symbol gene type direction distance location
apbb1 apbb1,LOC107750985,LOC107573909,LOC107673752 coding downstream 83141 421501 ~ 432642 (-)
phax phax coding downstream 104458 407109 ~ 411325 (-)
lmnb1 lmnb1,LOC107673755,LOC107705849 coding downstream 109350 399164 ~ 406433 (-)
prrc1 prrc1,LOC107572184,LOC107565848,LOC107705848 coding downstream 156964 349414 ~ 358819 (-)
LOC122352523 ctxn3,LOC107711251 coding downstream 167710 342789 ~ 348073 (-)
dhx29 dhx29,LOC107744100,LOC107686439,LOC107713347,LOC107562543 coding upstream 111 521051 ~ 535959 (-)
plpp1a plpp1,plpp1a,LOC106561845,LOC107686491 coding upstream 43119 564059 ~ 577223 (-)
csgalnact1a csgalnact1,csgalnact1a,LOC107713273,LOC107686490,LOC107685172,LOC107562546 coding upstream 58363 579303 ~ 611263 (-)
tctn1 LOC107686437 coding upstream 96090 617030 ~ 622149 (-)
golph3b LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107562594 coding upstream 164971 685911 ~ 690128 (-)
G73570 NA non-coding downstream 9665 504440 ~ 506118 (-)
G73550 NA non-coding downstream 179390 335758 ~ 336393 (-)
G73518 NA non-coding downstream 185882 329277 ~ 329901 (-)
G73510 NA non-coding downstream 223522 291166 ~ 292261 (-)
G73515 NA non-coding downstream 230561 285009 ~ 285222 (-)
G73613 NA non-coding upstream 3350 524290 ~ 524870 (-)
G73619 NA non-coding upstream 28255 549195 ~ 550288 (-)
G73623 NA non-coding upstream 57120 578060 ~ 579146 (-)
G73624 LOC103390470 non-coding upstream 106838 627778 ~ 635728 (-)
G73643 NA non-coding upstream 147395 668335 ~ 668724 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other downstream 119163 359804 ~ 396620 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 424462 40690 ~ 91321 (-)
G73662 NA other upstream 172508 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 268483 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 364216 885156 ~ 888012 (-)
G74058 NA other upstream 924383 1445323 ~ 1448886 (-)
G74031 NA other upstream 945811 1466751 ~ 1473878 (-)

Expression


Co-expression Network