mfsd13al (zgc:171489,mfsd13b,LOC107726812,LOC107573382)


Basic Information

Item Value
gene id mfsd13al
gene name zgc:171489,mfsd13b,LOC107726812,LOC107573382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14541530 ~ 14546151 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250548.1
TGGTGCAGTGCACTGTTTTTAAGTGGAATGAGCTGTCGTTATGATCTTTTTTAttgaaagcttttattttcttgcaaCACTCTCTGAGATGATCCGGAGAGTAAACTAATTAGCCGCGGTTGCATGAGCTTTATTATAGTGTTAAGTTTAAGTCCTTTGCGGACAGTCTTTAGCTTCCAGCCAGTCACATATTCGTCTTAGCATCATGAGGCACTTTGCTCATCCAGCTGCTCTGGCTTACTCCATGACAACGCTCGGTGctggcatgatgaacagcatttTTAGTTTCTATTATGTAAAGCTATTcttaaataagtacaaaatatCAGAGACAGCCTTCCATCAGTCGCAGGTGGTCTTTATGATCTGGAATGCTCTGAATGACCCCTTGTTTGGATATTTTCAAGACAACTCTCGTATGGAGTGCTGCTCGCGCCGGAGGCTCTCTATTTTATACGGCGCCCCACTGTACTGTCTGTCTTTTCTGCTGGCGTGGTTCCCGTGGAGGACGTACGAGGCGGACGACTGGATGAGCGGCGTCCACCTCATGGTGACCCTCTGCGCTTTCGACGGCATGCTCACATTCGTGCTGCTAGCCCAGTGCGCCCTCTTCGCAGAAATCTCCGGGCATCATCAGAACAGACTGAGGCTGATTAAATACAGCCAGGTGGCGTCTCTGATGGGCTCCTCCAGTGTGCTCTTCTGTGGTCTCGTCTCCGAAAACATGGAAAATTTTCCCGCCTTCCAGGGATTCAGCGTGGTGGTGGCCATACTGGCCTGCGTTTGCATGCTGTACACGGGCTTGAACAGCGAGAGTCGAGTTGACAGCAGAGCCTCTGAAGAAGACTCCCAGAGTCCTCAGAAGCCGCCGCTCTCGCTGTCGTCCGTGATGTCCATGACCTGGCAGATCATCACCAACCGAGACTTCCAGCTGTTCGTGATCATGAACTTCTTCCAGGTCTTCATGGTGGCCTTCTGCAATAACTTCACCATGATTTTTGCAGAGCACCTCATTCCTCCGGATGTCCTGCCATCGCTTGCCAAGAGCGTCATGTATGGAGCTGGATTCATCTGCCCTCAGATGTTGGTTTTGTGCAGCCAGAATCTGCTCCATAAGTTTGGCTACTACAGACTCATTCTGATCACCTTCTACGTGGAGGCCGGAGCTGCTGTGATCATGTTACTGCTGGGTCCAGGCAACTACTATTTCCTTGCATTGTTCCTCACTTCCAACATGGTCTTGGTTCAGGCGGCCTTCAGTCTCTTCAATTTGCCTCTAGCTGACATCATTGACTCTGACCTGCAGAAATACAAACGCAGCTCTCCTCTCTCGTCTATGGTTTTTGGGACCAACGCTCTTTTTACAAAGCCGGCACAGTCTTTAGCTCCTATGCTGGTCGTTTCCGTTCTAAACCAATATGGCTACGCAGAAATGAAGGACGCTGAGAAGGCTGCAGATCCAAGTGCCCTTCAGTCTCTGCACAGTACCATGTTTTACCTGGTGTGCGTGGTGCCGCTGTGTGTCTCAGTCCTGCAGGTGTTCGCCTGGAGGCCGTTCTCCATCAGGGAGAGCCACACAATAGACTCAAAGTACATCGATGGGTGAAGCCGGCTCATTTCACTTTGTTTGTATGCGTTCACTTTCAGCActtgatttatattttgatttttgttaaCTACAGACGTGAGAAAGGGAATTTTCTAGATGAATCTCTTGGTACTGTAAAGCAGGTTTGTTTCTCAGGTGGTAGTTGGTTCTCTATATGTACTGTATCTCATCACACAAATCAGATACATTATCTGAAATATAGGAAAATTATATGTATGCAGAGGAAATGTACAGTCAGCCAGTCCTATTTTTAAAGTTAGTTTGAGtgtaaattatttgattatgtGTGAGGAAAGAGAGCGTGGAGTGGAATTGTTGTggttgaccaatcagaatcaagtaatTCAAAGAGTTGTGTAATAAGCTTCTTTTCTGTGACACAATCTCAAAGCTTTGgagtcataatttttttttatcacttcaCCTTTGATGATTGATtcacacaaaacattaattttgaatatatttatttgtttattggttaTTGGGAAAGGTTTTGTGATTGTTGCTATTTTTCTACGTCAATAAACTTAACTATGTGGTCAAATAA

Function

symbol description
mfsd13b Orthologous to human MFSD13B (major facilitator superfamily domain containing 13B (pseudogene)).

NR:

description
transmembrane protein 180-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250548.1 True 2159 mRNA 0.45 6 14541530 14546151

Neighbor

gene id symbol gene type direction distance location
si:ch211-165g14.1 LOC107726816,LOC107573383,LOC107673826 coding downstream 692 14532487 ~ 14540838 (-)
dhrs7ca LOC107758776,LOC107654658,LOC107552132 coding downstream 52996 14485329 ~ 14488534 (-)
LOC122352756 ift46 coding downstream 256448 14280933 ~ 14285082 (-)
LOC122352754 NA coding downstream 260642 14278117 ~ 14280888 (-)
LOC122352755 NA coding downstream 264198 14273650 ~ 14277332 (-)
sdr42e2 sdr42e2,LOC107726803,LOC107654653,LOC107717482,LOC107552104,LOC106592406 coding upstream 8846 14554997 ~ 14568193 (-)
mosmoa c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding upstream 44868 14591019 ~ 14611223 (-)
LOC122352591 uqcrc2a,LOC107671252,LOC107717493,LOC107552131,LOC107674831 coding upstream 65650 14611801 ~ 14618610 (-)
si:ch211-256e16.3 si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741 coding upstream 74835 14620986 ~ 14629074 (-)
LOC122352450 NA coding upstream 565261 15111412 ~ 15115448 (-)
G77514 NA non-coding downstream 44076 14495498 ~ 14497454 (-)
LOC122353010 NA non-coding downstream 76210 14460368 ~ 14465320 (-)
G77480 LOC107575404,LOC107692500,LOC107728752 non-coding downstream 116043 14424513 ~ 14425487 (-)
G77476 NA non-coding downstream 172975 14366281 ~ 14368555 (-)
G77472 NA non-coding downstream 179796 14361354 ~ 14361734 (-)
G77669 NA non-coding upstream 555998 15102149 ~ 15103569 (-)
G77672 NA non-coding upstream 592456 15138607 ~ 15139007 (-)
G77674 NA non-coding upstream 610198 15156349 ~ 15156591 (-)
G77676 NA non-coding upstream 613314 15159465 ~ 15159847 (-)
G77692 NA non-coding upstream 727762 15273913 ~ 15276004 (-)
im:6904045 NA other downstream 56238 14484799 ~ 14485292 (-)
LOC122353009 LOC107562038,LOC107562041 other downstream 60081 14467186 ~ 14481449 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other downstream 198518 14340046 ~ 14343012 (-)
G77443 NA other downstream 277208 14234506 ~ 14264322 (-)
G77441 dlg1l,LOC107653521,LOC107705307,LOC107660320 other downstream 333524 14204416 ~ 14208006 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other upstream 22179 14568330 ~ 14589899 (-)
G77671 NA other upstream 560986 15107137 ~ 15107752 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other upstream 683818 15229969 ~ 15289672 (-)
G77702 NA other upstream 811534 15357685 ~ 15358232 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 1346493 15892644 ~ 15897232 (-)

Expression


Co-expression Network