LOC122352897 (LOC107569402,LOC107688131,LOC107686449,LOC107744108,LOC107713359)


Basic Information

Item Value
gene id LOC122352897
gene name LOC107569402,LOC107688131,LOC107686449,LOC107744108,LOC107713359
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 8531873 ~ 8539969 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250649.1
GGCCGATGGTATATACGCTTTAGCTTTAGCAGTGCGGGAATACGGTGCGAGGATGAAGCGAACATGATCAGTGCCGATGGCCCCTCCAAGTGTGACGAGACCCGGGACAGAAAGAGGCAATCGCCAGAAATGCTGCACCTTATGTTCGCCGTGTCCGTATGGTTGGTGACGGGCACCACCATATCCAGCCTCAACAAATGGATATTCGCTGTGTACAATTTCAGATACCCCCTGCTTTTGTCAGCCCTCCACATGCTGACGGCGATCGTGGTGGACTACGGACTAATCAAGTGCAGGGTGATCTGGTATAAAGGCGTCGAAGAGCAGGGTTTAACCAGCAGCGCCAAATGTAAAGTATTCCTGCTGAGCTTAACGTTCTGTGCCAGTATCGCGTTTGGCAATGTGGCCAATTATGTAATGCAGCTTTCGTTCGCGCAGATGATCTACACCACAACGCCACTGTTCACGCTGGCCATTTCCACGCTGATTCTCGGGAAGCAGCACCACATCTTAAAGTACACCGCGATGATGCCCATCTGCCTCGGGGCGTCGTTCAGCATAATGGGCGAGGTCCAGTTCGACCAGACCGGCTGCCTGTTTGTGTTTGTCGCCACTATGTTAAGAGGCGTAAAAAGCATTCAGCAAAGCATCTTGCTCCAGGAGGAGAAAATCAACTCTGTCTTCCTACTGTATCTGATGTCCATCCCCAGTTTCTGCATCTTGGCCATAGCTGCCCTGGTTCTGGAGAACTGGGCTGCACTGCAATCCCCTTTCCAATATGACCACCACCTCTGGGGTTTCATCTTGCTCAGCTGTCTGGGCTCAGTGCTTTACAACCTGGCCAGCTGCTGTGTTATCACTCTGACCTCTGCTGTCACACTGCACATCCTGGGCAACCTGAATGTGGTGGGGAACCTGCTACTCGTGCAGCTGCTGTTTGGGCATGAGCTGACAGCTCTTAGCTGTGCTGGAGCTGCACTCACCCTCTCAGGCATGATCATCTACCAGAACTCAGAGATCATTGTAGCTTACATCGATGCATGGAGAGCCAAGACACCAACCAGTGGCAGTGGAGAGGATGTGGTTTGTTTTCAGGAGAATGATTTAAGCATATCAAAGACTCCAGAACTTTGTTCAGAAGAAAAATCATCTGTAGTAGCAGGTGAAGAATTTAACGAGAGGACAGATATTCAGGTTCATGAGAAAATAGACTGAAGAGACTTAAAGGCTGTGTTCCAAAGCCTAGTGAGCTGCAGtgctgctattttatttatagccTTACTTTTTTCTTGCATGGAGTAAAAGGAAAGAATCATGGCTCTCTTTTCCACAACCACTTTTATTAGATGGTAAAGAGAAGCTTGGGCCAGAGTTATTGTAGTTAAGTAAAATTCATCTAAAGGCCGGGACACACCAAGCCGACAGTCGACCATTGGCTCTTGTCGCGCTGACGAAGAGCAACGGTCGGGCTAGTCTGTTTGGTGTTTTCCACTTGTTGACTTTGGTCAGGCTCACTTTGATCCAATTCAGCATGTTGAATCGGCGTCGCAACCATCTGCGAAAGTAAGAACTGTGGATGCTTAGATCCGCAAATGAGATCCGCAGtgaattaaagtgaaaataatataaagtaaatcaatTGGCGACACAAATAGAAGGCTGTTCTAATGTTACGTGGTCTTAAGCATTCCAGTATGTGAATGTTATCATAACAACATGATCcgcttaaaataaagaaatatatcaGCGTTACCTATGATGGTATACAAGTGCtgctttttgaacatttcataTATCTGCATAACTCTTGTATATCTTTGTTCAGGTCTCTCAGTTTGAATTAGAAAAGATATGAGAGATCCTGAAAGCGAGAATCTTAACTTCTCAAGTTTTATGCAGCAAAAGATTTCTCATATCCACATATCATTTGATAGAAGGATGACACTTTCCCATTTAATGATAATAGCTCATCTAGCTAACCACTTCACTTTCTTTGTAAAATGCTGTTCTATTATaacaagcaaaaacacaaaataatcttcaaaattttaaataaagatagaaaaataaaacgtttcccAACAGAAAATGACccttgtaattaattaaaagataaacatgtggcgttagcatgttgctaagctaacactGATATTCTACTAAGCAAAATACAAAGCACACCAGTCTAAAATAgtctatttttaattcaattgaacTATTTTATTGA

Function

NR:

description
PREDICTED: solute carrier family 35 member E4-like isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15286 SLC35E4; solute carrier family 35, member E4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250649.1 True 2227 mRNA 0.44 4 8531873 8539969

Neighbor

gene id symbol gene type direction distance location
LOC122352883 inpp5j,LOC107686450,LOC107562581,LOC107688649,LOC107744151,LOC107569389 coding downstream 13882 8498472 ~ 8517991 (-)
mat2aa mat2aa,LOC107688110,LOC107686452,LOC107569395,LOC107744110,LOC107713361,LOC106580346 coding downstream 35640 8489265 ~ 8496233 (-)
mpx LOC107686454,LOC107744111,LOC107562576,LOC107688477 coding downstream 63766 8462246 ~ 8468107 (-)
loxa lox,loxa,LOC107562574,LOC107686455,LOC107569406,LOC107744154 coding downstream 78528 8437322 ~ 8453345 (-)
snx24 snx24,LOC107686500,LOC107688100,LOC107713362 coding downstream 99387 8427568 ~ 8432486 (-)
LOC122352888 pcyox1,LOC107562568,LOC107686458,LOC107713365,LOC107569400,LOC107688072,LOC106564891 coding upstream 34293 8574262 ~ 8579753 (-)
inpp5kb LOC107556871,LOC107720665,LOC107718714,LOC107592158,LOC107701109 coding upstream 695941 9235910 ~ 9244662 (-)
pitpnab pitpnab,LOC107556875,LOC107684996,LOC107720580,LOC107701111,LOC107592159,LOC108410689,LOC103045464,LOC108237022 coding upstream 705981 9245950 ~ 9265990 (-)
slc43a2b slc43a2b,LOC107684998,LOC107556870,LOC107720664,LOC107701113 coding upstream 726845 9266814 ~ 9277561 (-)
hephl1b LOC107720546,LOC107685013,LOC107556850 coding upstream 737733 9277702 ~ 9288615 (-)
G75871 NA non-coding downstream 271606 8230688 ~ 8260267 (-)
G75868 NA non-coding downstream 310008 8214662 ~ 8221865 (-)
G75767 NA non-coding downstream 366165 8165448 ~ 8165708 (-)
G75749 NA non-coding downstream 432067 8097306 ~ 8099806 (-)
G75667 NA non-coding downstream 768020 7761525 ~ 7763853 (-)
LOC122352914 NA non-coding upstream 347035 8887004 ~ 8887358 (-)
G75970 NA non-coding upstream 589917 9129886 ~ 9130320 (-)
LOC122352752 NA non-coding upstream 767999 9307968 ~ 9310228 (-)
G76042 NA non-coding upstream 782630 9322599 ~ 9325478 (-)
G76112 NA non-coding upstream 1030462 9570431 ~ 9572283 (-)
smtna smtna,LOC107686451,LOC107569392,LOC107688657,LOC107713360,LOC107744109,LOC107579337 other downstream 4426 8519666 ~ 8527447 (-)
unc13bb unc13bb,unc13b,LOC107686461,LOC107713368,LOC107688005 other downstream 135474 8318889 ~ 8396399 (-)
G75863 NA other downstream 245955 8173349 ~ 8285918 (-)
rnasekb rnasek,LOC107554319,LOC107720683,LOC107676000,LOC107586166 other downstream 646391 7883342 ~ 7885482 (-)
trnal-uag_2 NA other downstream 669507 7862285 ~ 7862366 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other upstream 3128 8543097 ~ 8556088 (-)
G76068 NA other upstream 887993 9427962 ~ 9429800 (-)
cd209 NA other upstream 949361 9489330 ~ 9510430 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other upstream 1032403 9572372 ~ 9625405 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other upstream 1727385 10267354 ~ 10283665 (-)

Expression


Co-expression Network