stoml2 (stoml2,LOC107686459,LOC107569390,LOC107688641)


Basic Information

Item Value
gene id stoml2
gene name stoml2,LOC107686459,LOC107569390,LOC107688641
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 8398186 ~ 8401596 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250650.1
GTTACTGATACACGCCTCGTGATGTTGTAATGTGATTTCCGCAACTGCAAGGGGGTCACGTTTGTAGTGCAAACTCGAGAAGAATCCATTCATTTGTCGCAGTGATCTTTCAGCGTCTGTATTAATAAAGGCTGAACATGATCAGGACGGCGGTGTGTCGGGCAGGGAGTGGTCTTTTAAAGCATTCACGGCAAACCCTGCCTGCTTTATGGGGGACCCGTGCTCAACATCGATGGGCTTCCAGCCTCCCTTTGAACACCGTGGTTCTGTTCGTGCCCCAGCAGGAAGCTTGGGTGGTGGAAAGAATGGGCCGTTTCCACCGAATCCTGGAACCAGGTCTAAACTTCCTGATTCCCATCTTGGACCGAGTTAAATACGTTCAAAGCCTCAAAGAGATAGTGATCGATGTGCCCGAGCAGTCAGCCGTTTCCCTCGACAATGTGACGTTGCAGATAGATGGAGTTTTATATCTCAGGATACTCGACCCATTTAAGGCCAGTTATGGAGTGGAGGACCCAGAATATGCTGTTACCCAGCTGGCACAGACCACCATGAGATCAGAGCTGGGAAAACTGACTCTGGACAAAGTGTTTAGGGAAAGAGAGTCCCTGAATTCCAATATCGTTCACTCTATAAACCAGGCATCAGATGAATGGGGGATTCGATGTCTTCGATACGAGATCAAAGACATTCACGTTCCTCCACGGGTAAAAGAGTCTATGCAAATGCAGGTGGAGGCCGAGCGGAAGAAGAGAGCCACTGTTCTGGAGTCAGAGGGGACGAGGGAGGCGGCCATCAATGTGGCTGAGGGTCGCAAACAGGCTCAGATTCTGGCGTCTGAGGGGCAGAAAGCCGAACAGATAAATAAAGCTgctgGTGAAGCGAATGCTGTTTTGGCTAAAGCTGAGGCAAAGGCCAAAGCTATCCAGCTGCTGTCCGAGGCGCTCACCGAGCAGAATGGAAACGCTGCAGCATCTTTAACGGTAGCTGAACAATACGTCTCTGCTTTCTCCAACCTGGCCAAGGAATCTAACACCATCTTATTGCCTTCCAACACAGGAGACATCAGCAGCATGGTCTCTCAGGCCATGGCAATATACGGGAGTTTATCAAAGACAAAGAGCGCAGCAGACAGTGGGACCGCTGAGACCAACGAGCCAGTTTGGAAAGAAGACGCTATGTCTGAAACAGAAACTGGACATAAATAATGGTTAAAGACGGAAAGCGTTGACACTGCAAAGATTCTGGTTGTAGAAGACTGATGCGAGAGAACCGAAATGATAAAATCGCAGAAGATTTTATTgcgtgtatgtttttgtttattataataaatatggaatatttagtttttcctgATAA

Function

symbol description
stoml2 Predicted to be located in membrane. Orthologous to human STOML2 (stomatin like 2).

NR:

description
stomatin-like protein 2, mitochondrial isoform X1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250650.1 True 1359 mRNA 0.48 10 8398186 8401596

Neighbor

gene id symbol gene type direction distance location
fam166b LOC107744158,LOC107562540,LOC107686494,LOC107713372,LOC107555534,LOC107688046 coding upstream 103351 8292462 ~ 8294835 (+)
rnf208 si:dkey-106l3.6,LOC107744121,LOC107686464,LOC107688056,LOC107713373,LOC107562563,LOC107555535 coding upstream 113876 8272091 ~ 8284310 (+)
LOC122352886 slc5a1,sglt1,LOC107744177,LOC107713298,LOC107688629,LOC106563210 coding upstream 127945 8259988 ~ 8270241 (+)
LOC122352887 slc5a1,LOC107688629,LOC107713298,LOC107744177,LOC106563210,LOC105913283 coding upstream 156730 8228308 ~ 8241456 (+)
LOC122352913 unc13bb,LOC107686461,LOC107713368 coding upstream 212536 8159643 ~ 8185650 (+)
fam136a fam136a,LOC107744116,LOC107713366,LOC107562571,LOC107569401,LOC107686460,LOC107688083 coding downstream 8271 8409867 ~ 8411603 (+)
ggcx ggcx,LOC107744113,LOC107686456,LOC107569403,LOC107562573,LOC107713363,LOC107688460 coding downstream 18740 8420336 ~ 8426930 (+)
sftpba LOC107744174,LOC107688118,LOC107562578,LOC107713296,LOC107578508 coding downstream 73997 8475593 ~ 8481988 (+)
LOC122352417 NA coding downstream 669244 9070840 ~ 9085659 (+)
paxbp1 paxbp1,zgc:158234,LOC107684999,LOC107701114,LOC107718769,LOC107592156 coding downstream 889255 9290851 ~ 9302634 (+)
G75799 NA non-coding upstream 84064 8313561 ~ 8314122 (+)
G75774 NA non-coding upstream 112321 8285155 ~ 8285865 (+)
G75766 NA non-coding upstream 232482 8165448 ~ 8165704 (+)
G75629 NA non-coding upstream 328275 8036134 ~ 8069911 (+)
G75607 NA non-coding upstream 495455 7901223 ~ 7902731 (+)
G75813 NA non-coding downstream 63148 8464744 ~ 8467277 (+)
LOC122352915 NA non-coding downstream 301918 8703514 ~ 8704860 (+)
G75934 LOC107556871,LOC107701109,LOC107720665 non-coding downstream 307158 8708754 ~ 8712198 (+)
G75974 NA non-coding downstream 844402 9245998 ~ 9253481 (+)
G75984 NA non-coding downstream 865219 9266815 ~ 9273289 (+)
G75750 NA other upstream 295262 8101476 ~ 8102924 (+)
arrb2a arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026 other upstream 518086 7872539 ~ 7880100 (+)
trnat-agu_2 NA other upstream 536153 7861960 ~ 7862033 (+)
trnas-gcu_13 NA other upstream 536512 7861593 ~ 7861674 (+)
LOC122353465 NA other upstream 536807 7861246 ~ 7861379 (+)
LOC122352912 fam136a,LOC107569401,LOC107562571,LOC107713366,LOC107744116,LOC107686460,LOC107688083 other downstream 178413 8580009 ~ 8581128 (+)
G75935 LOC107556871,LOC107718714,LOC107720665,LOC107592158 other downstream 311607 8713203 ~ 8716277 (+)
G75937 NA other downstream 332183 8733779 ~ 8734996 (+)
gbe1a gbe1,LOC107685012,LOC107708609,LOC106581537,LOC108410718,LOC105900410 other downstream 675270 9076866 ~ 9207335 (+)
LOC122353220 slc46a3,LOC107701100,LOC107555149,LOC107718789 other downstream 947576 9349172 ~ 9396047 (+)

Expression


Co-expression Network