LOC122352928 (LOC107675999,LOC107720693,LOC107677996,LOC107552059)


Basic Information

Item Value
gene id LOC122352928
gene name LOC107675999,LOC107720693,LOC107677996,LOC107552059
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7531145 ~ 7533022 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250685.1
aattatctcattaactttaaATCTGCTTCAGTGTTAATTTAACATTCAGGATTTTGTGGAGCGGTATGTGAAGATTgtgattagagatgtagaaacAGCAGACACGGTGAAGGAGTCAGTACAGAGgtgtAAGCATGTCGAATCAAATGGTAGTCATGCAGCCCCAGCCTGTTATGGTCTTCAGAGATTCTGATCAGTGGGGGTCTGGTATCTGTGACTGTTGCGACGATGTGCCTGAATGCTGCTTTGGTTCTTGGTGTTTCCTGTGTTTCACGTGCATCAAAGCAAAGAAATATGGTGAGTGTTTATGTCTCCCCCTGCTGGACCTCTGTGGATTCATCCCACCCATAACCATGTCCATAAGGGTCTCGATGCGCCAGCGTTACGGCATTAAGGGAGACCTGTGTAATGACTGCTTGGTGGCCACCTTCTGCAGACTCTGTGTTTGGTGTCAGATGTCACGGGAGATGAGAGCAAGAGATCTACAGATCACTCTTGTTGGTGCCAGGAATCTGTAATGTGTTTTGAAGCGGCTGTGCTGTTGTGTGAATAAGAATCCTCACACTGAAAGgcagttatatatttattgacactaactgaataatttttatattgcattaagggcgttcattttttttcttctgtaaattCCTGATGTATTTTGTGATCAGAAACAAggttgattaaaaacattttctactaca

Function

NR:

description
PREDICTED: cornifelin homolog B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250685.1 True 704 mRNA 0.42 4 7531145 7533022

Neighbor

gene id symbol gene type direction distance location
LOC122352925 LOC107551999,LOC107677957 coding downstream 8011 7519599 ~ 7523134 (-)
ponzr10 LOC107552045,LOC107742363 coding downstream 12024 7514651 ~ 7519121 (-)
ugt5g2 ugt5g2,LOC107678052,LOC107552046,LOC107742408 coding downstream 17084 7511724 ~ 7514061 (-)
tlx3b tlx3b,LOC107742409,LOC107586149,LOC107676002,LOC105024610,LOC107552047 coding downstream 34807 7490561 ~ 7496338 (-)
parp14rs4 LOC107720697,LOC107552062,LOC107678011,LOC107552063,LOC107678013,LOC107677959,LOC107742382 coding downstream 89321 7427836 ~ 7441824 (-)
cldn7b cldn7b,LOC107586151,LOC107676017,LOC107678043,LOC107720692,LOC107552057 coding upstream 6258 7539280 ~ 7544064 (-)
fgf11b fgf11b,LOC107677987,LOC107586150,LOC107720691,LOC107676016,LOC103026543,LOC108443340 coding upstream 16971 7549993 ~ 7588859 (-)
epob epob,LOC107676014,LOC107586154,LOC107742357 coding upstream 148873 7681895 ~ 7686300 (-)
trnal-uag_1 NA coding upstream 151620 7684642 ~ 7684723 (-)
LOC122353013 LOC107677955,LOC107554294,LOC100002544,LOC106563379 coding upstream 155119 7688141 ~ 7689495 (-)
G75549 NA non-coding downstream 42578 7487473 ~ 7488567 (-)
G75548 NA non-coding downstream 44035 7486212 ~ 7487110 (-)
G75537 NA non-coding downstream 79094 7450667 ~ 7452051 (-)
G75533 NA non-coding downstream 159227 7370932 ~ 7371918 (-)
G75532 LOC107742369,LOC107687312,LOC107586143,LOC107720700,LOC107552065,LOC107682917,LOC107677962 non-coding downstream 161076 7366811 ~ 7370069 (-)
G75633 NA non-coding upstream 76118 7609140 ~ 7616184 (-)
G75654 NA non-coding upstream 154672 7687694 ~ 7687973 (-)
G75666 NA non-coding upstream 227811 7760833 ~ 7761098 (-)
G75667 NA non-coding upstream 228503 7761525 ~ 7763853 (-)
G75749 NA non-coding upstream 564284 8097306 ~ 8099806 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other downstream 2587 7524194 ~ 7528558 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other downstream 350324 7177324 ~ 7180821 (-)
sprn2 LOC107578968,LOC107720715 other downstream 899957 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 990172 6538122 ~ 6540973 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other downstream 2502632 5019307 ~ 5028513 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 317999 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 327200 7860222 ~ 7860303 (-)
trnal-uag_2 NA other upstream 329263 7862285 ~ 7862366 (-)
rnasekb rnasek,LOC107554319,LOC107720683,LOC107676000,LOC107586166 other upstream 350320 7883342 ~ 7885482 (-)
cadm2a cadm2a,LOC107720667,LOC107708610,LOC107675986,LOC107554325 other upstream 469339 8002361 ~ 9032489 (-)

Expression


Co-expression Network