gpat4 (gpat4,LOC107746208,LOC107758670,LOC107689060,LOC107558124,LOC107658586,LOC107583403)


Basic Information

Item Value
gene id gpat4
gene name gpat4,LOC107746208,LOC107758670,LOC107689060,LOC107558124,LOC107658586,LOC107583403
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16021077 ~ 16029140 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250688.1
GGAAGTTGCTGCAGCCGTGCCTCGCGCCGCTGCTGATGCGCTTAAACTTGTtgcataacaacaaaaacaacagcagcgtCTCACGATGCTCAAATGTCAAATTAGTGTTTCATTGAGAAGGCAAATCAGCATTTGAACGCTATCTTCCGGGCACAGgtatgGCCGTGGACTGATATGAGACCGCGTGAAACACATTATTCTTCCAAAGAGACTGTAAAAGCAGGAACGATTGGATGTTAAGGTTTTTTTAACCTTTACCTGTTCCGCTGATATGTCTAGTGCGTTAATTTAATGGATATTTGTCCGTTATTCCAGGCATAAATGCTAAGTTTTCCCTCTATGCCCATGAAGGCCGTGTTTCAGCGTAGGCTTCAGAAATTGAGGCACTTTAGAGGAGTCCAGCAGTCTGTGTTTAGGTAACTTTGTCACGTTTAAGTAGTCCAGTGTCCACGTTTTGGTCGAGATGGAGTCCTACCTCTTCCCCTTCGACAGCCTGATCTGTATGCTCTTGGGCATCTCCTTCACGGTGTGGTTCACCCTTCTTCTGGTGTTCATCATCGTACCTGCTATCTTCGGTGTGTCCTTCGGGATCCGCAGACTGTATATGAAGTCCCTCATCAAGCTATTTGAGTGGGCGACCTTAAGAATGGAGCGGGGAGCCAAAGAGAAGAATCAGCATCTCTACAAACCCTACAGCAATGGGATTATTGCTAAAGAACCAGTGTCCCTCGAACAGGAGATCCAGGAAATGAGGCGTGGTGGTGCAGAGCCTGAGTTTGACATGTCTGACATCTTCTATTTCTGCCGGCGAGGTGTGGAGAGCATCGTCGATGACGAGGTGACCAAACGCTTCACCGCGGAGGAGCTGGAGTCCTGGAACCTGCTAACTCGAAGCAACTATAACTTCCACCACATCAGCACCAGGCTCACAGCACTCTGGGGGGTGGGAGTACTCATTCGATATGGGTTTCTACTACCACTCAGGGTCACGCTTGCTTTCACCGGTGTCGGTCTTCTAGTGGTTCTGACGTCAATCGTTGGCCTGTTTCCAAATGGAAGAATAAAGAATTATCTCAGCGACAAGGTTCATCTGATGTGTTACCGTATCTGTGTGAGAGCCCTCACAGCCATCATCACCTACCATGACAGtgaGAATAAACCCAAAAACGGAGGAATCTGCGTGGCCAATCACACCTCCCCTATCGACGTCATCATTCTGGCCAGTGACGGATGCTATGCTATGGTGGGTCAGGTCCATGGTGGTCTGATGGGGGTCATTCAGAGGGCGATGGTGAAGGCCTGTCCTCACATCTGGTTTGAGAGGTCTGAAGTGAAGGACCGAAACCTAGTGGCCAAACGattaagtGACCATGTTGCAGACACAAGCAAACTGCCAATCCTCATATTTCCAGAGGGTACTTGTATTAACAACACTTCAGTCATGATGTTCAAGAAGGGAAGCTTTGAGATCGGCTGCACTGTTTACCCTGTGGCCATAAAGTATGACCCTCGTTTTGGTGATGCGTTCTGGAACAGCAGCAAGTTTGGGATGGTGAACTACCTGCTGCACATGATGAGCAGTTGGGCCATTGTGTGTAGCGTCTGGTACCTTCCACCAATGAGCCGCATGGAAGAGGAGGACGCTGTGCAGTTTGCAAACAGAGTCAAAGCAGCCATTGCTAGAAAGGGAGGACTGGCAGACTTGTTATGGGACGGTGGTTTAAAACGAGGGAAAGTCAAAGAAGTTTTTAAGGAGGAGCAGCAGAAACTTTACAGCAAGGTTTTAGTGGGCAGCAGCGAAGACCGCAGTCGCTCTTGAGGGGATGCAGCGGTCTACTTCACTTTACACATGCTGCTTGGTGCTGACGGTGAGAGCCTGGTCCCTCAGCTAATGCAGTGCGGCCCTAGACTGGCTCCTTCCTGAACCCGCTCAGACTGAACCGTAGAACTGAAATGAAGTCATTGCGAGTCGGTGGGAAAACTGTGTTGCCAGATCCTCGACTCACTGCTGCGCCTCAGGAGCTTTTGCATCGTTGCACGAAAGTGTCTGTGGCATTCAATTCCTGGGCTGACTATGATTTCAGTTTGGAGTGAGAGTTACACATGGCATATttgagtgatttttattttttagtttttggttcGTCCTTCACGGTCTGTTACACTTCTGAATATTTGTGCTGTTACTATAATGCATGATGTCCCAGGAAAAGAATGAATGGAAGAGTTTGAAGTGATTTATTTAAgcttgtatataaaaaaaaaaaatcggagaAAAAGTTGAAAGGATTGTGTGCGTAGAACTTTAGTGTTTGTAGAACCACAAAGAACAATATCTGTCACGTGTTTAGCTGCTCGGCGTTCATCTCCTCATGGCAGCGTCTCTAGTGTGccgtttgttcttttttaataaaacgttttttttaaaa

Function

symbol description
gpat4 Predicted to enable acyltransferase activity. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human GPAT4 (glycerol-3-phosphate acyltransferase 4).

NR:

description
PREDICTED: glycerol-3-phosphate acyltransferase 4-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13506 GPAT3_4, AGPAT9, AGPAT6; glycerol-3-phosphate O-acyltransferase 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250688.1 True 2429 mRNA 0.47 13 16021077 16029140

Neighbor

gene id symbol gene type direction distance location
rab11fip1b LOC107758672,LOC107689050,LOC107746209,LOC107583401 coding downstream 11549 15994912 ~ 16009528 (-)
brf2 LOC107746211,LOC107658585,LOC107758611,LOC107558130,LOC107689884,LOC107682650 coding downstream 27105 15989593 ~ 15993972 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding downstream 62632 15931955 ~ 15958445 (-)
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding downstream 130587 15872490 ~ 15890490 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding downstream 156547 15862177 ~ 15864530 (-)
ggt1b ggt1b,LOC107758666,LOC107689091,LOC107602052,LOC107658554 coding upstream 52830 16081970 ~ 16095356 (-)
LOC122352490 kdm2b,LOC107602054,LOC107689109,LOC107746202,LOC107558119,LOC107658591 coding upstream 117296 16146436 ~ 16169814 (-)
rhof rhof,LOC107689190,LOC107758662,LOC107577248,LOC107658595,LOC107558117,LOC107746201 coding upstream 154714 16183854 ~ 16187960 (-)
car15 car15,LOC107602060,LOC107758609,LOC107689182,LOC107558080 coding upstream 180608 16209748 ~ 16213685 (-)
dgcr2 dgcr2,LOC107689205,LOC107602057,LOC107746195,LOC107558114,LOC107658593,LOC107758577 coding upstream 187886 16217026 ~ 16227175 (-)
G77820 NA non-coding downstream 33590 15935553 ~ 15987487 (-)
G77821 NA non-coding downstream 89426 15931346 ~ 15931651 (-)
G77831 NA non-coding downstream 92760 15928092 ~ 15928317 (-)
G77830 NA non-coding downstream 93579 15927186 ~ 15927498 (-)
G77827 NA non-coding downstream 99717 15920921 ~ 15921360 (-)
LOC122353141 NA non-coding upstream 69855 16098995 ~ 16101344 (-)
trnag-gcc_65 NA non-coding upstream 89646 16118786 ~ 16118856 (-)
trnag-gcc_66 NA non-coding upstream 89812 16118952 ~ 16119022 (-)
G77936 NA non-coding upstream 149460 16178600 ~ 16179895 (-)
LOC122352611 NA non-coding upstream 160394 16189534 ~ 16193540 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 123845 15892644 ~ 15897232 (-)
G77702 NA other downstream 662845 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 731405 15229969 ~ 15289672 (-)
G77671 NA other downstream 913325 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1431178 14568330 ~ 14589899 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 1387 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 143338 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 386768 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 403387 16432527 ~ 16437594 (-)

Expression


Co-expression Network