ppp2r2ab (ppp2r2ab,LOC107744137,LOC107720666,LOC107678035,LOC107560523,LOC107687801)


Basic Information

Item Value
gene id ppp2r2ab
gene name ppp2r2ab,LOC107744137,LOC107720666,LOC107678035,LOC107560523,LOC107687801
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5892603 ~ 5906876 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250743.1
AATGTTGAGAGAAGTGTAGGAGGATAGAGCTGTGAGGAGGGTGGGTTGCAGGAAGAAAGCCTTAGGACCTTAAGATTTAGGCCTGAACGAAAGGACTACCGAAAAGAGCTGCTTTCTGAGGTCCGTCTTCATCCGTTCCCAGACGAACTgcttgcaataaaataaatccgGCAAAGTTATCTGGACAGTTCTGTTACCAAAAATTAGCAGCAGCAAGCGAAGaaaatcacGTCCAGgcgcttttattttgaaaaactgcATTTCCGGCGACTCTCTTGGAAATCTTGCTCTGGTCGCTGCCTTCACACTGCTTATCAAGACTAGGGTCCGACATCGCCACTCTCGCCATGGCAGGAGCCGGAGGCGGGGGAAACGATGTGCAGTGGTGCTTTTCACAAGTGAAAGGTGCGATCGATGACGACGTTGCTGAAGCCGACATCATCTCTACTGTGGAGTTCAACCACTCAGGGGAGCTGCTAGCCACAGGGGATAAAGGCGGTCGAGTTGTCATCTTCCAGCAGGAGACTGAGaacaagaGTCAGCCACAGTGCCGTAGTGAATACAATGTTTACAGCACATTTCAGAGCCACGAGCCTGAGTTCGACTACCTGAAGAGCTTGGAAATCGAGGAAAAGATTAACAAGATCCGCTGGCTACCGCAAAAGAATGCTGCACAATTTTTGTTGTCCACAAATGATAAAACTATAAAGTTGTGGAAGATCAGTGAACGTGACAAGAGACCAGAGGGATACAATCTTAAAGAAGAGGATGGGCGCTACAGAGACGCCGCTACCATCACAACTCTACGGGTGCCAGTATTCAGGCCTATGGATCTCATGGTGGAGGCCAGTCCGCGGCGGGTCTTTGCCAACGCCCACACCTACCACATCAACTCCATCTCGGTCAACAGCGACAACGAGACCTATCTGTCAGCAGACGACCTTCGCATCAACCTGTGGCACTTAGAGATCACGGACCGCAGCTTCAACATCGTGGACATAAAACCGGCCAACATGGAGGAGCTGACGGAGGTGATCACAGCCGCAGAGTTCCACCCTCACCAATGTAACACGTTTGTCTACAGCAGCAGCAAAGGCACCATCCGCCTGTGCGACATGCGCGCGACAGCACTTTGCGACAAGCACTCTAAACTGTTCGAAGAACCCGAGGACCCCAGCAACCGCTCTTTCTTTTCGGAAATCATCTCTTCGATCTCAGACGTGAAGTTCAGTCACAACGGCCGCTACATGATGACCCGAGACTACCTGTCCGTCAAAATCTGGGATCTCAACATGGAGAATCGACCCGTTGAGACATACCAGGTTCACGAGTACCTCAGGAGCAAGTTGTGCTCTCTCTATGAGAACGACTGCATCTTTGATAAATTCGAATGCTGCTGGAACGGAAATGACAGCGTGGTGATGACTGGATCCTACAACAACTTCTTTCGAATGCTGGACCGCAGCCAGCGGCGGGACGTCACCCTGGAGGCTTCGCGCGAGAGCTGCAAGCCCCGGCAGGTCCTGAAGCCGCGCAGGGTCTGCGCGGGCGGCAAGCGAAAGAAGGACGAGATCAGCGTGGACAGCCTGGACTTCAACAAGAAGATCCTACACACCGCCTGGCACCCGCAGGAAAATATCATCGCCGTGGCAACCACCAACAACCTCTACATCTTCCAGGAAAAAGCGAACTAATACTGTCGTCATGGGGAAAGAAAACCTCcgaacctctctctctctctatgtgaaaatgagaaaaaaataaaatgaaaaaaaaaaaaatgaactagCAAAAATCATTTCTGTGACAGCCACCGTCATCACGTAACCAACCTTGGCCTGCTCCAGGACAGAATGAACTAGTCGAGCCAACTAGCGGCTGCCAATACTGAGTAAACTGGTTCAAACTGGTCTGGAGAAGAGCGCGACCTGGCCTCGGCCTCCGTGGCACCGAGACACACGCCTTGCTCTGGTGATGTAGTGCCAACCTGTGTCTGTACCCTCCATCCCTTTCCCTTTACCCACAAGTCCAAGCCCAGGGACGAAATGGGCAGCAATCTGACAGATTTCAAACATgcgtttttggtttttttttcttttgttttttggcttTGGTTTATTCAAGGTGTCTGTATAAAAACTCATTTGAACTCATGCGGATGTGTCCCCGTGTCCTTTAATCCTCCATGTTTTTTCGTGCCATTGTAACCGTTTTTAATCTTCTCAGAGAAACTGCCAagttgtttagtttgttttaattctgtttCAAGAataagtgttgttgtttttttttagatttattttttagttcacTACTTATTACATTTCATACTGTCCCGTTACACTCCATTacagctacaaaaaaaaaggttttgccCGTTTCTTTTCAGATATCCACACACTCTCCATCACATTGGCCCAAAGAGcttttcttgttcttttttttccgtTTGTGGCACAGACGGCATTGCCGTGTTTGCTGTAGTAGTTTAACATCTACACTTGTTCAAGCACATACACACTCCAGTTGGACTGCTCGCTCACGTACGAGTCATTCAGCCTTACAGGGTTTATTTTCCTTTGTGATCCATGCCCGATTTCTGtcttcactctctctctatctcaaGAGTTACAAGTTGAGAAAGATTATAGAGATTATGATATCAAAATGGTATTTATAAACGgaacaaacaattaaa

Function

symbol description
ppp2r2ab Predicted to enable protein phosphatase regulator activity. Acts upstream of or within blood vessel lumenization. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Orthologous to human PPP2R2A (protein phosphatase 2 regulatory subunit Balpha).

NR:

description
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like

GO:

id name namespace
GO:0010458 exit from mitosis biological_process
GO:0050790 regulation of catalytic activity biological_process
GO:0007165 signal transduction biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250743.1 True 2698 mRNA 0.48 11 5892603 5906876

Neighbor

gene id symbol gene type direction distance location
prkab1a prkab1a,prkab1,LOC107713388,LOC107555518,LOC103357303 coding upstream 338963 5548705 ~ 5553640 (+)
phf24 phf24,LOC107677982,LOC107713387,LOC107744162 coding upstream 347015 5519168 ~ 5545588 (+)
pigo pigo,LOC107713385,LOC107686475,LOC107744133,LOC107687847 coding upstream 400874 5482765 ~ 5491729 (+)
slc20a1b LOC107686476,LOC107744132,LOC107687859,LOC107713386,LOC107555522 coding upstream 415598 5464957 ~ 5477005 (+)
drg1 drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524,LOC107687909 coding upstream 440648 5447331 ~ 5451955 (+)
bnip3lb bnip3lb,LOC107560522,LOC107678042,LOC107744138,LOC107687791,LOC107561399,LOC107720674 coding downstream 1137 5908013 ~ 5918050 (+)
dpysl2b dpysl2,dpysl2b,LOC107678023,LOC107560521,LOC107687778,LOC100705567,LOC108277094,LOC103362090,LOC108427246 coding downstream 14283 5921159 ~ 5942002 (+)
tmem230a tmem230,tmem230a,LOC107677999,LOC107744140,LOC103035677,LOC108427245 coding downstream 48235 5955111 ~ 5956835 (+)
igsf9a igsf9a,LOC107744139,LOC107678046,LOC107720681,LOC107687761,LOC107561402,LOC107560520 coding downstream 51963 5958839 ~ 5984926 (+)
vsig8a vsig8a,LOC107730417,LOC107678041,LOC107553719,LOC107688578,LOC107720793 coding downstream 225213 6132089 ~ 6139635 (+)
G75083 NA non-coding upstream 170576 5663157 ~ 5722027 (+)
G75081 NA non-coding upstream 229528 5657359 ~ 5663075 (+)
G75077 NA non-coding upstream 248837 5643549 ~ 5643766 (+)
G75076 NA non-coding upstream 249502 5642889 ~ 5643101 (+)
G75067 NA non-coding upstream 254367 5563703 ~ 5638236 (+)
G75097 NA non-coding downstream 303 5907179 ~ 5907527 (+)
G75102 NA non-coding downstream 35398 5942274 ~ 5975558 (+)
G75192 NA non-coding downstream 272330 6179206 ~ 6204921 (+)
LOC122352660 NA non-coding downstream 279271 6186147 ~ 6190440 (+)
G75230 NA non-coding downstream 635212 6542088 ~ 6544245 (+)
G75062 LOC107744182,LOC107678054,LOC107567441,LOC107713390,LOC107687817 other upstream 330518 5560651 ~ 5562085 (+)
ccl19b LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257 other upstream 392215 5498647 ~ 5500388 (+)
G74965 NA other upstream 633780 5256838 ~ 5258823 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other upstream 642466 5238279 ~ 5250137 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other upstream 769230 5116866 ~ 5123373 (+)
lrrtm4l1 lrrtm4l1,LOC107730422,LOC107553720,LOC107687748,LOC107720738,LOC107561403 other downstream 154315 6061191 ~ 6089587 (+)
LOC122352486 LOC107720590,LOC107677990,LOC107553711,LOC107705075,LOC107586209 other downstream 547189 6454065 ~ 6472107 (+)
trpc7a trpc7a,LOC107677994,LOC107720592,LOC107552051,LOC105905985,LOC108437819,LOC106603261 other downstream 1074616 6981492 ~ 6993621 (+)
G75422 pcdh1a6,LOC107677970,LOC107552011,LOC107677969,LOC107742394,LOC107720565,LOC107586182,LOC107742396 other downstream 1235417 7142293 ~ 7150581 (+)
LOC122352414 pcdh1a3,zgc:123181,pcdh1a4,LOC107742396,LOC107552012,LOC107586180,LOC107720566,LOC107720564 other downstream 1246710 7153586 ~ 7163223 (+)

Expression


Co-expression Network