rassf2b (LOC107720572,LOC107708653,LOC107687490,LOC107586133,LOC107678048)


Basic Information

Item Value
gene id rassf2b
gene name LOC107720572,LOC107708653,LOC107687490,LOC107586133,LOC107678048
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 6631681 ~ 6638407 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250753.1
CTGAGCTGCTTTCACCGACTGCTGGATTCTCCCACGTGTTGCTTGTACAGTAGGTCACCTGCTTTGTCGTCTCGAACTTCACAGACCTTCTTAGTGTCTCTCCACTCACTCAACATGGATTCAGACAAGGTCCAGATCGgcaaaaacaaatttataaGCAAGAGTATTCTTCTCTCACAGCTTAACACATACAACCTATATTACAAAGGAGAAGCCCTTCAGTTGAGACACAGAGAGGAGGAAGGAGAGTTGATCATTGAGGGTTTGCTCAATGTTTTTTGGGGTGTAAAGCGACCAATCAGACTGCAGATGCAGGACGAGAAAGAGGCAGACAGGCCACGCCCCTTATTAACATCTTCGAGCGCCGAAACAGACATCAGCACATTCAATGAGCTCGCTGCAGCAGATCGGTCAAAAGACCTCGAAGACAAAGATGAGGCAGATGAGGAGCAGCAGGACTCGACACACTCCGATCGTCTCGGCAGGACAAAGAGCGATGTCGGCGGGAAAAGGATTAGCGGAAGACGGCTCGGAATCAGAAGAGTCAAAAGAAACCGATGCTCCTTCAACGGCCACTTTTACAACCACAAGacgGCCGTTTTTACCCCTAAGTTCGGTTCAGTGACCAACGTCCGAGTCAACAGCTGTATGACGACAGCGCAGGTCATGCGGGTGCTGCTTAACAAGTTCAAGATCGAGAACAGCCCGGAGGAATTCAGCCTTTACATCGTCCACACCAGTGGAGAGAGACATCAGCTGAAGCCTAATGACCATCCACTGACCCTCAGAGTTATGCAAGGCCCTTGTGAACAGGTCAGCAAAATGTTCCTAATGGAGACGGACCAGGTGGAAGAGGTCACGCATGATGTGGCACAATACATCAAGTTTGAGCTTCCTGTTTTACAAAGCTTCATCACTAAGCtacaagaggaagaagaaagagaaatgcaGAAACTGAAGAAGAGGTATGCTGATATGCGGCGTATCATCAAGAAATACATGGTGTCAAATTCAACTACATGATTAAACCGTGCAAGCATCTTCATCTGAACACCATCATAAAGTGCCAACAAAATGGTGCTATCTCAGGAACAGGAAGTCAGATCTGACTTTTCAGTGAGACTTTTATATCATCCGGTATCATCAGGTATTATAATACAGCAAAACTTAGCGGTACTATGACTTTCTTTAAATAAGCTTCACAGCAGACTGTTACTCAGCCTTCTTTTTCCGAAAGGAAagcaaagtaatttttttttacaatgtttaacCACTCATgcacactgataataataattatataataataataataatctacaagaatgttaattaaaaaataatataatttagagCCCATGTTGTGTgaataaatagaatagaataaagtgaagaaaatatatttgttttatttaattccatgatattttataaatgaattataaagtatttaatgtgttttttgtaacaTGTTTCACAGTGTATGTGCACATTTTTGcccttaaaaataataaaaacattaagacaATTATTGAATTAGTTTTC

Function

NR:

description
PREDICTED: ras association domain-containing protein 2-like

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K09851 RASSF2_4; Ras association domain-containing protein 2/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250753.1 True 1545 mRNA 0.41 10 6631681 6638407

Neighbor

gene id symbol gene type direction distance location
nsd3 whsc1l1,LOC107720716,LOC107687514,LOC107705078,LOC107678004 coding downstream 30290 6580621 ~ 6601391 (-)
plpp5 plpp5,LOC107720719,LOC107678050,LOC107553701,LOC107705081,LOC107586127,LOC107687571 coding downstream 51733 6575421 ~ 6579948 (-)
ddhd2 ddhd2,LOC107553702,LOC107678022,LOC107586212,LOC107687560 coding downstream 56957 6567280 ~ 6574724 (-)
tacc1 LOC107678021,LOC107553704,LOC107720721,LOC107687537 coding downstream 68248 6543568 ~ 6563433 (-)
loxl2a loxl2a,LOC107720722,LOC107678026,LOC107553706,LOC107705082,LOC107687596 coding downstream 93686 6515997 ~ 6537995 (-)
kcnip3b kcnip3,kcnip3b,LOC107572711,LOC107678047,LOC107720714,LOC107687448,LOC108233759,LOC101482209,LOC108264878,LOC106535652 coding upstream 2586 6640993 ~ 6662838 (-)
pcdh1a LOC107564544,LOC107678039,LOC107708655,LOC107720713,LOC107586135,LOC108437809 coding upstream 96513 6734920 ~ 6806411 (-)
avd LOC107552052,LOC107677992 coding upstream 336794 6975201 ~ 6977380 (-)
LOC122353004 LOC107552052,LOC107677992 coding upstream 419304 7057711 ~ 7059761 (-)
fgf18b fgf18b,LOC107552074,LOC107742373,LOC107687415,LOC108437818 coding upstream 456238 7094645 ~ 7102080 (-)
G75294 NA non-coding downstream 249240 6380936 ~ 6382441 (-)
G75297 NA non-coding downstream 278797 6352535 ~ 6352884 (-)
G75209 NA non-coding downstream 354351 6272225 ~ 6277330 (-)
G75191 NA non-coding downstream 475905 6148920 ~ 6155776 (-)
G75190 NA non-coding downstream 483172 6145846 ~ 6148509 (-)
G75366 NA non-coding upstream 7517 6645924 ~ 6648670 (-)
G75429 NA non-coding upstream 391586 7029993 ~ 7082458 (-)
G75433 NA non-coding upstream 440148 7078555 ~ 7079365 (-)
G75445 NA non-coding upstream 469351 7107758 ~ 7231920 (-)
G75459 pcdh1a3,pcdh1a4,pcdh1a6,LOC107552014,LOC107720569,LOC107720570,LOC107742396,LOC107586180,LOC107677970,LOC107742394,LOC107742395,LOC107678002 non-coding upstream 489181 7127588 ~ 7148979 (-)
sprn2 LOC107578968,LOC107720715 other downstream 493 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 90708 6538122 ~ 6540973 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other downstream 1603168 5019307 ~ 5028513 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 2718939 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 3023893 3601612 ~ 3607788 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other upstream 538917 7177324 ~ 7180821 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 885787 7524194 ~ 7528558 (-)
G75562 LOC107675999,LOC107720693,LOC107677996,LOC107552059 other upstream 892454 7530861 ~ 7544090 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 1212614 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 1221815 7860222 ~ 7860303 (-)

Expression


Co-expression Network