golph3b (LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107562594)


Basic Information

Item Value
gene id golph3b
gene name LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107562594
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 685911 ~ 690128 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250755.1
CCATATTGAATAAGGAAATAAGAgtggaagaagaggaggaacgTCCCGGATGCATGTAAACATCCACGTCAACAGAAAGCGTATTAATGAAACAGTTATAGGGGCACGGAAGAGCGTAAATATAGGGATTATCGGCTCTGGCGGATGCACAGTTAAAAGACCGTTAAACGCGGTGGTGTTTTTAGGTTTGCGCGAACAATGACTTCCCTCACGCAGAGAAACTCGGGCCTGGTGCAGAGACGGACCGAGGCCTCGCGTAGCGCCGCCGCCGCGGAGAAGGAGAAGAGCCCCGGCGAGGATGAGCACGAGTCCCGCCGCGGAGAAGAGGACGAGGAAGACAAGGGAGACTCGAAGGAGACGCGGCTGACTCTGATGGAGGAGGTGCTGCTGCTCGGCCTGAAGGATCGAGAGGGTTACACGTCGTTCTGGAATGATTGCATATCTTCTGGACTGAGGGGCTGTATGCTGATTGAACTGGCCATAAGAGGACGCTTGCAGCTGGAGGCGTCCGGGATGAGGAGGAAAAGCCTGCTGACCAGAAAGGTGATCTGTAAATCGGACGCCCCAACCGGAGATATGCTGCTGGACGAGGCTCTGAAACACGTCAAAGAGACCCAGCCTCCGGAGACGGTCCAGAGCTGGATCGAGTTGTTAAGTGGTGAAACCTGGAATCCGTTGAAGCTGCATTACCAGTTACGGAACGTGCGCGAGCGCTTGGCTAAGAACTTGGTGGAGAAGGGCGTGCTCACCACGGAGAAGCAAAACTTCCTGCTTTTTGACATGACCACCCACCCGCTGACCAACAACACGGTCAAGCAGCGGCTGGTGCGCAAGGTCCAGGAGGCCGTCCTGGAGAAGTGGGTCAACGATCCCCAGCGGATGGACAAGCGTCTGCTGGCGCTGCTGTTCCTGGCGCATTCCTCCGACGTCCTGGAGAACGCCTTCGCTCCTCTGCTGGACGACCAGTACGATCTGGCCATGAAGAGGGTGCGGATGCTTCTGGATCTGGAGCCCGAGGCCGAAGCTGCCAAGTCGGGCGCCAACGAGCTGCTGTGGGCCGTGGTGGCCGCTTTCACCAAATGAACCTCCAGAGCCGAGAGAAACGGACTCCACTTTGTGCTCGTGGCGTTGGACTCGGAGCGCTGGCCCCAAGCTCGGTTGATTCGGACTAATAttggtgatggtgatgatggaAATACGAATTTTGAAGGTTGCTGACGAGGAGGATACTCGGAAAGGGACGGCTTTGTCTCATTGTCACAGATTTGTCTTCTCTGACCTTCACAACGGTGTTGCCCTGTCTACTTCAAAACGGCCAATAGTTGCTACATGATTGCAATTCACTGTGAGGCTTCTTGTAGTTCACGCACTTAGAtcataaagtaaaaaacaaaaaaaagagcgcATTGAGGGAGGCGGGTCTGTATTTAATAGGCCGCGACTCGAATCTCGGTATAATTCTACAGTTATCTCAAACTCTGTGTATAAGGAGTTCTCGAACGCACAGGTTTGTCGTGGTTGCACAAAAACGCCCCGTTTCTGGTTGTATTTGCATATTCAGCAGGAAATTAAATGGGCGTCGAGTTGAAGGAAAATAAACCGCTTCACATTTCAAAAGACTGAAAAGCGAGCGCCGGGTTTTCTCCGGTGCTCTAAAGAAAACGCCGCTTCCTCGCAAGTCTTCTTTCCAGAAATGCTCGAAGAATAAAACGTTCTAATGTGTGCTGatgattcagttttttcttgtcgtttttttttttttttggcttggtGGTCGGCCCGTGTATGAACTCCACGGGGATCGTTCTATTCCTCTCAGCCTTTCTGTTCTTGGTTGGGCTGATCGAATCTGGTTCGTCTCTCCAATGCAAGATCGGTCCGGTCTGATAACGCGCCACAAACCAGGCGAGGAAGCGCAGAGCTCACGAAAACACCTTAAATCAAACGCACGGGTTTAAGTTGCCTCGTAACTTCGGTTCATTTCACGCTAAAGGCCAGTCAAACACTAGCACAGCCCCTGCTTTAAGAAAAGCCTTTTCATAGTGATCCCTGCATCCATGTAGCCGTCTcctcacatgcacacatatatatatatggttttctTCATCTCAATCTCTCGCTATATTTCCAATTTTTGTACCATGTTTTtaatcctttttattttgttccttCCTTTAGCCGTTAGCACAATATTTCAGAGTCGTTTGTCCTGTTTTTGTTCGTCTCTTGTTCTGAAGGAGGACAGGTAAAGCGCGGGACGGGGATACGCTCTTCCTCTGAAAGCACGCCGGTCTTTGACATGATGATATACTGTTAGTGAACAATAATTAATGAGCTGTAAAAGTAGAGATGGTGTGAAACGGACGCCCTGATTTGTACATCTGCTTTTTATCATATAATAAAGGAATATCTTTAAGTGCCTGGAAGGTATATGAATATTA

Function

NR:

description
PREDICTED: Golgi phosphoprotein 3-like isoform X1

GO: NA

KEGG:

id description
K15620 GOLPH3, GPP34; golgi phosphoprotein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250755.1 True 2441 mRNA 0.50 4 685911 690128

Neighbor

gene id symbol gene type direction distance location
tctn1 LOC107686437 coding downstream 63762 617030 ~ 622149 (-)
csgalnact1a csgalnact1,csgalnact1a,LOC107713273,LOC107686490,LOC107685172,LOC107562546 coding downstream 74648 579303 ~ 611263 (-)
plpp1a plpp1,plpp1a,LOC106561845,LOC107686491 coding downstream 108688 564059 ~ 577223 (-)
dhx29 dhx29,LOC107744100,LOC107686439,LOC107713347,LOC107562543 coding downstream 149952 521051 ~ 535959 (-)
LOC122352790 LOC107686441,LOC107744170 coding downstream 164971 515783 ~ 520940 (-)
LOC122352658 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090 coding upstream 100144 790272 ~ 792344 (-)
LOC122352659 mocs2,LOC107713337,LOC107744090 coding upstream 102195 792323 ~ 793795 (-)
arl15b arl15b,LOC107595536,LOC107713334,LOC107686429,LOC107744085,LOC108433533,LOC107597630 coding upstream 118924 809052 ~ 843011 (-)
LOC122352985 LOC107744083,LOC107597627,LOC107713333,LOC107685138,LOC107595562 coding upstream 157897 848025 ~ 862773 (-)
anxa3b anxa3b,LOC107686424,LOC107597622,LOC107713328,LOC107595539,LOC107685135 coding upstream 212924 903052 ~ 908173 (-)
G73643 NA non-coding downstream 17187 668335 ~ 668724 (-)
G73624 LOC103390470 non-coding downstream 50183 627778 ~ 635728 (-)
G73623 NA non-coding downstream 106765 578060 ~ 579146 (-)
G73619 NA non-coding downstream 135623 549195 ~ 550288 (-)
G73613 NA non-coding downstream 161041 524290 ~ 524870 (-)
G73684 NA non-coding upstream 52600 742728 ~ 743650 (-)
G73661 NA non-coding upstream 73755 763883 ~ 765652 (-)
G73704 NA non-coding upstream 105832 795960 ~ 796182 (-)
G73709 NA non-coding upstream 114614 804742 ~ 804954 (-)
G73799 NA non-coding upstream 182936 873064 ~ 873900 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other downstream 289291 359804 ~ 396620 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 594590 40690 ~ 91321 (-)
G73662 NA other upstream 3320 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 99295 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 195028 885156 ~ 888012 (-)
G74058 NA other upstream 755195 1445323 ~ 1448886 (-)
G74031 NA other upstream 776623 1466751 ~ 1473878 (-)

Expression


Co-expression Network