tbl2 (tbl2,LOC107691705,LOC107734476,LOC107728824,LOC107686137,LOC107578663)


Basic Information

Item Value
gene id tbl2
gene name tbl2,LOC107691705,LOC107734476,LOC107728824,LOC107686137,LOC107578663
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13056071 ~ 13060135 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250777.1
AAACGGTTTCCCTGCCGAGACTCCAGGTGGCGCTAAGAGCCCTAACTTCACCAAAATCCCTCACTCCACAAAGAAGAGGATCTCGCGGCTGCGCGGTGGGGGCTGTCGCGTAACGACCGAGAAGTTTGATGCACAAGCACAGCCGGTGAAGATCACAGTTATGTGTTGCAGCAGTCAAGCTGCCAGCGAGTCACTGAAGTGAAGTGGAACTAAGTGCGACTCGAGTTATACcgcgaagagagagagagacccctCCGCAGTTTCACAGCCAGTCTCTGGGTCTGCTTGCTCGTGTCAAGAGTGAAACGTGGCACAGATCTCGCCAAGATGGAGTTTGCGGCGATCTTTGCACTATCGCTGCTGATAGGCGCGCTGGTGTTGTTAGTGGCCGTGGCTGTTGGCAGACAAAAAGGCGAGTTGTCCGAGCAGAACGAGCAGAAGAAAGACGCTAGTGCGCCGGTGGAGGAAAATGCAGCGAAAGCGTCTTCCAAAAAGCAAAAGCATCAACAGCGCCCCCGTAAGGAGAAACCGCAGCAGCACACGTTCTCGCACAGTCTACTGGCTTCCTCTCTGAAGAATCACAATGGTAATGTCACCTGTCTGGATTTTAGTAGCAATGGCAAGTACCTCGCGTCTTGCTCGGATGACCGTACCATTAGGATCTGGAGCACTAAAGACTTCCTGGATCGAGATCACAAGTGCTTGCGGGCCAACGTTGAGTTTGACCACGCCACACTCGTCTGCTTCAGCCCAGACTCTCGAGCATTTATCACTTGGCTGGCTAATGGAGAGACCATTCGCATCTATAAGATGATTAAAAAGGATGATGGGACTTTCAGTTTCAAAGCTGCCTCAGAGGATTTCCCTCAGAAACACAAGGCGGTCGTTATTAACATCGGAATCGCAGAGACAGgcAAATTTATAATGTCTGCCTCTGTTGACACCACCATTGTGATCTGGGATCTGAAGGGAGAGGTTTTAGCTTCCATCAACACGAATCAGATGACCAACTCGCATGTTGCTGTGTCGCCTTGTGGaagGTTTGTTGCTTCCTGTGGCTTTACCCCTGATGTGAAGGTGTGGGAGGTTTGCTTTGCCAAATCAGGGGAGTTCAAAGAGGTCACCCGTGCCTTTGACCTTAAGGGACACTCGGCTGGGGTTTACTCCTTTGATTTCTCCAATGACTCTCGGAGAATGGTGACTGTGTCTAAAGACGGCACATGGAAGCTGTGGGACACAGATGTGGAGTATAAGAAAAAGCAGGACCCATATTTGCTCCGGACCGTGCCATGTCAGGTGTCGGAGGGGAGCCGCATTGCCTTGTCTCCTGACGGTCGTGTAGTAGCCATATCGAATGGTTGTGATATAGCCATGTACAGTGCCAGCACTGGTGAACTAGAGGAGGAGTTTCACGGTGTTCACAGCGAAGAGATAACCGACCTGAAGTTTGACATCAACAATCGTTTCTTAGTGAGTAGTGGGGACCGTGCCATTCGTGTCTTTCACAATGTGACCGGTTACCGCTCTGCTATCCAGGACATGCAGACCATGCTGAAGAAGGCCTCAAATGATGGAGTGAGACAGAGACTCCAGCAGCAGATAACAGATGCTCAGAATGCTCTGGACACAGTGCTGAATGATACAAAGAACTAAAAGCTGATTTGTTTTCTCTGGAAATCTAgtctgtttttggttttagaaTTAAGTTGCTTTAGCATGctgattttattgaataaattggGTATTTTTAA

Function

symbol description
tbl2 Is expressed in yolk syncytial layer. Orthologous to human TBL2 (transducin beta like 2).

NR:

description
PREDICTED: transducin beta-like protein 2

GO: NA

KEGG:

id description
K23325 TBL2; transducin beta-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250777.1 True 1751 mRNA 0.50 8 13056071 13060135

Neighbor

gene id symbol gene type direction distance location
bcl7ba bcl7ba,LOC107691704,LOC107734433,LOC107579048,LOC107686216,LOC107728825,LOC107589759,LOC107682804 coding downstream 695 13052114 ~ 13055376 (-)
LOC122353147 LOC107686215,LOC107588848,LOC107728832,LOC107691662,LOC101885935,LOC107578652,LOC107734424 coding downstream 4708 13036034 ~ 13051363 (-)
cux1a cux1a,LOC107728840,LOC107588830,LOC107734438,LOC107691661,LOC107686135,LOC107577496 coding downstream 27261 12915183 ~ 13028810 (-)
kctd7 kctd7,LOC107588867,LOC107686134,LOC107734471,LOC107577526,LOC107691660 coding downstream 143539 12908571 ~ 12912532 (-)
rabgef1 rabgef1,LOC107734461,LOC107577469,LOC107728875 coding downstream 147632 12901052 ~ 12908439 (-)
prdm15 prdm15,LOC107686138,LOC107728867,LOC107691664,LOC107734478,LOC107578663,LOC108413920 coding upstream 577 13060712 ~ 13070717 (-)
LOC122352956 LOC107728869,LOC107686140,LOC107734465,LOC107691665 coding upstream 11256 13071391 ~ 13084252 (-)
ska2 ska2,LOC107588916,LOC107728893,LOC107686141,LOC107734479,LOC107577568,LOC107691666 coding upstream 34448 13094583 ~ 13098870 (-)
il2rga LOC107728855,LOC107686149,LOC107589463 coding upstream 91820 13151955 ~ 13156088 (-)
si:dkey-18a10.3 LOC107588952,LOC107686147,LOC107735317 coding upstream 96009 13156144 ~ 13161519 (-)
G77157 NA non-coding downstream 20486 13033741 ~ 13035585 (-)
G77135 ppm1e,LOC107728886,LOC107686131,LOC107588822,LOC107734442,LOC107691656,LOC107577402 non-coding downstream 175336 12796664 ~ 12880735 (-)
G76912 NA non-coding downstream 377446 12678367 ~ 12678625 (-)
G76902 LOC107746985,LOC107751382 non-coding downstream 445973 12605219 ~ 12610098 (-)
LOC122353234 NA non-coding downstream 602420 12448542 ~ 12453651 (-)
G77208 NA non-coding upstream 150481 13210616 ~ 13210946 (-)
G77220 kl,LOC107577734,LOC107589796,LOC107728890 non-coding upstream 253059 13313194 ~ 13315574 (-)
G77245 NA non-coding upstream 268507 13328642 ~ 13328893 (-)
G77284 NA non-coding upstream 426132 13486267 ~ 13488833 (-)
LOC122352841 NA non-coding upstream 488119 13548254 ~ 13556657 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 266976 12782353 ~ 12789095 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other downstream 286654 12678990 ~ 12769417 (-)
ccdc83 NA other downstream 1471111 11505310 ~ 11584960 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 1848819 11176569 ~ 11207252 (-)
G76625 NA other downstream 2017340 11017110 ~ 11038731 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 432138 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 478021 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 583049 13643184 ~ 13654413 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other upstream 745969 13806104 ~ 13807819 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 1142127 14202262 ~ 14204127 (-)

Expression


Co-expression Network