epob (epob,LOC107676014,LOC107586154,LOC107742357)


Basic Information

Item Value
gene id epob
gene name epob,LOC107676014,LOC107586154,LOC107742357
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7681895 ~ 7686300 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250815.1
TTGAGCTCAAATCTGCGCGGTCTGCAGCAAACGTGGGGCGCAAAAAggaacaaaacccatttaaGAACATTATGCACAGTAAAAATGCACCTTGCGAATGCAAACGTTTCCAGGTTTGGTGTCAGTTTTGGTAGTGTTTGTGTGGCTGGGTGGAAACCAGGTCTCCCCTCTCAGACCTATCTGTGACCTGAGGGTTCTGGACCACTTTGTACGAGAAGCCCGAGATTCTGAGGTCATCATGGTGAGGTCTCTATGTGCTTCACACAGAATGTCAGGTTATTTTCAAAACCATCACctcatctgtttttttcccccctctcaGCGTGGTTGCAGAGGTGGCTGCGGAGAGATGAAATCCTATTTAGTTCCTCTGACTAGTGTTGACTTTGCTGTTTGGGAGCATGTAGATGTTCACAGGCAGGCTGTGGAGGTCCAGACTGGTCTGTCTCTGCTCGATCAGGCCCTgagtaatgcaataaaaacagtgaGCAACTCTCCTTTGGCCAGCGCACTGGAAAACAACATCAGTAACATTCACAGCCTCGGCCAGATCCTTCACAGTCTTGATTTACAGCAGGCCAGGTCCACAGTTCTTCCAGATGATTCAGCTCCTGCCAGCACACAGACGCAGGAGGTCTCCTCTCTCCCAGAACTTCTGCAGGTGCAGAGCAGTTTCCTGCGAGGGAAAGTCAGACTCCTGCTTTCAGCTGCACCAGCCTGCCAACGGCAAAACAGCTGATGCGAGCTCAGAGGAGCTCGGGAGCTGTTTACAGCagtcacacatacacaacaaaCCCGGACAAGAACACTTGATTGTGACTCGTTAAAACCTTAAAGAGCTTATGCGCTCCAGGTGTCGCTCTTCAAATGGTCTTCTGCATTCGAAAGCCCGCAGTCATGTTTCTAAAGTATGCATCATGCGGTGGGAGAAGCAAAACTGCAGTGACACCTTGACTTATTCAACAAGGCGAACGTGGCACAAGATCCAGCAGAGGAACATTTCAGAGCCCATAAGTGGACTCGAAGGGTTATATCAGTGTGGCGAACAGCTTGTCTGGCTGCATCCAGCCACCTGGACTACAGTACATCTgagacttttatttaattatatttgtacgTTCCGTTTTCTACAAATCCATGAATTGTGCTGCTATTGGTTCACTTTTTAGTGGGCAGTGTACGATCTCTACGGTGTGTGCGTTTTAGGGCAGGATCAAAGGTCTTTTTTTGAGGGTTCAGCAGGGTTTGCCTTGTGGACACAATG
>XM_043250816.1
TTGAGCTCAAATCTGCGCGGTCTGCAGCAAACGTGGGGCGCAAAAAggaacaaaacccatttaaGAACATTATGCACAGTAAAAATGCACCTTGCGAATGCAAACGTTTCCAGGTTTGGTGTCAGTTTTGGTAGTGTTTGTGTGGCTGGGTGGAAACCAGGTCTCCCCTCTCAGACCTATCTGTGACCTGAGGGTTCTGGACCACTTTGTACGAGAAGCCCGAGATTCTGAGGTCATCATGCGTGGTTGCAGAGGTGGCTGCGGAGAGATGAAATCCTATTTAGTTCCTCTGACTAGTGTTGACTTTGCTGTTTGGGAGCATGTAGATGTTCACAGGCAGGCTGTGGAGGTCCAGACTGGTCTGTCTCTGCTCGATCAGGCCCTgagtaatgcaataaaaacagtgaGCAACTCTCCTTTGGCCAGCGCACTGGAAAACAACATCAGTAACATTCACAGCCTCGGCCAGATCCTTCACAGTCTTGATTTACAGCAGGCCAGGTCCACAGTTCTTCCAGATGATTCAGCTCCTGCCAGCACACAGACGCAGGAGGTCTCCTCTCTCCCAGAACTTCTGCAGGTGCAGAGCAGTTTCCTGCGAGGGAAAGTCAGACTCCTGCTTTCAGCTGCACCAGCCTGCCAACGGCAAAACAGCTGATGCGAGCTCAGAGGAGCTCGGGAGCTGTTTACAGCagtcacacatacacaacaaaCCCGGACAAGAACACTTGATTGTGACTCGTTAAAACCTTAAAGAGCTTATGCGCTCCAGGTGTCGCTCTTCAAATGGTCTTCTGCATTCGAAAGCCCGCAGTCATGTTTCTAAAGTATGCATCATGCGGTGGGAGAAGCAAAACTGCAGTGACACCTTGACTTATTCAACAAGGCGAACGTGGCACAAGATCCAGCAGAGGAACATTTCAGAGCCCATAAGTGGACTCGAAGGGTTATATCAGTGTGGCGAACAGCTTGTCTGGCTGCATCCAGCCACCTGGACTACAGTACATCTgagacttttatttaattatatttgtacgTTCCGTTTTCTACAAATCCATGAATTGTGCTGCTATTGGTTCACTTTTTAGTGGGCAGTGTACGATCTCTACGGTGTGTGCGTTTTAGGGCAGGATCAAAGGTCTTTTTTTGAGGGTTCAGCAGGGTTTGCCTTGTGGACACAATG

Function

symbol description
epob Predicted to enable cytokine activity. Predicted to be involved in nucleate erythrocyte development. Predicted to act upstream of or within erythrocyte maturation. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); diabetic angiopathy; familial erythrocytosis 5; ischemia (multiple); and neurodegenerative disease (multiple). Orthologous to human EPO (erythropoietin).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250815.1 True 1264 mRNA 0.48 4 7681895 7686300
XM_043250816.1 False 1183 mRNA 0.49 5 7681895 7686300

Neighbor

gene id symbol gene type direction distance location
fgf11b fgf11b,LOC107677987,LOC107586150,LOC107720691,LOC107676016,LOC103026543,LOC108443340 coding downstream 93036 7549993 ~ 7588859 (-)
cldn7b cldn7b,LOC107586151,LOC107676017,LOC107678043,LOC107720692,LOC107552057 coding downstream 137831 7539280 ~ 7544064 (-)
LOC122352928 LOC107675999,LOC107720693,LOC107677996,LOC107552059 coding downstream 148873 7531145 ~ 7533022 (-)
LOC122352925 LOC107551999,LOC107677957 coding downstream 158761 7519599 ~ 7523134 (-)
ponzr10 LOC107552045,LOC107742363 coding downstream 162774 7514651 ~ 7519121 (-)
LOC122353013 LOC107677955,LOC107554294,LOC100002544,LOC106563379 coding upstream 1841 7688141 ~ 7689495 (-)
zgc:172339 zgc:172339,LOC107720553,LOC107586200,LOC107742407,LOC107676025,LOC107554295,LOC107677954 coding upstream 6546 7692846 ~ 7694916 (-)
pcolcea pcolcea,LOC107720687,LOC107554310,LOC107678009,LOC107586222,LOC107676034 coding upstream 137109 7823409 ~ 7829584 (-)
per1a per1a,LOC107678008,LOC107742351,LOC107676011,LOC107586160,LOC107720685 coding upstream 146809 7833109 ~ 7849187 (-)
and3 LOC107742405,LOC107676004,LOC107586202 coding upstream 176310 7862610 ~ 7865286 (-)
G75633 NA non-coding downstream 65711 7609140 ~ 7616184 (-)
G75549 NA non-coding downstream 193328 7487473 ~ 7488567 (-)
G75548 NA non-coding downstream 194785 7486212 ~ 7487110 (-)
G75537 NA non-coding downstream 229844 7450667 ~ 7452051 (-)
G75533 NA non-coding downstream 309977 7370932 ~ 7371918 (-)
G75654 NA non-coding upstream 1394 7687694 ~ 7687973 (-)
G75666 NA non-coding upstream 74533 7760833 ~ 7761098 (-)
G75667 NA non-coding upstream 75225 7761525 ~ 7763853 (-)
G75749 NA non-coding upstream 411006 8097306 ~ 8099806 (-)
G75767 NA non-coding upstream 479148 8165448 ~ 8165708 (-)
G75562 LOC107675999,LOC107720693,LOC107677996,LOC107552059 other downstream 137805 7530861 ~ 7544090 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other downstream 153337 7524194 ~ 7528558 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other downstream 501074 7177324 ~ 7180821 (-)
sprn2 LOC107578968,LOC107720715 other downstream 1050707 6628425 ~ 6631188 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other downstream 1140922 6538122 ~ 6540973 (-)
vamp2 mpp1,vamp2,LOC106603197,LOC106563390,LOC106523110,LOC107386619,LOC107554313,LOC107742350 other upstream 164721 7851021 ~ 7859714 (-)
trnal-aag_32 NA other upstream 173922 7860222 ~ 7860303 (-)
trnal-uag_2 NA other upstream 175985 7862285 ~ 7862366 (-)
rnasekb rnasek,LOC107554319,LOC107720683,LOC107676000,LOC107586166 other upstream 197042 7883342 ~ 7885482 (-)
cadm2a cadm2a,LOC107720667,LOC107708610,LOC107675986,LOC107554325 other upstream 316061 8002361 ~ 9032489 (-)

Expression


Co-expression Network