LOC122352997 (LOC107711241,LOC107672456,LOC107588012,LOC107670466,LOC107757355,LOC107567234)


Basic Information

Item Value
gene id LOC122352997
gene name LOC107711241,LOC107672456,LOC107588012,LOC107670466,LOC107757355,LOC107567234
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 5058497 ~ 5067537 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250822.1
cAAAAACTGTTTGCtagtttgtaaatgtaaaacctCTGGTTTTTATATTCCATCTGAAGCCTGACTGGGTTATGCTCAATAATAATGATCCTTAACGAAAGCTAAAATTCTGAAATGGTCCAGTCAGATTCCAGAATTAAACCCCAACAAAGTATGGTTAAAGTGTCAGGATCTGTGGAACACATTTCACGCTTCAACGCCTACAAATGTCACTGGGCTGAAGCAGTTCTGCAAGCAGAAGTGTGCCAAAATTCCCCACGTATAAATAACTACAGTAAACATTTGGTTGCGGTTATTGCTGCTAATGGGGGTGCAACCAGATACTGGCTACACCTCCATTAGCAGCATTACATACAAATAGCGCTGAATGTTTTATAACCATctttaatgaatgcatgaaaGATTCAACTTGTTGTGTTGTTTATAAGAATTCATGAAAGAGTTCGGATGAAATTCCAGGGGAAGGGGGCAAAAACTTTTTCCAAACCGTTGTTCTTGCCAGTTCAATGCAGTTTATGTGTACtgggttttaatttttcttatgAGGTGTCACACATTATCTTCTCCAATGGAATAAGAAAATCTTGACACACTTCCTCTTACGTCAGTACCGGGGTCGAATCGCGCTCCAGGAGATTGATGTTACATAATGCAATGTTTCGGCATTCATCAGAAGATATCATGTGTCGGCCTAGACTTCGCTGAGTGATGTATACACCGAGTAAATACAGGAGCCAATCAGAAGACAGCTCTCCCAAGGGTAATTTCAAGCGGGAGGGAGGGCTAAGTATCCCCTTGTGACCCAACTGGGCAATGAAGGGCTCAAAGGAACAATGGCCTCCAAGCAGTCAGATCTTGCAGAAGACTTGTCATGTCCCATCTGTGGAAGTATCCTGCAAAAGCCCGTAGTGCTGTTTTGCAGACATCACTTCTGTAAACACTGTTTGGAGAGCCTGTGGATTGGTGGGGGATCTTGCGAATGCCCCCTCTGCTGTCAGCCATCATCTATGGGGGAGCTCATAGTCAACGCCACACTTGCGAAGACCTGCGAAGGCTTTCTGGAGCGCTGCAGAAATGACCCTCTTGCTTGCAAGGAACATGGCGAAGCCTTGACACTCTTCTGTTTGGAGGACCTGGAACCCACTTGTAGCAAATGCAAATCTTCTGCCCACCACAAGGGTCACAGGTTATACCCCTTAAATGAAGCTTCACATGACTGCAAGGAGGAACTCAAAAATGCTTTGAAACCACTTCAGGAAAAACTAAAGCTCTTCCGGAAGGCAAAACTCACTTGCGAGCAAACAATACACCACATTAAGAGTCAGGCAGAGAACGCCGAGAGGCAGATACGAGAGGAGTTTGAGGCTCTGCACCAGTTCCTGCGAGACGAGGAGGCATCCAGGCTTTCCATGCTGAAGCAAGAGAAGGATCAGAAAAGGCAGATGATAAATGATAAGGTTGAAGATTTGGAGAATGACATCACTTCACTTAGCAACACTATCAGAATAGTTGAACAGGAGATGATGTCTAAGGATGTACCATTCCTCAAGAATTATAAAGACACCATAAAGAGAACCTGGCGTATTCCCCAGGATCCACAGATGATAACAGGTTCCCTGCTCGATATAGCCAAACATCTAGGCTCACTGAAGTTTAAAGTCTGGGAAAGAATGATGGAAATCATTCAATATACTCCAGTGACCCTCGATCCAAACACTGCGGCAAGCTGCTTCCTCCTGTCAGAGGATCTGACTACAATACAGTGCTGCGCTCAGACCTTCAAACTCCCAGAAAACCCTGAGCGCTTTGACATAGGTGCAGAGGTGCTGGGCTACGAGGGCTTCAGCTCGGGGCGACACAGCTGGGACGTGGAGGTCAAAAACAACACCTACTGGGTCATTGGAGTCGCAAGCGCATCCATCAGCCGGAAGGGAAAGCACGTGTTGACCCCTGCAGAGGGCTTCTGGACCATTAGGCTACGAAACGGAGAGTATAAAGCCTGCACCGCCCCATGGTCCCCGCTCACTATGACTAAGGAGCCGCAGGTGGTGAGGATCGTGTTGGACATGAACAGGTCAAGAGTGACTTTCTACGACCCACGAGAAAGAACGCCTCTCTTCACCTTCATGGACATCATCACTCCGAGAGCATTCCCATACTTTTGCAGCGCCTGTAAGGAGCACCCCTTGAAAGTGCTGCCAGCCTGGATCTCTATCAAGACAGACTGATGAGAAGAACGTCCCTCTCAGCATTTCTTTCCTCTAGTCTCTCCTCGTGTTTCTTTTGAGTGAGCTAGGATGGAAATACACTTCAGTTCTACTTGTTTCGGATTTCGAACCTGACGACCTGGACAGCTTACTTAAAGGGGTGTCGAGATATACCCATATTGAAGATGATATTGACATTGggaaaaattaatattaaatgttgacTGTATTACACTATAATGCTGgttgttactta
>XM_043250823.1
TAACACTTAGGATAGATGAGACGGCATCTGTACCGCTCATATCAACAGAGAAAATGGAGGACGATTCGCCGCTCTTAGAGGAAGACCCTTGTTGTTCGGTGTGTGGGGAAGTGTTCGGTGTTCCAGTGGTCCTGTGCTGTATTTCCTGCGGGTGCAGCTTTTGTGAAATTTGCTGTCAGCAGTTTTGGGAGGCGCAATGTCCCTTCTGCAGAAAAGGGGCCTCTGGATCCCATCTCAGAAAGTTCAGGGCGCAAAGACTAAAGGAGGAACTCAAAAATGCTTTGAAACCACTTCAGGAAAAACTAAAGCTCTTCCGGAAGGCAAAACTCACTTGCGAGCAAACAATACACCACATTAAGAGTCAGGCAGAGAACGCCGAGAGGCAGATACGAGAGGAGTTTGAGGCTCTGCACCAGTTCCTGCGAGACGAGGAGGCATCCAGGCTTTCCATGCTGAAGCAAGAGAAGGATCAGAAAAGGCAGATGATAAATGATAAGGTTGAAGATTTGGAGAATGACATCACTTCACTTAGCAACACTATCAGAATAGTTGAACAGGAGATGATGTCTAAGGATGTACCATTCCTCAAGAATTATAAAGACACCATAAAGAGAACCTGGCGTATTCCCCAGGATCCACAGATGATAACAGGTTCCCTGCTCGATATAGCCAAACATCTAGGCTCACTGAAGTTTAAAGTCTGGGAAAGAATGATGGAAATCATTCAATATACTCCAGTGACCCTCGATCCAAACACTGCGGCAAGCTGCTTCCTCCTGTCAGAGGATCTGACTACAATACAGTGCTGCGCTCAGACCTTCAAACTCCCAGAAAACCCTGAGCGCTTTGACATAGGTGCAGAGGTGCTGGGCTACGAGGGCTTCAGCTCGGGGCGACACAGCTGGGACGTGGAGGTCAAAAACAACACCTACTGGGTCATTGGAGTCGCAAGCGCATCCATCAGCCGGAAGGGAAAGCACGTGTTGACCCCTGCAGAGGGCTTCTGGACCATTAGGCTACGAAACGGAGAGTATAAAGCCTGCACCGCCCCATGGTCCCCGCTCACTATGACTAAGGAGCCGCAGGTGGTGAGGATCGTGTTGGACATGAACAGGTCAAGAGTGACTTTCTACGACCCACGAGAAAGAACGCCTCTCTTCACCTTCATGGACATCATCACTCCGAGAGCATTCCCATACTTTTGCAGCGCCTGTAAGGAGCACCCCTTGAAAGTGCTGCCAGCCTGGATCTCTATCAAGACAGACTGATGAGAAGAACGTCCCTCTCAGCATTTCTTTCCTCTAGTCTCTCCTCGTGTTTCTTTTGAGTGAGCTAGGATGGAAATACACTTCAGTTCTACTTGTTTCGGATTTCGAACCTGACGACCTGGACAGCTTACTTAAAGGGGTGTCGAGATATACCCATATTGAAGATGATATTGACATTGggaaaaattaatattaaatgttgacTGTATTACACTATAATGCTGgttgttactta

Function

NR:

description
PREDICTED: zinc-binding protein A33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250822.1 True 2463 mRNA 0.46 6 5059768 5067537
XM_043250823.1 False 1503 mRNA 0.48 6 5058497 5067537

Neighbor

gene id symbol gene type direction distance location
si:dkey-210j14.3 LOC107672496,LOC107757375,LOC107711244,LOC107711245 coding upstream 9348 5046251 ~ 5049149 (+)
LOC122352867 LOC107711243,LOC107672495,LOC107587952,LOC107757372,LOC107567248,LOC107670491 coding upstream 12959 5038846 ~ 5045538 (+)
LOC122352868 LOC107587995,LOC107711162,LOC107672432,LOC107757375,LOC107587996 coding upstream 19992 5035033 ~ 5038505 (+)
LOC122352870 NA coding upstream 24013 5032154 ~ 5034484 (+)
hint1 hint1,LOC107665476,LOC107684867 coding upstream 143882 4912471 ~ 4914615 (+)
sppl3 sppl3 coding downstream 265473 5333010 ~ 5357455 (+)
kcnn2 si:dkey-76p7.5,kcnn2,LOC106564970,LOC107687918,LOC107686472,LOC107567448,LOC106563202 coding downstream 344146 5411683 ~ 5446436 (+)
drg1 drg1,LOC107744129,LOC107567440,LOC107713382,LOC107555524,LOC107687909 coding downstream 379794 5447331 ~ 5451955 (+)
slc20a1b LOC107686476,LOC107744132,LOC107687859,LOC107713386,LOC107555522 coding downstream 397420 5464957 ~ 5477005 (+)
pigo pigo,LOC107713385,LOC107686475,LOC107744133,LOC107687847 coding downstream 415228 5482765 ~ 5491729 (+)
G74889 colgalt1,LOC106607427,LOC106600909 non-coding upstream 37696 5019196 ~ 5020801 (+)
G74882 NA non-coding upstream 56055 5000682 ~ 5002442 (+)
G74873 NA non-coding upstream 108640 4949549 ~ 4949857 (+)
G74871 NA non-coding upstream 117195 4940998 ~ 4941302 (+)
G74870 NA non-coding upstream 130358 4927879 ~ 4928139 (+)
G74902 LOC107560569,LOC107739969 non-coding downstream 6391 5073928 ~ 5074206 (+)
G74906 NA non-coding downstream 19743 5087280 ~ 5087591 (+)
G74908 NA non-coding downstream 30107 5097644 ~ 5098564 (+)
G74914 NA non-coding downstream 40248 5107785 ~ 5108114 (+)
G74958 NA non-coding downstream 168062 5235599 ~ 5235955 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other upstream 529495 4481267 ~ 4529002 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other upstream 938050 4013034 ~ 4120447 (+)
cdc42se2 cdc42se2 other upstream 1363901 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 1390491 3663912 ~ 3668006 (+)
si:ch73-234b20.5 si:ch73-234b20.5,LOC107702596,LOC107558257,LOC107653492,LOC107573851,LOC107732123,LOC108440734 other upstream 1454281 3596606 ~ 3604216 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 49329 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 170742 5238279 ~ 5250137 (+)
G74965 NA other downstream 189301 5256838 ~ 5258823 (+)
ccl19b LOC107744181,LOC107677997,LOC107567444,LOC107555521,LOC107713300,LOC107688602,LOC107713257 other downstream 431110 5498647 ~ 5500388 (+)
G75062 LOC107744182,LOC107678054,LOC107567441,LOC107713390,LOC107687817 other downstream 493114 5560651 ~ 5562085 (+)

Expression


Co-expression Network