ggt1b (ggt1b,LOC107758666,LOC107689091,LOC107602052,LOC107658554)


Basic Information

Item Value
gene id ggt1b
gene name ggt1b,LOC107758666,LOC107689091,LOC107602052,LOC107658554
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16081970 ~ 16095356 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250855.1
CAACCTGTGCCCTTGTCCCATAAAACAATTATGGATGATTTCACTGACTGATTTAGTTAAATTTTGATGGCCATCATATTTAGACATTGAGAGCTTTACAGCGTTGTCTCAGTCAGCCTGCGGAGAGGAGGCTCGTTCTATTGGAGACTCTACAAGAGGCCTGTGAAGTCTACAGGGAAATGGTGCAGAAGTCTACAGTGGTGGGCCTCACTTTGCTGCTGCTGGCTGCAGTCGGCACGTTTTTGGCCATTTTCTTTTCGGTGCAGGGCAAGAAGGCTTCCCCTGAACCTGAACCTGAAAATGGTTACTTCAAGGCGGCGGTGGCAGCAGATGCTGGGACGTGCTCAGAGATCGGCAGGGATATCCTGAAGAGAGGCGGTTCCGCTGTAGATTCTGCCATCGCTGCTCTGCTGTGCGTGGGATTGATGAATGCCCACAGCGCGGGCATCGGAGGAGGGCTCTTCTTCACTATTTATGATGCCAAAACAGGAAAAGTGGAAACCATCAATGCGCGTGAGACGGCACCCGCAAACGCAACCAGAGACATGTTTGGAAATAGTACAGACCTTTCCCAGAAAGGTGGTTTGTCCATCGCTGTTCCCGGAGAGATTAGGGGGTATGAAATGGCCCATAAACGGCACGGCAAGCTTCCTTGGAAAGAGCTGTTTCTACCAAGCGTACAACTGGCCAGAAACGGCTTTCCTGTTGGCAGGGCATTGGCAAGTGCCATTAACTCAAACAGAAACATCATTATGGGTGATAAGATGTTATGTTCTGTGTTCTGCGATTCCAACGGCAACATCCTACAGGAAAACGACACTATTATCTTCTCAAAACTTGCTGACACTTATGAGTTCATTGCAGAGAATGGCCCAAGTGATTTCTACACCGGACAGCTTGCTGAGAGCCTTGTGAGGGATATCCAAGCTGCagATGGGATTATAACTCTGGAGGACTTGAGAGATTACAAGCCCTTGCTGGATGAATACCCCCTCTCTGCCACTATGGGTGAATACACAATGGTGACACCAAACGCGCCTGCCAGTGGCCCAGTCCTCACAATGATACTCAACATCCTGAGCGGTTACAACTTCAGTTCAGACAGTGTCTCCtctactgaaaataaaacccTCACTTATCATCGCATAGTAGAGGCGTTCCGGTTTGCGTATGCCAAGAGGAGCTTCTTGGGGGATCCAGAATTTCTCAACATCTCCAGTTTCATCCAGAACATTACCTCAAAGGACTACGCTGACATGATACTCCAGAAGATCACAGATAATACGACTCAGCAAGAGAGTTACTATGAACCCGAGTTCTACCTTCCCGACGATCACGGCACATCACATGTATCTGTGGTGGCAGAAGACGGCAGCGCGGTCGCCGCCACCAGCACCATCAACACATATTTTGGCTCCAAGTTAATGTCAAATTCGACTGGAATTTTACTTAACAACGAGATGGATGACTTCAGTTCTCCATTGATCACCAATAACTTTGGAGTTCCTCCTTCTCCCAACAACTTCATTGTTCCAAATAAAAGGCCCATGTCTTCTATGTGTCCCACCATCCTactagacaaaaacaaaaaagttaaaatggtGGTCGGAGCCTCTGGTGGAACAAAGATCACCACAGCAGCGGCTGAGGTAATCTTGAAAGCACTGTTCTTTGATTATGACCTGAAGAAAGCGATAGTAGACCCGAGAATTCACAATCAGCTCAGTCCAAACACTACACAAGTAGAGCCTGACTTCGACAAGGCCATTTTGGAAGGTCTTGCTGCGAAGAACCACGTAATAGAGGTGTTGAAGTCCATGGGCGCAGTGGTTCAAGCTGTGGTGCGGTACAGTGCTGGCCTCAGCGCTGAGTCAGACCCCCGTAAGGGAGGATATGCAGCTGGGTACTAACATTCGACTCAGCGATCCACGTCTCCGGTCCAGCTGGAGGCAATGGAGATGCTACTCCGAGAACCCCAAGGACACTTTCCCCTCATGCTGCTCTGAAACAACCAAGTGCCTTCTCCGAGATACAGGCGAATCAGCTCTGAACAATCAAAAGCTCTTCAGTGAATGAggaataaaacacattcaaatacaCTTATCTTTATTCAACTGTTTCTTACGATAACTTCCGTTCATCGAAATCTCTACACATCTTGTTACTGAAGGTATTTATTTCCGCTAATAAACACGCTGTGATGGCTGTTA

Function

symbol description
ggt1b Predicted to enable glutathione hydrolase activity and peptidyltransferase activity. Predicted to be involved in several processes, including peptide metabolic process; response to estradiol; and response to tumor necrosis factor. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in gamma-glutamyl transpeptidase deficiency. Orthologous to several human genes including GGT1 (gamma-glutamyltransferase 1).

NR:

description
gamma-glutamyltranspeptidase 1-like

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250855.1 True 2210 mRNA 0.48 13 16081970 16095356

Neighbor

gene id symbol gene type direction distance location
gpat4 gpat4,LOC107746208,LOC107758670,LOC107689060,LOC107558124,LOC107658586,LOC107583403 coding downstream 52830 16021077 ~ 16029140 (-)
rab11fip1b LOC107758672,LOC107689050,LOC107746209,LOC107583401 coding downstream 72442 15994912 ~ 16009528 (-)
brf2 LOC107746211,LOC107658585,LOC107758611,LOC107558130,LOC107689884,LOC107682650 coding downstream 87998 15989593 ~ 15993972 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding downstream 123525 15931955 ~ 15958445 (-)
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding downstream 191480 15872490 ~ 15890490 (-)
LOC122352490 kdm2b,LOC107602054,LOC107689109,LOC107746202,LOC107558119,LOC107658591 coding upstream 51080 16146436 ~ 16169814 (-)
rhof rhof,LOC107689190,LOC107758662,LOC107577248,LOC107658595,LOC107558117,LOC107746201 coding upstream 88498 16183854 ~ 16187960 (-)
car15 car15,LOC107602060,LOC107758609,LOC107689182,LOC107558080 coding upstream 114392 16209748 ~ 16213685 (-)
dgcr2 dgcr2,LOC107689205,LOC107602057,LOC107746195,LOC107558114,LOC107658593,LOC107758577 coding upstream 121670 16217026 ~ 16227175 (-)
ess2 dgcr14,LOC107758656,LOC107746196 coding upstream 131963 16227319 ~ 16232580 (-)
G77820 NA non-coding downstream 94483 15935553 ~ 15987487 (-)
G77821 NA non-coding downstream 150319 15931346 ~ 15931651 (-)
G77831 NA non-coding downstream 153653 15928092 ~ 15928317 (-)
G77830 NA non-coding downstream 154472 15927186 ~ 15927498 (-)
G77827 NA non-coding downstream 160610 15920921 ~ 15921360 (-)
LOC122353141 NA non-coding upstream 3639 16098995 ~ 16101344 (-)
trnag-gcc_65 NA non-coding upstream 23430 16118786 ~ 16118856 (-)
trnag-gcc_66 NA non-coding upstream 23596 16118952 ~ 16119022 (-)
G77936 NA non-coding upstream 83244 16178600 ~ 16179895 (-)
LOC122352611 NA non-coding upstream 94178 16189534 ~ 16193540 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other downstream 24663 16030527 ~ 16057307 (-)
LOC122352931 LOC107758671,LOC107689893 other downstream 60196 16016671 ~ 16021774 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 184738 15892644 ~ 15897232 (-)
G77702 NA other downstream 723738 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 792298 15229969 ~ 15289672 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 77122 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 320552 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 337171 16432527 ~ 16437594 (-)

Expression


Co-expression Network