LOC122353026


Basic Information

Item Value
gene id LOC122353026
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3086211 ~ 3088976 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250858.1
TTATTTGATATCTGTTATACtattaaaagaaatgtgttaataatttaaacatgtaaataatgtactaattattgttactgttattgCTGTACTGTTACAAATATTGTTtgtaaaactgaaagtgaaaataatCAGGGACTATGCTGAAAGCATCCAGGCTGGGCTGCCGGCAGACTGAGGAATAATTCACTGTGCTATaagaagagcaaaaaaaaatagaagtgGATCTTTATCATCGTCGGATCAAATGGCAAGCCAAGAATATGAAGAATCGAGGAAGACATTTGCCTGGGGACAGAAGGAAGCACTGAAGAAACGTCTAGAAGAGTTCTCTGTGAGTCATCCAGATGTAAAGCACATCAGGATCCTGTTAGCTGGACAAACCGGAGCAGGGAAGTCTAGTTTTATTAATTCTGTCAACAACGTCTTCCAAGGACGGATGACAAGTGAAGCACTAGTGGATTCAAATGACTTGTGCTTCACAAAGAGACTTAAGTCACACAGAGTCAGAGGTGCAGGTGGTGATCTGCCATTTGTATTGATTGACACAATGGGTTTAGAACCTTGTGTATTGGAGGGGCCTTATCCAGAAGATATCATCCAAGCCATATACGGACATGTGAAGGAAAACTACAAATTTAACCCAGATGAGCCACTCAGTCACAGGAGTAAAGATTACATCAGTGACCCTTTACTCTCTGAACAGGCTTTTTGCCTGGTTTACATTGTGGATGCACCTACAATCCAATATATAGATGAGCGACTTACGGACAAATTGAAGATCATCCGTCAGAGAATCGGTTCTAAAAGGATCCCTCTAATGATCGTCATGACTAAAGTGGATGAAGCATGTCCACTGGTAAACGCTGACCTAAGGAAGTTATACACCAGCGAGAAGATCAGAAAGATGaagaTCTGTTGCGCCGAGAGGATTGGGGTGCCAATAAGCTCCATCTATCCAGTGAAGAACTACCATGATGAGATTGAAGTAGACGATGATGTTGATGTTCTGATTCTtaatgcatttgagcaaattgtGAACTCTGCTAATGACAGACTAAGGGAAGAAGCTTATGAATAATGTAAATGAACACAGTAATATTGCTCAATGCTCAATGAACGACACCTGGAATGCACATTTATGACAGTTATTAACTACTAAgtataaatgtacaaaactcCCTGTTACATGTAATAGCAAATCATAACTGCCTCTTTGacgcatacacacaaaaacagaatcATTTTCACAGCTATCACAGCTCATTACAACaaagtattacagtttttttacgcttttaaagtttttatattttttttttatatggttttGCTATTAGTCTGTTATGTTAAGTAATGCTATATATCACTGTTATTCCATAGTAATCTAATAATCACATACTTGACcagtcttcttcttcttcttctttagaTTCATTGAATAGCATGTGTGCAAGGCTCCAATACAACTATAAAGCAATTATATAATCACTAATAAATCGTTCAATGAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250858.1 True 1513 mRNA 0.37 7 3086211 3088976

Neighbor

gene id symbol gene type direction distance location
LOC122352383 musk,LOC107653500,LOC107756538,LOC107702603,LOC107723318 coding upstream 260254 2810572 ~ 2825957 (+)
galt galt,LOC107653127,LOC107667272,LOC107573074,LOC105911052,LOC107756536 coding upstream 632601 2363849 ~ 2453610 (+)
hdhd2 hdhd2,LOC107738843,LOC107743237 coding upstream 734545 2347998 ~ 2351666 (+)
ier3ip1 ier3ip1,LOC107738842,LOC107743093,LOC107653125,LOC106633120 coding upstream 738362 2346020 ~ 2347849 (+)
skor2 LOC107738854,LOC107558682,LOC107743073,LOC107653123 coding upstream 740684 2333644 ~ 2345527 (+)
LOC122352595 grin3a,LOC107710005,LOC107750958,LOC107653477,LOC107702562 coding downstream 55897 3144873 ~ 3161270 (+)
LOC122352986 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 coding downstream 182914 3271890 ~ 3308350 (+)
LOC122352557 plppr1,LOC107750956,LOC107653496,LOC107702599,LOC107710008,LOC102776600 coding downstream 324949 3413925 ~ 3455787 (+)
LOC122352579 LOC107702598,LOC107715893,LOC107653494,LOC107732273 coding downstream 407770 3496746 ~ 3568497 (+)
carm1l LOC107702592,LOC107715849,LOC107679043,LOC107573847 coding downstream 538191 3627167 ~ 3640861 (+)
G74392 NA non-coding upstream 304894 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 369454 2716522 ~ 2716757 (+)
G74388 NA non-coding upstream 369919 2715379 ~ 2716292 (+)
G74387 NA non-coding upstream 370860 2715056 ~ 2715351 (+)
LOC122352387 NA non-coding upstream 510129 2520383 ~ 2576082 (+)
LOC122353153 NA non-coding downstream 498387 3587363 ~ 3587894 (+)
G74585 NA non-coding downstream 679225 3768201 ~ 3768652 (+)
G74589 NA non-coding downstream 699781 3788757 ~ 3844512 (+)
G74596 LOC107715844 non-coding downstream 765340 3854316 ~ 3858952 (+)
G74626 NA non-coding downstream 802915 3891891 ~ 3893020 (+)
il11ra LOC107756541,LOC107554229,LOC107750187,LOC107653503 other upstream 305736 2777859 ~ 2780475 (+)
cntfr cntfr,LOC107554853,LOC107738850,LOC107756542,LOC107554231 other upstream 380487 2589096 ~ 2705724 (+)
smad2 smad2,LOC107743055,LOC107653131 other upstream 835314 2231422 ~ 2250897 (+)
G74171 NA other upstream 885744 2194097 ~ 2200467 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other upstream 974517 2111196 ~ 2111694 (+)
LOC122352855 LOC107702575,LOC107715854,LOC107732942,LOC107569381,LOC107653476,LOC100002406 other downstream 480302 3569278 ~ 3574352 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other downstream 499268 3588244 ~ 3617516 (+)
lyrm7 lyrm7,LOC107732862,LOC107715852 other downstream 499442 3588418 ~ 3590111 (+)
si:ch73-234b20.5 si:ch73-234b20.5,LOC107702596,LOC107558257,LOC107653492,LOC107573851,LOC107732123,LOC108440734 other downstream 507630 3596606 ~ 3604216 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other downstream 574936 3663912 ~ 3668006 (+)

Expression


Co-expression Network