LOC122353050


Basic Information

Item Value
gene id LOC122353050
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15716784 ~ 15717845 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250883.1
GGACAGCAAGGAGAGCAGAACAAACTCCTAACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCATGAGACTCAATACTGCTTTCCTGCCATCAACTCTTCATGTATCAAGGGAAAACGCTCCAGACATGAATATAATatcatgtatgtgtttttttcattgctgtcaGCATGGACCGTGTTTCTGAATCTGCTGGTGatcatctccatctctcacttcaAGAAGCTTCACACTCCAACCAACCTgctcattctctctctggctgtggCTGATCTATTTGTTGGACTTATTGTGATGCCTGTAGAGGCCACAAAACTGATTGAGACATGTTGGTACTTTGGAGACACTTACTGTGGACTGTTTATGGCAATTACAGGCTTGCTCCTATCTGCGTCTTtaagtaatttagttttaattgctgttgatCGTTATATGGCTGTGTGTCACCCTTTACTGTACCCACAGAAAATAACCACAACGAAAACTGTAATGAGCATCTGTGTGTTCTGGTCTTGTTGTACGACTTATAACTTTGCCATTGTAATATGTAACGGATATTTTGACCCCTCACACAGAACAGATGTGTGTTATGGCGAGTGTATTGCTATGATTAGTTCTTCTTGGAGATTTACTGATTTGGCATTTTCCTTTCTATTTCCTTCTATCGTGATCATCACAGTGTATTTgagaatattttatgttgtacaATATCAAGTGAAAGTTATTAACTCTCTGATGAAGAGTGGTAAATGTGTAATAGAATGTTCAGTGAGGAGGAAATCTGAGAGTAAAGCTGCTCTGACATTAGGGATCATTGTCACAGTTTATCTGTTTTGCTGGATTCCATACTATATACTGACTCTAACAGAAATTACAGTAAACACTTTCACAACAGTAACATTTCTAACCTGGACTTTGTATATAAACTCAGGTCTGAATCCTCTCATCTATGCCTTATTCTACCGATGgtttaaaatatcagttaaatACATATTGACACTTAAAATATTGGAGCCAGCATCTTCTGTCATGGACATTTTTACAGATTATTCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250883.1 True 1062 mRNA 0.38 1 15716784 15717845

Neighbor

gene id symbol gene type direction distance location
LOC122353072 NA coding downstream 2357 15713381 ~ 15714427 (-)
LOC122352458 NA coding downstream 10504 15705225 ~ 15706280 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding downstream 19106 15695420 ~ 15697678 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding downstream 32491 15683271 ~ 15684293 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding downstream 354508 15347467 ~ 15362276 (-)
LOC122353087 NA coding upstream 3510 15721355 ~ 15722425 (-)
LOC122353079 NA coding upstream 12690 15730535 ~ 15731590 (-)
LOC122352466 LOC107658525,LOC107730956,LOC107558095 coding upstream 50091 15767936 ~ 15768934 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding upstream 56042 15773887 ~ 15774873 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding upstream 78699 15796544 ~ 15797536 (-)
G77715 NA non-coding downstream 68921 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 322232 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 348108 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 369495 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 440780 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 109239 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 113362 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 121668 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 122506 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 185042 15902887 ~ 15912782 (-)
G77702 NA other downstream 358552 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 427112 15229969 ~ 15289672 (-)
G77671 NA other downstream 609032 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1126885 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1231492 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 174799 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 298826 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 312682 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 454633 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 698063 16415908 ~ 16490354 (-)

Expression


Co-expression Network