LOC122353072


Basic Information

Item Value
gene id LOC122353072
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15713381 ~ 15714427 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250904.1
gaacagcAGAACAAACTCCTAACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCATGAGACTCAATACTGCTTTCCTGCCATCAACTCTTCATGTATCAAGGAAAAACGCTCCAGACATGAATACTATatcatgtatgtgtttttttcattactgtCAGCATGgactgtgtttctgaatctgctggtgatcatctccatctctcacttcaAGAAGCTTCACACTCCAACCAACCTgatcattctctctctggctgtggCCGACATGCTTATTGGACTTATTGTGATGCCCGTAGAGGCCACTAGGCTGATTGAGACGTGCTGGTACTTTGGAGACGCTTTCTGTGGACTGTTTGTGATAATCATGGGACTGCTTGGCTCAACATCTCTCAGTAACTtggttttaattgctgttgatCGTTATATGGCTGTGTGTCACCCTTTACTTTACCCGCAGAAAATAACAATGGCTAAAACTTTACTAAGCATCTGTCTCTGTTGGTTTTTCTCGTCAGTTTACAACACTGCCATTGGAATCAGCAACAAgtattttgacatttcaaaCAGAACAGATGAGTGTTATGGTCAATGTAACTTCACAATTAGTTTTACTTGCAGGGTCATTGATGTGATATATTCTTTTCTGTTGCCTTGCAGTGTGATGATCACTGCATATTTGAGAATATTCTATGTGGTTAATCATCAAGTGAAAGTTATAAACTCTCTGATGAAGAGTGGTAAATGTGTAACAGAAGGATCTATGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACATTAGGGATCATTGTGACAGTTTATCTGCTTTGCTATATTCCCTTCTATATATTGTCTCTAACAGGTACTGCTGTTATCTCTTCTGCCGCAATGACATTTCTAATATGGACTTTGTACATTAACTCGGGTCTAAATCCTCTTAtctatgctttattttacagctggtttaaaatatcagttaaacACATCTTAAGTCTTAAAATACTAGAGCCAGCATCCTCTCTCATGGATATTTTTAGAGGTtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250904.1 True 1047 mRNA 0.39 1 15713381 15714427

Neighbor

gene id symbol gene type direction distance location
LOC122352458 NA coding downstream 7101 15705225 ~ 15706280 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding downstream 15703 15695420 ~ 15697678 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding downstream 29088 15683271 ~ 15684293 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding downstream 351105 15347467 ~ 15362276 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding downstream 371416 15316648 ~ 15341965 (-)
LOC122353050 NA coding upstream 2357 15716784 ~ 15717845 (-)
LOC122353087 NA coding upstream 6928 15721355 ~ 15722425 (-)
LOC122353079 NA coding upstream 16108 15730535 ~ 15731590 (-)
LOC122352466 LOC107658525,LOC107730956,LOC107558095 coding upstream 53509 15767936 ~ 15768934 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding upstream 59460 15773887 ~ 15774873 (-)
G77715 NA non-coding downstream 65518 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 318829 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 344705 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 366092 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 437377 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 112657 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 116780 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 125086 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 125924 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 188460 15902887 ~ 15912782 (-)
G77702 NA other downstream 355149 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 423709 15229969 ~ 15289672 (-)
G77671 NA other downstream 605629 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1123482 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1228089 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 178217 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 302244 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 316100 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 458051 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 701481 16415908 ~ 16490354 (-)

Expression


Co-expression Network