LOC122353079



Basic Information


Item Value
gene id LOC122353079
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15730535 ~ 15731590 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043250910.1
taaataaaaggacAGTAAGGAGAGCAGATCAAACTCCTAACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCATGAGACTCAATACTGCTTTCCTGGCATCAACTCTTCATGTATCAAGGGAAAACGCTCCAGACATGAATACTATatcatgtatgtgtttttttcattactctCAGCATGGACTTTGTTTATGAATCTGTTGGTGatcatctccatctctcacttcaAGAAGCTTCACACTCCAACCAACCTgatcattctctctctggctgtggCCGACATGCTTATTGGACTTATTGTGATGCCTGTAGATGCTATTAAACTAATTGAATCATGTTGGTACTTTGGAGACACATTGTGTGATCTGTTTATGATAATCATGGGACTGCTCCTCTCAACATCTCttagtaatttagttttaattgctgttgatCGTTATATGGCTGTGTGTCACCCTTTACTTTATCCACAGAAAATAACCATGACTAAAACTTTAATAAGCATCTGTCTCTGCTGGTTTTTCTGTTTAACTTCCAATATTGCCTTTCTAATTAGTAGCAGATATTTTGACACTTCACAAACAACAGACATGTGTTATGGAAAGTGCTATTTAATACTAAGTTTTTCATGGACATTCACTGACATGTTTTTATCCTTTCTGTTCCCTTGTACCCTGATTATAACTTTATATTTGAGGATATTTTATGTTGCCCATCAGCAGGTGAAAGTTATAAACTCTCTGTTGAAGAGTGGTAAAAGTGAAATGGAAGGATCAATAAGGAGGAAATCTGAGAGTAAAGCTGCTCTGACATTAGGAATCATTGTGACAGTTTATCTACTTTGCTATATTCCCTATTATATATTCTCTGTAGCAGGTATGACTGTAATGACATTTCTTGTATGGACTTTGTATATTAACTCAGGTCTGAATCctcttatttattgtttattttaccactggtttaaaatatcaattaaattcATCATaactcttaaaatatttaaaacagcatcctctcttttagacatttttgcTGAATATTCATAA

Function


GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043250910.1 True 1056 mRNA 0.35 1 15730535 15731590

Neighbor


gene id symbol gene type direction distance location
LOC122353087 NA coding downstream 8110 15721355 ~ 15722425 (-)
LOC122353050 NA coding downstream 12690 15716784 ~ 15717845 (-)
LOC122353072 NA coding downstream 16108 15713381 ~ 15714427 (-)
LOC122352458 NA coding downstream 24255 15705225 ~ 15706280 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding downstream 32857 15695420 ~ 15697678 (-)
LOC122352466 LOC107658525,LOC107730956,LOC107558095 coding upstream 36346 15767936 ~ 15768934 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding upstream 42297 15773887 ~ 15774873 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding upstream 64954 15796544 ~ 15797536 (-)
LOC122353177 LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107558078,LOC107658550,LOC103911781 coding upstream 68200 15799790 ~ 15800764 (-)
LOC122353102 LOC107558094,LOC107658523,LOC107730955,LOC107558078,LOC107558105,LOC107658550,LOC103911781 coding upstream 73517 15805107 ~ 15809057 (-)
G77715 NA non-coding downstream 82672 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 335983 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 361859 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 383246 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 454531 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 95494 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 99617 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 107923 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 108761 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 171297 15902887 ~ 15912782 (-)
G77702 NA other downstream 372303 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 440863 15229969 ~ 15289672 (-)
G77671 NA other downstream 622783 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1140636 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1245243 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 161054 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 285081 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 298937 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 440888 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 684318 16415908 ~ 16490354 (-)

Expression



Co-expression Network