st8sia4 (st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405)


Basic Information

Item Value
gene id st8sia4
gene name st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3883259 ~ 3891247 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250921.1
agagagagttgtgtTTGAGATGGGTAATGTGCGTTACGAGAGAGCACGCTTTCTTCTCATCTTCAGGCACTTTCGCAAGATTCATGTGTCAAATGCGGCTTATACGGAAACGATGGACTATCTGCATCATAAGCATCCTGCTGATATTCTACAAAACGACAGATATAGGCAGAAATGAAGCGCGCCAGAAGACTGGACTGACAGGGAGGTCTGAGCCCAGTTCCACCAGACTGATGGCTAATGGCTCCGAGAAGCTGTTTGGCTTTAGTTTAAGCGATCTGAGTGATATGGGAGTGGGATGGAAGATAAATGCCACCCTTGTGACCATCATAAGGAAAGACGTGCTTCGCTTCTTGGATGCGGAGAGGGACGTGTCTGTTATCAAGAGCAATTTCAAACCAGGCGATACCGTCCACTACGTTCTAGACCGACGCAGAACGTTCAATGTTTCTCAGACTCTACACACTTTACTTCCCGAAGTCTCTCCACTAAAGAACAAGACCTTCAAGACCTGTGCTGTGGTGGGGAACTCAGGCGTTCTCCTGAAGAGTGGATGTGGGAGGGAGATAGACAGCCATAGTTTTGTTATACGATGTAACCTCGCTCCTCTGGAAGATTTTGCAGACGACGTGGGTTTGAGGTCAGACTTCACCACTATGAACCCCTCTGTGATCCCTCGGGTGTATGGGGGTCTACAGGACGAACGACAGCAGGAGCAGTTCATCCAACGTTTACAGCAGCTGAACAACAGTGTGCTCTGGATCCCTGCCTTCATGGTGAAGGGTGGAGAGAGGCATGTGGAAACTGTGAACCAGCTCATTGTTAAACACAAAGTCAAAGTGCGCATGGCATACCCTTCGCTCCGCCTGATCCATGCCGTAAGAGGGTACTGGCTCACAAATAAGATCAATATCAAACGACCCTCTACTGGATTATTGATGTACACGATGGCTACGCGCTTCTGCGACGAAATCTATCTGTATGGATTCTGGCCTTTTCCCAAAGACGGCAACGGAAACCTTGTTAAATATCATTACTATGATGGACTTAGATATCGCTATTTTTCCAACGCGGGTCCTCACCGGATGCCGCTGGAGTTCAAGACGCTGAAGAAACTGCACAGCAAGGGTGCACTCAAACTGACCACATCTAAATGCGCATACCCTTGAGCTCACGAACCGACGCTCAGACTGAGAAATCAAGCTACAATTTCAAGCTTTGGAGAACGAGTGTGCCTTCAACTGCAACTGCTCATCTTGCGATACGTCTGATTTTGTTTACTGTAGAGAAAGTGCAATGCTTTACGCACTGAACAAACAACTGTGATTTCCAAATGACAAACGATACAGTCGTGTTTAGTGCGTTGATGTTACGGTCTTGCTAAGCGATCTTGTCTGAAAATGTCTTGCACAAAAGTTGCCAAAGatactttatttttagtatatggAACCATGGTTATTTTTTGATACACACAATTTAGAGACTCCCATACAGCTATACAAGCAGCtccaaaaaaaagtcaaatcgTGTGTAAAGTAAAGATTTTATGAGTTTAAGTCATAGAATATGGCAACTTGTTGAGTTTGATTTCACCCGACAGcatccacttttttttaatggcctGGAGATTTAAATAATAGGTGTAAATGATTTTCTAtcaatgtgaaataaaaaaacatctggtTTGTTGTCAATGAACCATATAGTTCCCAGTGGCGCTGTTAAGTTAGGAAGAATCCAAGGGCCCGACAATGGAGGGGGGCCCCCCGAAGGAGAAATGCGGGACATGATCTCGATTAATTACTGCAGGGGAAAAACTactgagagggaaaaaaagggaaGCACTGGTATCAGTCTAAATTGGATGAATGCTTAACTTGTATATTGTCGAAAAGTAATTTAGACCAATGTGTCTTAATCAAATGTACTGCTGTATGTCAGATTGTATTGGCATGCCGGAAACTGATGACTTGAATATTATAACCCCTCATATTATTTATGTGGCATTACATTGTGTGTCTTACTGGTGGCTTACTGTAAGTATGGACAAACAGTAAAACGTTCTGAGCGTATTATCGATGCAGAACTGTTTGTATCTTcagtaaatgcataatatatgtacgTTAGGCCTTTTTGAATGAAGACATGCAATGCCTTAGAGTATTGATTTACAATTCTGTTTTTCTACTACAGtgcattcttttatttatattgtaatgtattttgtatttcaaacaaattaaatgcgtttttaagca

Function

symbol description
st8sia4 Enables sialyltransferase activity. Predicted to be involved in N-glycan processing; oligosaccharide metabolic process; and protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; liver; nervous system; pleuroperitoneal region; and unfertilized egg. Orthologous to human ST8SIA4 (ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4).

NR:

description
CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0030173 integral component of Golgi membrane cellular_component
GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity molecular_function

KEGG:

id description
K06614 SIAT8D; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8D)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250921.1 True 2258 mRNA 0.43 5 3883259 3891247

Neighbor

gene id symbol gene type direction distance location
il6st LOC107715880 coding upstream 48889 3821337 ~ 3834370 (+)
ankrd55 ankrd55,LOC107702571,LOC107670032,LOC107737049 coding upstream 64774 3808014 ~ 3818485 (+)
auh auh,LOC107720385 coding upstream 93079 3773510 ~ 3790180 (+)
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding upstream 110549 3768754 ~ 3772710 (+)
ror2 ror2,LOC107702585,LOC107683466 coding upstream 115586 3709666 ~ 3767673 (+)
syk syk,LOC107715877,LOC107736968 coding downstream 21018 3912265 ~ 3935837 (+)
map3k1 map3k1,LOC107558252,LOC107670047,LOC107715839 coding downstream 68794 3960041 ~ 3999938 (+)
hmgcs1 hmgcs1,LOC107715876,LOC107737058 coding downstream 110552 4001799 ~ 4009370 (+)
tpm2 tpm2,LOC107670037,LOC107737084,LOC108276716,LOC108427282,LOC103044350,LOC108242564,LOC107572193,LOC107715874,LOC100710292,LOC106571564 coding downstream 190336 4081583 ~ 4096903 (+)
zgc:114200 zgc:114200,aph1a,LOC107572194,LOC107737132,LOC107670051,LOC107572192,LOC108427283 coding downstream 206799 4098046 ~ 4104787 (+)
G74596 LOC107715844 non-coding upstream 24307 3854316 ~ 3858952 (+)
G74589 NA non-coding upstream 38747 3788757 ~ 3844512 (+)
G74585 NA non-coding upstream 114607 3768201 ~ 3768652 (+)
LOC122353153 NA non-coding upstream 295365 3587363 ~ 3587894 (+)
G74392 NA non-coding upstream 1101942 2780642 ~ 2781317 (+)
G74626 NA non-coding downstream 644 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 229617 4120864 ~ 4122658 (+)
G74680 NA non-coding downstream 260211 4151458 ~ 4153279 (+)
G74681 zgc:194281,cunh5orf30,LOC107665462,LOC107740794,LOC107670048,LOC107564120,LOC107715868 non-coding downstream 263800 4155047 ~ 4160317 (+)
G74659 NA non-coding downstream 273711 4164958 ~ 4176118 (+)
cdc42se2 cdc42se2 other upstream 188663 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 215253 3663912 ~ 3668006 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other upstream 265743 3588244 ~ 3617516 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other downstream 121787 4013034 ~ 4120447 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other downstream 590020 4481267 ~ 4529002 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 1225619 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 1347032 5238279 ~ 5250137 (+)
G74965 NA other downstream 1365591 5256838 ~ 5258823 (+)

Expression


Co-expression Network