plpp1a (plpp1,plpp1a,LOC106561845,LOC107686491)


Basic Information

Item Value
gene id plpp1a
gene name plpp1,plpp1a,LOC106561845,LOC107686491
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 564059 ~ 577223 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250972.1
ACAGGAGCTCGGTGCGCAGCCCGAAGAAGCTCCAGTCTATTTAACCGGAATCCTGAAACGTCGCGCGCCGGCTCGTCATCGCTTATTCTTAACCTCACGCGCTGAGATGGTGAGCTTATCTCAGGAAGTCCTCGCAGACGGCTCGCTGTGTCTCGTCTCCAGCTGATTATTAGTCGCCTCGCGCGGTCCATGTTAATAAGAGTGCTCGCGCTCGCGTCGGTGCGCGTCTCCGCAGACCACTAGAGTCCGTGTGCGTTTCCTCCGAGGACGCCTTAAAAGAAGCCTTTATCTCCACGAGCGACCCGCGGGAGGACACTGACACCATGTTTGAAACCAGAGGAGTCCCCTTTATATTGCTCGACATCGCGTGCCTAATACTCGCTGGCCTCCCGCTTGCAGCGTTTAACCTGGGTAAAATCAAACCGTATCAGCGGGGCTTTTTCTGTAATGACGAGAGCATCAGCTATCCCTTCCACAGCAGCACAGTCACCTCCACTGTGCTCTACACACTGGGCTTCACCCTCCCCACGTGTAGTATGATCATAGGGGAGTGCCTTTCAGTCTATCTAAACCGCGTCAAATCAAAGTCTTTCTGCAACAGTTATGTGGCCTGTATCTATAAGGCCATTGGCACCTTCGTGTTTGGTGCCGCTATGAGCCAATCACTTACTGACATTGCCAAGTATTCCATCGGCCGGCTGCGGCCACACTTTCTGAACGTGTGCAAACCGGACTGGACGCAGATCAACTGCACAGGAGGGGCTTACATTGAGGACTTCGTCTGCCTTGGGGATTCAACCAAGGTCAACGAGGGAAGactCTCGTTTTACTCGGGACACTCCTCATTCTCCATGTACTGCATGCTGTTCCTGGCACTTTATCTTCAAGCTAGAATGCAAGCCGAATGGGCACGGCTCCTTCGCCCCACGCTCCAGTTCTTCCTGATCGCCGCCTCCGTCTATACGGGACTGTCCCGAGTGTCCGACTACAAACACCACTGGAGCGATGTCCTCGCAGGACTCGTACAAGGAGCCATCGTGGCTTTACTAGTGGTTTTCTTCGTCTCTGACTTCTTCAAAAAGAGAGTGGAGCCACAGAAGGAGGCCGAGATCCCACACACCACCTTACAGGAGACACCTACGAATGGAAATCATTATGAAAACCCAAACTAAGCTACGATGAGCCTCAGTGGACGGGAAGGGGCAGACCACTAGTGTGGAAACCTGTGAATGTAACCTTGCTTTCTATGTTCTCCGGACGTCTCTTCTGAGGAGGTCTCTCTGGACGCTGTCCCACGTTGCCTTGGCTGGACTGCTTCTGCTGCTACCACAGCTTCCTGTGTATCTCCAAAAACTAATATAAGTGTACCTCTATTAAGCCACgaaagaaaaaacttttttatctgtatgaagaaaaaaaaaagaatcactacacagacttgttttttttttttttttaaaaatggttaaaattaTGTACAATGTGTTGCGCTTTTACGATGGAAACAAATTATGCTCGttgacaaacataaataaaacaattatgtttCATGTA
>XM_043250973.1
TGACAGGAGCTCGGTGCGCAGCCCGAAGAAGCTCCAGTCTATTTAACCGGAATCCTGAAACGTCGCGCGCCGGCTCGTCATCGCTTATTCTTAACCTCACGCGCTGAGATGGTGAGCTTATCTCAGGAAGTCCTCGCAGACGGCTCGCTGTGTCTCGTCTCCAGCTGATTATTAGTCGCCTCGCGCGGTCCATGTTAATAAGAGTGCTCGCGCTCGCGTCGGTGCGCGTCTCCGCAGACCACTAGAGTCCGTGTGCGTTTCCTCCGAGGACGCCTTAAAAGAAGCCTTTATCTCCACGAGCGACCCGCGGGAGGACACTGACACCATGTTTGAAACCAGAGGAGTCCCCTTTATATTGCTCGACATCGCGTGCCTAATACTCGTTGGAGTCCCATTTGCAATACTCAcaatacaacacaaaacattcaaacgAGGATTTTTCTGTAACGATGACTCTATCAACTACCCATATAAAGAAGACACCATTTCCTATCAGTTATTAGGAGGAGTAATGATTCCTATCACTGTGCTTACTATGATCATAGGGGAGTGCCTTTCAGTCTATCTAAACCGCGTCAAATCAAAGTCTTTCTGCAACAGTTATGTGGCCTGTATCTATAAGGCCATTGGCACCTTCGTGTTTGGTGCCGCTATGAGCCAATCACTTACTGACATTGCCAAGTATTCCATCGGCCGGCTGCGGCCACACTTTCTGAACGTGTGCAAACCGGACTGGACGCAGATCAACTGCACAGGAGGGGCTTACATTGAGGACTTCGTCTGCCTTGGGGATTCAACCAAGGTCAACGAGGGAAGactCTCGTTTTACTCGGGACACTCCTCATTCTCCATGTACTGCATGCTGTTCCTGGCACTTTATCTTCAAGCTAGAATGCAAGCCGAATGGGCACGGCTCCTTCGCCCCACGCTCCAGTTCTTCCTGATCGCCGCCTCCGTCTATACGGGACTGTCCCGAGTGTCCGACTACAAACACCACTGGAGCGATGTCCTCGCAGGACTCGTACAAGGAGCCATCGTGGCTTTACTAGTGGTTTTCTTCGTCTCTGACTTCTTCAAAAAGAGAGTGGAGCCACAGAAGGAGGCCGAGATCCCACACACCACCTTACAGGAGACACCTACGAATGGAAATCATTATGAAAACCCAAACTAAGCTACGATGAGCCTCAGTGGACGGGAAGGGGCAGACCACTAGTGTGGAAACCTGTGAATGTAACCTTGCTTTCTATGTTCTCCGGACGTCTCTTCTGAGGAGGTCTCTCTGGACGCTGTCCCACGTTGCCTTGGCTGGACTGCTTCTGCTGCTACCACAGCTTCCTGTGTATCTCCAAAAACTAATATAAGTGTACCTCTATTAAGCCACgaaagaaaaaacttttttatctgtatgaagaaaaaaaaaagaatcactacacagacttgttttttttttttttttaaaaatggttaaaattaTGTACAATGTGTTGCGCTTTTACGATGGAAACAAATTATGCTCGttgacaaacataaataaaacaattatgtttCATGTA
>XM_043250975.1
GTCTTCCCTCGCCGCTCTTTTGAAGGATATTCATCTTGAGAGTTTAATGGGCTTCGTTTCGATTGAGCAAACAGACAAATAGACAGCGAAGAGCAGCTGTTTCAACGAGACTCCTGACCGCCGAACAGGTGCGAAATGCAGTTTCAGTAGAGATTGAAAGCAGCTGTTCAAGTCACTCCATCTCACATTGTGTCTGAGGCTGGCCGCACACGAGACCATAATTAAAGGATAGTTCTCCCAAAACTGAAGATgagatgtttatctgcttatcCTCAGGGCGTCCACGATGAGTGACTTCGTTTCTTCAGTAGACTTTTAACTCAAAGTCTGTCAGTCACACAATGGCAGTAGCTTAAAGCAGCCATATTGGTTTTTTTCCACTGTACAGTGAAAGGACAGTGTTGATCGTCctctatttgtttttcttctccgGTCATGTTTGACTTCTCATGTGTGAGCGAGCTCTCGTTTCTCTGTGAAATCATCACGTGTGTGTTCTCGGGGTCTGCTCCAACCGTCTAGCGCGCCAGTTTTTCCAAATCGATCGAACTGTTAAAAATAcggttttaaaatcttttaagaATTGAAAATGGTCTAGTGTCTGGCCAGCCCTACACTTCAGAAACAGGAAGAGATAGAGagagtccacccaaaaatgaaagctcTTCTCTCgtcctcatgttgttccaaacctataagacTTAATTTATCTTTGAAAAATTAACCAAAAgagatttttctgtttgtgtccTTCCGTTGAAAGTTCACGTAAGCAAAACTCGCCATAAAAACGAATCCATGTGAATCGAGTGGTTAAATATCTGGTCAATATTGGTTATCGCATACATCCTAATTTAAACTTAAAGTGTCCCGTTGTTGAATTAAACGCTACAAGTCACATTAAagcttttacatatttttttattctgcttcTGTATAAAAAATGAGGCCCAATGTTACCAGaaataagattaaatatttCTTGGGATCTCGTAAAAGCTGTACAATACATACAGTTAAAAACACTAGACGACAGGCCAGAAACCAAAGATCAAGCTGAaacttaattaattacaaaataaagaacaaacaaggacaaaaagatttttcttgaaataaaaaCGATAGGatagttcataaaaaaaaaaaaaaatagaaaccatCTTTGAACTGAAGGTGTGGCAAAAGACGCGTCCACTGAAGACTGGTGTATATGGTGTCTTACTTAAAGCTCTGTTTGGTGTAGAATCGTTTCAGGAGCTCGTTTGCTCATGCTTTTGTTCCTTTGTGTGGGGATACTCTGGGCATGTTGCTTTTCATTAACTTCTTAGCCAAGGATGTCCACCAAGTACAAGAAATGGCCTTAAAGTAGCCGTTTTAGATTAGCTCAGATTTGAGGTATTTTGGGCTCCTTCGATCTGCTTTGAACTGCAAATTGGGCAAAGTTTGTGGCTTTTATTAAGAGAGGGTTCTTGGGCTTACCAACCAAACCACAGAAACTTCCTGAATATGTTGAGGAAGGGTCACCGTTTGGTCACATCTCAAGTGCTGTGCACTTCACAGTTAATTACGTAAACATTTGTAACAAAACTGTTTCAAAACAGCATATTCAACCTGATGGAAGACGGATATTGCGATCCGTCTGGAATGTGATAGGAGTGGATAGCTGATATCTTCTGGAGCACAGATGGCATACTTTTTCTTCTAAAACATCTCAGAGTTTCAGCCCTCCTTTCCACAAATATCCCAGACTTCTATCTCATAACCCACAGGCTTAAGAAAACCTCAAACTTCCCATATTGCAAGATTTGGCTTTGACCTCTATGTAAGCAGCGCTTCACTTCCCGCCGAGGCAGCATGCGAGTAATGATCTAAAGGTTAACGTTACACCGGTGAAATCCCATACGTTCAGCCGGCACATCACAGACCATGACAATGCAGCTCTCatcacagacagagagaagataCGCCGTAATTTTAGGAGGCTTCGGTTGGTGACCTGCACTGATCCACATGACTGATATCAGCTCTTAGCAGCTTGAGCGGTTCATGGACTTCACACAAACAGCAGGCCACATTCAATGCATGTTGGTTGGAGTCCCATTTGCAATACTCAcaatacaacacaaaacattcaaacgAGGATTTTTCTGTAACGATGACTCTATCAACTACCCATATAAAGAAGACACCATTTCCTATCAGTTATTAGGAGGAGTAATGATTCCTATCACTGTGCTTACTATGATCATAGGGGAGTGCCTTTCAGTCTATCTAAACCGCGTCAAATCAAAGTCTTTCTGCAACAGTTATGTGGCCTGTATCTATAAGGCCATTGGCACCTTCGTGTTTGGTGCCGCTATGAGCCAATCACTTACTGACATTGCCAAGTATTCCATCGGCCGGCTGCGGCCACACTTTCTGAACGTGTGCAAACCGGACTGGACGCAGATCAACTGCACAGGAGGGGCTTACATTGAGGACTTCGTCTGCCTTGGGGATTCAACCAAGGTCAACGAGGGAAGactCTCGTTTTACTCGGGACACTCCTCATTCTCCATGTACTGCATGCTGTTCCTGGCACTTTATCTTCAAGCTAGAATGCAAGCCGAATGGGCACGGCTCCTTCGCCCCACGCTCCAGTTCTTCCTGATCGCCGCCTCCGTCTATACGGGACTGTCCCGAGTGTCCGACTACAAACACCACTGGAGCGATGTCCTCGCAGGACTCGTACAAGGAGCCATCGTGGCTTTACTAGTGGTTTTCTTCGTCTCTGACTTCTTCAAAAAGAGAGTGGAGCCACAGAAGGAGGCCGAGATCCCACACACCACCTTACAGGAGACACCTACGAATGGAAATCATTATGAAAACCCAAACTAAGCTACGATGAGCCTCAGTGGACGGGAAGGGGCAGACCACTAGTGTGGAAACCTGTGAATGTAACCTTGCTTTCTATGTTCTCCGGACGTCTCTTCTGAGGAGGTCTCTCTGGACGCTGTCCCACGTTGCCTTGGCTGGACTGCTTCTGCTGCTACCACAGCTTCCTGTGTATCTCCAAAAACTAATATAAGTGTACCTCTATTAAGCCACgaaagaaaaaacttttttatctgtatgaagaaaaaaaaaagaatcactacacagacttgttttttttttttttttaaaaatggttaaaattaTGTACAATGTGTTGCGCTTTTACGATGGAAACAAATTATGCTCGttgacaaacataaataaaacaattatgtttCATGTA
>XM_043250976.1
AGCGTTTAACCTGGGTAAAATCAAACCGTATCAGCGGGGCTTTTTCTGTAATGACGAGAGCATCAGCTATCCCTTCCACAGCAGCACAGTCACCTCCACTGTGCTCTACACACTGGGCTTCACCCTCCCCACGTGTAGTTTGGAGTCCCATTTGCAATACTCAcaatacaacacaaaacattcaaacgAGGATTTTTCTGTAACGATGACTCTATCAACTACCCATATAAAGAAGACACCATTTCCTATCAGTTATTAGGAGGAGTAATGATTCCTATCACTGTGCTTACTATGATCATAGGGGAGTGCCTTTCAGTCTATCTAAACCGCGTCAAATCAAAGTCTTTCTGCAACAGTTATGTGGCCTGTATCTATAAGGCCATTGGCACCTTCGTGTTTGGTGCCGCTATGAGCCAATCACTTACTGACATTGCCAAGTATTCCATCGGCCGGCTGCGGCCACACTTTCTGAACGTGTGCAAACCGGACTGGACGCAGATCAACTGCACAGGAGGGGCTTACATTGAGGACTTCGTCTGCCTTGGGGATTCAACCAAGGTCAACGAGGGAAGactCTCGTTTTACTCGGGACACTCCTCATTCTCCATGTACTGCATGCTGTTCCTGGCACTTTATCTTCAAGCTAGAATGCAAGCCGAATGGGCACGGCTCCTTCGCCCCACGCTCCAGTTCTTCCTGATCGCCGCCTCCGTCTATACGGGACTGTCCCGAGTGTCCGACTACAAACACCACTGGAGCGATGTCCTCGCAGGACTCGTACAAGGAGCCATCGTGGCTTTACTAGTGGTTTTCTTCGTCTCTGACTTCTTCAAAAAGAGAGTGGAGCCACAGAAGGAGGCCGAGATCCCACACACCACCTTACAGGAGACACCTACGAATGGAAATCATTATGAAAACCCAAACTAAGCTACGATGAGCCTCAGTGGACGGGAAGGGGCAGACCACTAGTGTGGAAACCTGTGAATGTAACCTTGCTTTCTATGTTCTCCGGACGTCTCTTCTGAGGAGGTCTCTCTGGACGCTGTCCCACGTTGCCTTGGCTGGACTGCTTCTGCTGCTACCACAGCTTCCTGTGTATCTCCAAAAACTAATATAAGTGTACCTCTATTAAGCCACgaaagaaaaaacttttttatctgtatgaagaaaaaaaaaagaatcactacacagacttgttttttttttttttttaaaaatggttaaaattaTGTACAATGTGTTGCGCTTTTACGATGGAAACAAATTATGCTCGttgacaaacataaataaaacaattatgtttCATGTA

Function

symbol description
plpp1a Predicted to enable diacylglycerol diphosphate phosphatase activity and phosphatidate phosphatase activity. Predicted to act upstream of or within phospholipid metabolic process. Predicted to be located in apical plasma membrane and caveola. Predicted to be integral component of membrane. Is expressed in mesoderm; notochord; solid lens vesicle; somite; and vasculature. Orthologous to human PLPP1 (phospholipid phosphatase 1).
plpp1 Enables ceramide-1-phosphate phosphatase activity; phosphatidate phosphatase activity; and sphingosine-1-phosphate phosphatase activity. Involved in several processes, including phospholipid dephosphorylation; phospholipid metabolic process; and sphingolipid metabolic process. Located in apical plasma membrane and membrane raft. Is integral component of plasma membrane.

NR:

description
phospholipid phosphatase 1 isoform X2

GO: NA

KEGG:

id description
K01080 PLPP1_2_3; phosphatidate phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250972.1 False 1554 mRNA 0.50 6 564059 577221
XM_043250973.1 False 1553 mRNA 0.48 6 564059 577223
XM_043250975.1 True 3262 mRNA 0.42 6 564059 574342
XM_043250976.1 False 1309 mRNA 0.46 6 564059 574508

Neighbor

gene id symbol gene type direction distance location
dhx29 dhx29,LOC107744100,LOC107686439,LOC107713347,LOC107562543 coding downstream 28100 521051 ~ 535959 (-)
LOC122352790 LOC107686441,LOC107744170 coding downstream 43119 515783 ~ 520940 (-)
apbb1 apbb1,LOC107750985,LOC107573909,LOC107673752 coding downstream 131417 421501 ~ 432642 (-)
phax phax coding downstream 152734 407109 ~ 411325 (-)
lmnb1 lmnb1,LOC107673755,LOC107705849 coding downstream 157626 399164 ~ 406433 (-)
csgalnact1a csgalnact1,csgalnact1a,LOC107713273,LOC107686490,LOC107685172,LOC107562546 coding upstream 2080 579303 ~ 611263 (-)
tctn1 LOC107686437 coding upstream 39807 617030 ~ 622149 (-)
golph3b LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107562594 coding upstream 108688 685911 ~ 690128 (-)
LOC122352658 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090 coding upstream 213049 790272 ~ 792344 (-)
LOC122352659 mocs2,LOC107713337,LOC107744090 coding upstream 215100 792323 ~ 793795 (-)
G73619 NA non-coding downstream 13771 549195 ~ 550288 (-)
G73613 NA non-coding downstream 39189 524290 ~ 524870 (-)
G73570 NA non-coding downstream 57941 504440 ~ 506118 (-)
G73550 NA non-coding downstream 227666 335758 ~ 336393 (-)
G73518 NA non-coding downstream 234158 329277 ~ 329901 (-)
G73623 NA non-coding upstream 837 578060 ~ 579146 (-)
G73624 LOC103390470 non-coding upstream 50555 627778 ~ 635728 (-)
G73643 NA non-coding upstream 91112 668335 ~ 668724 (-)
G73684 NA non-coding upstream 165505 742728 ~ 743650 (-)
G73661 NA non-coding upstream 186660 763883 ~ 765652 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other downstream 167439 359804 ~ 396620 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 472738 40690 ~ 91321 (-)
G73662 NA other upstream 116225 693448 ~ 766346 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other upstream 212200 789423 ~ 793724 (-)
si:dkeyp-41f9.4 NA other upstream 307933 885156 ~ 888012 (-)
G74058 NA other upstream 868100 1445323 ~ 1448886 (-)
G74031 NA other upstream 889528 1466751 ~ 1473878 (-)

Expression


Co-expression Network