LOC122353112 (LOC107726979,LOC107669787,LOC568883,LOC107568003)


Basic Information

Item Value
gene id LOC122353112
gene name LOC107726979,LOC107669787,LOC568883,LOC107568003
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 227167 ~ 237306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250977.1
ATCTACCTGTCACTCAAAACATGTTATATTTAGATGTTAAAACACGTTATTGGTCAGATTGAGGAAAGCAGACAGACTGAGTTTAGTTTGAAGAGTGTGTttagagagaggagaggagagacgGGTCAAACCCGGCCGAAGCGGAGCATGTTACCAGAGGTTTGTTTCAGAATCTCTAACTCTCTGACAGTTTGAGTCAGTGTTCAAACCCTTATACAAAGTACCCACATTTGTTCTATTCCAGAGCCCTGGGAGAACGTTACGGCCCTTGTGACGTCAAACACGAGCAGTGACTGCCAGAGAAGACAGAAACAGCAGAAATACACTTTAAACAAGCTTCTCTGAAACTAAACAGTGTCTGAGTGTCCTGTTACAGAACCAgagatattttatttctaacCCAGTGTACAGTATGGACATTAGAAAGCTTAAGATTAGTACTAGAGTACGTCTGAGCCTGATACAACTGAAAGTATTTTGCAGAATTTCATTCATCTAATATAGAAGAGACAGCATGCGTCTCACTGTGACTGGACTCATATGTTTCTAAtctataatattttgttgcattttataattacGTCTAAGGTGTTACAAGTTAAGTTGGGACACCATGATTTTTAAACTGGAGAAGTTGGATGTTTTGGGAAAAGTAACTTCTTTAAATGATCGGTTTAACACACAAGACTTGTTAACAGGGTTAGAGTAACGACTTCAGTGAGGAGATGTTTTGTTTCCAGATAAAGTGATATTTTCTGACAGGTTTTTCTGACACTGAAGCATCTCTCAGAGGTCACTGAGATCGTTCTCTTGAAGTTTAGCGCCATCTTGTGGATGTCTTCATTACCTCTGCACTCAGAGTAAAATACTGTACTTAGTGTCAATTAACCCAGAAgccagttgttgtttttgatattcatttatatttataaatgtcatcACCAAGGTACTAAAAATCTGATTCCTAAAAGACAACCAAATGTTTGCTGTTGTAAGAAGcatctgttttctctctcaatGCTTTAAActctcatttatttctgtgatgataAATCtgaatcttcagtgtcacgtgatccttcggaaatcattctaatgttgatttgctgctaaaaattattatttttttgctacaAAACAACTGCTATTCAAAGGTCTGTACTaagtaaaataacaaacacGGTAAAGACAACTTTAATGgtacaaaatatttgaataaatgctattcttctgaacttttgatacatttgtgaatcaaaaaaaataaataaataaatgcgcaATTGTTTTTAACTCTTAAATTGtgaagtaaagtaaagtaattgTAAAGTGTAAcctatataataaatgtgttaaagtgtTACTAAGTTGGCAAATCATTAACAGTGCACCTATGGGCAATACAAAGGTTATTGTCTGTTTACTGTCATAATTTTATAATCGTGTAAGATAAACTCATGTTTTCTATGAATGAGAGCATCCTGGTTGCTCTACAGATTTACTAATTCGGTCACGAATTCCTCAAAAGTACTATAAAAGGAGTGTATTTTTATATCCTAAGCGTGTCAGTAGAGTCTCAGCCGAGATGCTTTGCTGGTTTATAAGAGGTTTGCTCTGAGGCTCGAGCTGTAGTCTGCGGAAGGAAACCCAACTCACAGGAATACGATGGTTTGAGGTCTTGCGCATGCGCAGTAGCGTGTGAGGGTATTTAAATATGGGCTGAAGAATCCAGCAGCGCAACACAAACACTTTTCATCCGTGTGAGAGTCACCATGAGCTGGGCCATCGGCACTCTGGCCGTGGGAATGGTCACGCTTCTGCTCGTTCAGAGGAAGTTTTACCCCTACTTTTGGGACGATCTGATGTATTTCGCGAGAGTTCGGCGCGTGGGGAGCGCGATGAAGGCGAGGATGAAGCGCGGAGTTGTCACATACCTCCAGCTCTTTGAGCAGCAAGCCAGAAACAGCCCGGAGAAGCCCTTCATTGTCTTCGAAGAGCAAACCCTGTCGTACGGAGACGCGGACGCGCGCAGTAACAGATTCGCGAGCGTGCTGGGAGCGCGCTGCGGGCTGAAACGCGGCGATACTGTCGCGCTGCTGATGAGCAACGAGCCGGACTTCATCTGCGTCTGGTTCGGCCTCAGTAAACTAGGCTGCGAGGTCGCCTTTCTCAACTTCAACATCAAGTCTCAGTCTCTGCAGCACTGTCTGCGCGGCTGTGCGGCGAAAGCGCTCGTCATTGGCTCAGACTTGCTCCGGTGTCTGGACGAGGTGCTGCCGGCGCTGATAGATGCTGGGGTCAAGGTTTGGGTGACCGGGGAGAGATCCTCGCACCAGAGCATCGGGACGCTGCTGGACAAGCTGGAGTCGGCCTCTCCAGAGAAACCGTTGACCGACGGCTCTCAGCCTGACCTCCTGTCCAccttcctcttcatcttcacGTCCGGCACCACAGGGCTGCCGAAGGCCGCTCGGATCAGTCACATCAAAGCGGTGATGTGCATGGCCTTCCTGCGTCTGTGTGGAGCTGTGGCCCGTGACCGAGTCTATGTGACGCTGCCTCTCTACCACATGTCTGCATCTCTGCTGGCCGTCGGTGGCTGCATCGAGCTCGGGGCAACCTGTGTTTTGAGGAGGAAGTTCTCTGCCAGCCAGTTCTGGAAGGACTGTATGAAGTATGATGTGACTGTGTTTCAGTACATCGGAGAACTCTGTCGATATCTGGTCAATCAGCCAAAAACTATAGAGGAAGTGACTCATAAAGTTAGGCTCGCTGCAGGAAGTGGTCTCAGAGCTGATGTTTGGAAGCAGTTCCTCAGACGTTTTGGAAAAATCCAAATTCGTGAATCCTACGGTTTAACGGAAGCCAGTATTGGCTTTGTTAATTACACAGATGAAATCGGACCGATTGGGCGAGccagttattttaataagctgaatTTGCCgtttgagtttttaaaatgtgatccACACACGTTTGATCCGATACGGACAGATACAGGACACTGCATTAAAGTGAGTAAAGGGGAAGCAGGGTTACTGGTGGCTCCGGTGACCTTCACCAACCCTTTCCTGGGATACGCCGGTGATAAAGCCATGTCAGAGAAGAAGCTGTTGAGGGATGTCTTTAAGACGGGAGATGTGTTCTTCAACACAGGAGACCTGATGCTTCAGGACCACAGAGGCTTTGTCTACTTCAAAGACAGGATTGGAGACACATTCAGGTGGAAAGGAGAAAACGTGTCCACCACGGAGGTGTCTGAAGTGCTGGGCAGCCTGGACTTTCTGCTGGACGTCAGTGTGTACGGCGTCTCTGTGCCAGGGTACGAGGGCCGGGCAGGAATGGCCGCTGTGGTCCTGAAGGACGATCAAGGGCTGGACGGAGACAGACTCTACAGTCATCTGACGCACTCTCTTCCTCCGTACGCTTGGCCCTGGTTCCTGAGAGTACAGCCTTCCTTAGACGTGACAGACACGTTCAAGCAGCAGAAGGGCAGGCTGGTCCAGCAGGGCTTCAGTCCAGAGACGGTCCAGCAGCCGCTCTTCTTCCTGGACGCCGCTCAGAAAACATACTCTCCTCTCACGGAGCAGCTCTACCACGACATCCTCTCAGGACAGATCAGACTCTAGAGGCATTGTGGGAAATGCAGCGACGTTTCCACAGTGATCCTTGAGTTAGTGAACCGTCTGATGTTAACCGCACAGACTTCTGGGAGCTGCTGGGTTTTCCACTGAGCCCACAAATACTGGAACGACTTTGTTAGGATTTCTTAACATGGATACAGAAAATGAACTAATACTAGAGTCAGTATATTCTTAACCACTTCACTCAGCTCATAACATTTGAGTaaagattttagatttattttaagagtATAGCAGCAGCTTTAATGTTATCTGCTCTTGATAATCATGTGGGCTAAAAAATCTTCATCTAAACGTAAGGCTGAGGAAGATCACAGTGTTTGTGGTGtgtttatatcttttatatcAAACAGCTTCTGACTAGTTTTTATAACTGCTGCTATGAACATCAAAGAGCAGACCTGTCATGTCATTTCTACAGAAGTGATGTGATTCAGTGATCTAGATCTGTTTGAACTTCagatagatatttttaatataaacctTTCACTCGA
>XM_043250978.1
taaaatacaccAAACCTAAATCTACCTGTCACTCAAAACATGTTATATTTAGATGTTAAAACACGTTATTGGTCAGATTGAGGAAAGCAGACAGACTGAGTTTAGTTTGAAGAGTGTGTttagagagaggagaggagagacgGGTCAAACCCGGCCGAAGCGGAGCATGTTACCAGAGGTTTGTTTCAGAATCTCTAACTCTCTGACAGTTTGAGTCAGTGTTCAAACCCTTATACAAAGTACCCACATTTGTTCTATTCCAGAGCCCTGGGAGAACGTTACGGCCCTTGTGACGTCAAACACGAGCAGTGACTGCCAGAGAAGACAGAAACAGCAGAAATACACTTTAAACAAGCTTCTCTGAAACTAAACAGTGTCTGAGTGTCCTGTTACAGAACCAgagatattttatttctaacCCAGTGTACAGTATGGACATTAGAAAGCTTAAGATTAGTACTAGAGTACGTCTGAGCCTGATACAACTGAAAGTATTTTGCAGAATTTCATTCATCTAATATAGAAGAGACAGCATGCGTCTCACTGTGACTGGACTCATATGTTTCTAAtctataatattttgttgcattttataattacGTCTAAGGTGTTACAAGTTAAGTTGGGACACCATGATTTTTAAACTGGAGAAGTTGGATGTTTTGGGAAAAGTAACTTCTTTAAATGATCGGTTTAACACACAAGACTTGTTAACAGGGTTAGAGTAACGACTTCAGTGAGGAGATGTTTTGTTTCCAGATAAAGTGATATTTTCTGACAGGTTTTTCTGACACTGAAGCATCTCTCAGAGGTCACTGAGATCGTTCTCTTGAAGTTTAGCGCCATCTTGTGGATGTCTTCATTACCTCTGCACTCAGAGTAAAATACTGTACTTAGTGTCAATTAACCCAGAAgccagttgttgtttttgatattcatttatatttataaatgtcatcACCAAGGTACTAAAAATCTGATTCCTAAAAGACAACCAAATGTTTGCTGTTGTAAGAAGcatctgttttctctctcaatGCTTTAAActctcatttatttctgtgatgataAATCtgaatcttcagtgtcacgtgatccttcggaaatcattctaatgttgatttgctgctaaaaattattatttttttgctacaAAACAACTGCTATTCAAAGGTCTGTACTaagtaaaataacaaacacGGTAAAGACAACTTTAATGgtacaaaatatttgaataaatgctattcttctgaacttttgatacatttgtgaatcaaaaaaaataaataaataaatgcgcaATTGTTTTTAACTCTTAAATTGtgaagtaaagtaaagtaattgTAAAGTGTAAcctatataataaatgtgttaaagtgtTACTAAGTTGGCAAATCATTAACAGTGCACCTATGGGCAATACAAAGGTTATTGTCTGTTTACTGTCATAATTTTATAATCGTGTAAGATAAACTCATGTTTTCTATGAATGAGAGCATCCTGGTTGCTCTACAGATTTACTAATTCGGTCACGAATTCCTCAAAAGTACTATAAAAGGAGTGTATTTTTATATCCTAAGCGTGTCAGTAGAGTCTCAGCCGAGATGCTTTGCTGGTTTATAAGAGGTTTGCTCTGAGGCTCGAGCTGTAGTCTGCGGAAGGAAACCCAACTCACAGGAATACGATGGTTTGAGGTCTTGCGCATGCGCAGTAGCGTGTGAGGGTATTTAAATATGGGCTGAAGAATCCAGCAGCGCAACACAAACACTTTTCATCCGTGTGAGAGTCACCATGAGCTGGGCCATCGGCACTCTGGCCGTGGGAATGGTCACGCTTCTGCTCGTTCAGAGGAAGTTTTACCCCTACTTTTGGGACGATCTGATGTATTTCGCGAGAGTTCGGCGCGTGGGGAGCGCGATGAAGGCGAGGATGAAGCGCGGAGTTGTCACATACCTCCAGCTCTTTGAGCAGCAAGCCAGAAACAGCCCGGAGAAGCCCTTCATTGTCTTCGAAGAGCAAACCCTGTCGTACGGAGACGCGGACGCGCGCAGTAACAGATTCGCGAGCGTGCTGGGAGCGCGCTGCGGGCTGAAACGCGGCGATACTGTCGCGCTGCTGATGAGCAACGAGCCGGACTTCATCTGCGTCTGGTTCGGCCTCAGTAAACTAGGCTGCGAGGTCGCCTTTCTCAACTTCAACATCAAGTCTCAGTCTCTGCAGCACTGTCTGCGCGGCTGTGCGGCGAAAGCGCTCGTCATTGGCTCAGACTTGCTCCGGTGTCTGGACGAGGTGCTGCCGGCGCTGATAGATGCTGGGGTCAAGGTTTGGGTGACCGGGGAGAGATCCTCGCACCAGAGCATCGGGACGCTGCTGGACAAGCTGGAGTCGGCCTCTCCAGAGAAACCGTTGACCGACGGCTCTCAGCCTGACCTCCTGTCCAccttcctcttcatcttcacGTCCGGCACCACAGGGCTGCCGAAGGCCGCTCGGATCAGTCACATCAAAGCGGTGATGTGCATGGCCTTCCTGCGTCTGTGTGGAGCTGTGGCCCGTGACCGAGTCTATGTGACGCTGCCTCTCTACCACATGTCTGCATCTCTGCTGGCCGTCGGTGGCTGCATCGAGCTCGGGGCAACCTGTGTTTTGAGGAGGAAGTTCTCTGCCAGCCAGTTCTGGAAGGACTGTATGAAGTATGATGTGACTGTGTTTCAGTACATCGGAGAACTCTGTCGATATCTGGTCAATCAGCCAAAAACTATAGAGGAAGTGACTCATAAAGTTAGGCTCGCTGCAGGAAGTGGTCTCAGAGCTGATGTTTGGAAGCAGTTCCTCAGACGTTTTGGAAAAATCCAAATTCGTGAATCCTACGGTTTAACGGAAGCCAGTATTGGCTTTGTTAATTACACAGATGAAATCGGACCGATTGGGCGAGccagttattttaataagctgaatTTGCCgtttgagtttttaaaatgtgatccACACACGTTTGATCCGATACGGACAGATACAGGACACTGCATTAAAGTGAGTAAAGGGGAAGCAGGGTTACTGGTGGCTCCGGTGACCTTCACCAACCCTTTCCTGGGATACGCCGGTGATAAAGCCATGTCAGAGAAGAAGCTGTTGAGGGATGTCTTTAAGACGGGAGATGTGTTCTTCAACACAGGAGACCTGATGCTTCAGGACCACAGAGGCTTTGTCTACTTCAAAGACAGGATTGGAGACACATTCAGGTGGAAAGGAGAAAACGTGTCCACCACGGAGGTGTCTGAAGTGCTGGGCAGCCTGGACTTTCTGCTGGACGTCAGTGTGTACGGCGTCTCTGTGCCAGGGTACGAGGGCCGGGCAGGAATGGCCGCTGTGGTCCTGAAGGACGATCAAGGGCTGGACGGAGACAGACTCTACAGTCATCTGACGCACTCTCTTCCTCCGTACGCTTGGCCCTGGTTCCTGAGAGTACAGGTTCAACGCCGCAGACTCGTGGATGAAAGAACGGCACACGTTCCTCTCATTCAATAAATCAGAAGGGAATAAATCTTTACTACTTTTGATTAGGGCTGTCagttgatttaaatgttttaatctaattaatgaCATGATGTGTCGATTAATCAATCAAATGAATCACATAATATATTTGACTGTGAACGTACCcttaaaaaagattatttaaagctTTAGAGTTAAGTAtcaagtgtatatatataaaaaatatagctttacaaaggaatatttttatttgatcaaacataaaATGTTCCTTCAAAAGTcttcattcaggaatgaagtAAAAGACTCTTTTTGTTCAGATGACTGTCACACGTTACTGGATCAATAAGACGGCTGGTTAAACTCATGATATTGTGTTTAAACACAAAACTTCTTATTGATGTATAAAAGCTTGTGTTATTCAAAACTCTGATATTGCTCTCCCTGCTTGTGTGATATtgtatgatatataaatattatactcGTAGAGATGCATTTCTTGCCCCAACATCTAATTTTAGGGCATAACTGCATTTAGCGTTTATGTgtgcgtgcgagtgtgtgtgcgcgcgcgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgt

Function

NR:

description
PREDICTED: long-chain fatty acid transport protein 6-like

GO: NA

KEGG:

id description
K00666 K00666; fatty-acyl-CoA synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250977.1 True 4138 mRNA 0.45 10 227186 237306
XM_043250978.1 False 4103 mRNA 0.44 10 227167 236146

Neighbor

gene id symbol gene type direction distance location
LOC122353215 NA coding upstream 132963 93311 ~ 94204 (+)
aldh7a1 aldh7a1 coding downstream 175587 412893 ~ 420454 (+)
sub1a sub1,LOC107686443,LOC107562553,LOC107685153,LOC107713349,LOC107571107,LOC107552599 coding downstream 267054 504360 ~ 506120 (+)
pstpip2 pstpip2,LOC107744171,LOC107685173 coding downstream 270298 507604 ~ 515636 (+)
mtrex skiv2l2,LOC107744101,LOC107571110,LOC107713350,LOC107686493 coding downstream 299102 536408 ~ 564154 (+)
hvcn1 LOC107686438,LOC107744097,LOC107562590,LOC107685148,LOC107575472 coding downstream 376568 613874 ~ 616743 (+)
G73467 LOC107580357 non-coding upstream 7543 208899 ~ 219624 (+)
LOC122353056 NA non-coding upstream 22603 202451 ~ 204564 (+)
G73469 NA non-coding upstream 25501 201446 ~ 201666 (+)
G73468 NA non-coding upstream 28526 197937 ~ 198641 (+)
G73461 NA non-coding upstream 33023 193886 ~ 194144 (+)
G73465 NA non-coding downstream 50563 287869 ~ 292267 (+)
G73523 NA non-coding downstream 110242 347548 ~ 347907 (+)
G73519 NA non-coding downstream 111727 349033 ~ 397101 (+)
G73559 apbb1,LOC107750985,LOC107673752,LOC107565841 non-coding downstream 187647 424953 ~ 427515 (+)
G73560 NA non-coding downstream 191550 428856 ~ 429270 (+)
LOC122352377 fbn2,LOC107705843,LOC107575594,LOC107565844,LOC562634 other downstream 4937 242243 ~ 286240 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other downstream 159134 396440 ~ 398859 (+)
pmaip1 NA other downstream 445800 683106 ~ 774374 (+)
isl1b NA other downstream 454818 692124 ~ 695923 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other downstream 558705 796011 ~ 801923 (+)

Expression


Co-expression Network