LOC122353145 (LOC107701914,LOC108437168,LOC108277112,LOC105013038)


Basic Information

Item Value
gene id LOC122353145
gene name LOC107701914,LOC108437168,LOC108277112,LOC105013038
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15316648 ~ 15341965 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251064.1
AATTTTGCTGGTCGGCAGAGGAGGCGTTGTCCCACATTAGAACGTCACCTTCATTAATGCAGAAGCCGGTTATCCTGGAAAAAGACAAAGGTTTTTCAGTCCTGTAACAAGCGCTGAATACCAGTGAATATCATCGATTTGACTTTACTTTGTGCTAAAGTGCTTGTCAATAGGGCTGTATAAAATGATGAAGAACGGTCATCATGTGAGCAGCGCTCCGGCCGCCGCAGCCTGCAGTCCGGAGAAGAGGAGGCGTACTGTCCGCGTCTGGTGCGATGGATGCTATGACATGGTCCATTATGGTCATTCCAACCAACTTCGACAAGCCAAGGCTATGGGGGACTATCTCATTGTGGGAGTGCATACCGACGAGGAGATCTCTAAGCACAAAGGTCCTCCAGTGTTCACCCAAGCTGAGAGATATAAGATGGTGCGAGCAATCAAGTGGGTGGATGAGATTGTGGAAGGAGCTCCATACGTTACTACACTTGAGACTTTGGACAAATATTCTTGCGATTTCTGTGTTCATGGAGATGACATCACTCTCACAGTAGATGGGAAAGATACATATGAAGAAGTGAAGAAGTCGGGTAGGTACAGGGAATGCAAGAGAAcccaaggtgtgtccactacaGATCTGGTCGGCCGCATGCTGCTTATGACCAAAGCTCATCACAGCAACATGggCAGTTCAGACTATCAACAACACACAGACAACTTTGGAAGAGGCCCTAAAGGCCACAGTCCCTGGACAGGAGTGTCACAATTCCTGCAGACATCccaaaaaataattcagtttgcCTCAGGAAAGGAACCACAGCCGGGAGATAGCATCATCTATGTGGCAGGAGCTTTTGATCTATTTCATATTGGCCATGTGGATTTCCTGGATGCAGTGTCCCAGCTTTTAGAGAAGCCGTATGTTATTGTAGGCTTGCACTTCGATCAGGAGGTAAATCGTTACAAGGGGAAAAACTACCCAATCATGAACATCCATGAGAGGACTCTGAGTGTGCTGGCCTGTCGATATGTCTCTGAGGTTGTTATAGGAGCACCATATGCTGTCACAAAAGACTTATTGGACCATTTCAAGGTAGACCTGGTGTGCCATGGAAAAACTGAAGTGTTTCCAGACAGAGATGGATCAGACCCATATGCTGTACCCAGAAAAATGGGAATATTGCGAACAGTGGATAGTGGAAACAGTCTTACCACTGATGTCATTGTGCAAAGAATCATCAAAAACAGGCTGCTGTTTGAGGCAAGAAACCAGAAAAAAGAGGCCAAAGAGATGGCGGTGATCCAGGCTATGAAGCGACGAGAAGAAGAGAAAGCTAAAGAGAGAGCGCAGGCTGTGCTGTAGGGAAGGGGAAAAACATCATGAAAGACTAACAAAACCCAGTACATGCAGTTGACTTTTTTCTAATGTTTCAACATTCTGGACTTACATACTGTCAGAACACCAGCAGCTGAGAGctccttttattaaataattagcatGTGTTTTTGGGAGCATCTGCTTTTGTGAACCACTCTCACACTCTCCAACTGATGGCCcttttcatcatttactgatTGCAGTGGGCCATTTCCATCAGATCTGTTCACTAAGGAAATAAGGAGGCTGTAACTTGTGCTGCACTTTGTTGTGTGCAGGATGTTGCCACTTTGGTGACCAACATGACCTACGTGACCTTTACCTCCACATCTAATTCCAGAGTTGTTCTAAGCTTTGCTTGGAAACCAACACTCCTGAAGATATGAACCCATCAGAAGAGCACTAGTCTTCTGTCCTAAACAGtgtattaattatgaataattaatatttatctgTCATTATTAATGGCTAATCCTCATAtgaagtatttttcattgtaagGTATATAAGAAAGTGAAttgttctattaaaaaaatatatgaaaataatagtTAAGATATGGTGTTTATCAAACATGgggtttaatttagttaaaaaccccacaaaaaatgtttgtttattatagtttttgaaCTTAACCATTATAACTAGTCAAAAGAATATAATGTATTTCAGGATGTTTTGTTAGATACATTTCCCTAGACAGATAAATGTCCAAGGGTATAggtcacaaaaaaaattcactcgTGGCAATCCACTCACCATAAAAGTttacatatattgtattttattttcccaaacgtcttcttttaaaaaaagagttttgtgtAAACAAACGGCATGAAATGTCagtcttatttacatttttactgtcacatttctttaaatattttgtggaCAAATGAAAACTTTCCATTTCATAAATtacaaaactttatttcatGGTGAAATTTTcctttaaactaaaatacaatatatgttttaaatggatttagaattaaataattCTAGAGTGAAAGAGCTGA

Function

NR:

description
PREDICTED: ethanolamine-phosphate cytidylyltransferase-like

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K00967 PCYT2; ethanolamine-phosphate cytidylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251064.1 True 2403 mRNA 0.40 13 15316648 15341965

Neighbor

gene id symbol gene type direction distance location
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding downstream 780 15307899 ~ 15315868 (-)
LOC122352451 LOC106676183,LOC106674878 coding downstream 10240 15305535 ~ 15306408 (-)
LOC122352450 NA coding downstream 201200 15111412 ~ 15115448 (-)
si:ch211-256e16.3 si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741 coding downstream 687574 14620986 ~ 14629074 (-)
LOC122352591 uqcrc2a,LOC107671252,LOC107717493,LOC107552131,LOC107674831 coding downstream 698038 14611801 ~ 14618610 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding upstream 5502 15347467 ~ 15362276 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding upstream 341306 15683271 ~ 15684293 (-)
LOC122352456 LOC107679515,LOC107565282,LOC107730972,LOC107694558 coding upstream 353455 15695420 ~ 15697678 (-)
LOC122352458 NA coding upstream 363260 15705225 ~ 15706280 (-)
LOC122353072 NA coding upstream 371416 15713381 ~ 15714427 (-)
G77692 NA non-coding downstream 40644 15273913 ~ 15276004 (-)
G77676 NA non-coding downstream 156801 15159465 ~ 15159847 (-)
G77674 NA non-coding downstream 160057 15156349 ~ 15156591 (-)
G77672 NA non-coding downstream 177641 15138607 ~ 15139007 (-)
G77669 NA non-coding downstream 213079 15102149 ~ 15103569 (-)
G77700 NA non-coding upstream 3035 15345000 ~ 15347289 (-)
G77703 NA non-coding upstream 26436 15368401 ~ 15368676 (-)
G77706 NA non-coding upstream 50123 15392088 ~ 15394552 (-)
G77715 NA non-coding upstream 302438 15644403 ~ 15647863 (-)
LOC122352661 NA non-coding upstream 485119 15827084 ~ 15827556 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 26976 15229969 ~ 15289672 (-)
G77671 NA other downstream 208896 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 726749 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 831356 14484799 ~ 14485292 (-)
LOC122353009 LOC107562038,LOC107562041 other downstream 835199 14467186 ~ 14481449 (-)
G77702 NA other upstream 15720 15357685 ~ 15358232 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 550679 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 674706 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 688562 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 830513 16172478 ~ 16177111 (-)

Expression


Co-expression Network