auh (auh,LOC107720385)


Basic Information

Item Value
gene id auh
gene name auh,LOC107720385
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3773510 ~ 3790180 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251077.1
CAAATACGTCACTCGCGGTTCAGAGTTGAAGGTAAAGCTGAAGCATGGCGGCTTTAGTAAACTGCAGAGCGGTGTTTCAGCCTTTCCGAGCTCAAATAAACTTTATCGGCGGCGTCTGCAAACGGGACAGCGTTTTGCACGCGTTTCTAACCAAGAGAGCGCCTCGCTGTGTGCGACTGAGCAGCTCAGACGTAAAGTCTGGAGATGACCTTATCGTTAGATACTTGGACGGTGATGACTCAGGGATTGTTGTTTTGGGGATTAATCGCCCTCAGTCTAAAAATGCCATCAGCAAAAATCTTGTTACAATGATGTCAGAAGCTCTCGAGTCATTAAAGCAAGACAACAAAGTGCGTACTGTAGTTTTGTGCAGTATGGTGCCTGGAATATTCTGTGCAGGCGCAGACTTGAAAGAAAGAGCAAAGATGCAGCAGAGTGAAGTAGGACCGTTCGTGACTAAAGCAAGAACGCTAATAACAGAACTTGgCACTCTTCCCATGCCAACGATCGCAGCCATTGATGGAGCAGCTCTTGGAGGAGGTCTTGAAATGGCTCTTGCCTGTGACATCAGAGTGGCAGCCAGCTCCGCTAAGATGGGACTAGTTGAGACCAAATTAGCCATCATTCCGGGCGCTGGGGGAACTCAGCGTCTGCCACGAACTGTAGGAGTGTCTGTAGCTAAAGAGCTGATATTTGCGGCACGGGTTCTGAGCGGTGACCAAGCCAAGAGTCTGGGCCTAGTGAATCACGCTGTGGAGCAGAATAAGAGTGGAGATGCGGCGTATCTGCGAGCTCTGGATCTGGCCCGCGAATTCATCCCTCAGGGGCCAATTGCGATTCGAATGGCGAAGTTAGCAATCAACCAGGGAATAGAGGTGGATTTGAAGACCGGATTAGCTATTGAAGAGGCATGTTATGCTCAGGTGATCCCGACCAAAGACAGGCTGGAAGGTTTGCAGGCGTTCAAAGAGAAACGTCCTCCTCACTATAAGGGCGAGTAACTGTGGCCTAACCAACCCAATTACAAGCAGCTGCCTTTTGAATCGCCTGCCACTGCTGGAAATTTTCATAAAGAATGTTGCATATCTGAAATGTTTGGAGCACTGCTGGGTCCCTGGGGGCCCGATGACGGGATTCaagctgaaatgtttgaaaGATGAAAGCAATTCCAACTTCTTTTTGCATGGTATGTCcttttgttaacatttgttCATTCTcatctgttaaaataaaatggtttgccttttttaaattaactcaAAATGCAACTTTTCCAATGTACAATACTCTGTTGATGATGTGTCTGCTCTGAGGAACATACAACCCTAACTAAATCTGGTTGGGTAGGTTGATGTTATGCATCAAAACTGCTTTCACTTTAAACATGTTCATGTAAGCAGTCAATGTCCACCCAGTTTTTGCCCTAAGGgtaatgtttttagaaaatgtggtgttgtgaatatttttaatttatgtaataaaaaaattaagcaca

Function

symbol description
auh Predicted to enable enoyl-CoA hydratase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in 3-methylglutaconic aciduria type 1 and renal tubular transport disease. Orthologous to human AUH (AU RNA binding methylglutaconyl-CoA hydratase).

NR:

description
methylglutaconyl-CoA hydratase, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K05607 AUH; methylglutaconyl-CoA hydratase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251077.1 True 1495 mRNA 0.46 10 3773510 3790180

Neighbor

gene id symbol gene type direction distance location
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding upstream 800 3768754 ~ 3772710 (+)
ror2 ror2,LOC107702585,LOC107683466 coding upstream 5837 3709666 ~ 3767673 (+)
sptlc1 sptlc1,LOC107715883,LOC107720388,LOC107702586,LOC107683465,LOC107560407 coding upstream 65196 3697541 ~ 3708314 (+)
carm1l LOC107702592,LOC107715849,LOC107679043,LOC107573847 coding upstream 132649 3627167 ~ 3640861 (+)
LOC122352579 LOC107702598,LOC107715893,LOC107653494,LOC107732273 coding upstream 205013 3496746 ~ 3568497 (+)
ankrd55 ankrd55,LOC107702571,LOC107670032,LOC107737049 coding downstream 17834 3808014 ~ 3818485 (+)
il6st LOC107715880 coding downstream 31157 3821337 ~ 3834370 (+)
st8sia4 st8sia4,LOC107702581,LOC107670050,LOC107558264,LOC107560405 coding downstream 93079 3883259 ~ 3891247 (+)
syk syk,LOC107715877,LOC107736968 coding downstream 122085 3912265 ~ 3935837 (+)
map3k1 map3k1,LOC107558252,LOC107670047,LOC107715839 coding downstream 169861 3960041 ~ 3999938 (+)
G74585 NA non-coding upstream 4858 3768201 ~ 3768652 (+)
LOC122353153 NA non-coding upstream 185616 3587363 ~ 3587894 (+)
G74392 NA non-coding upstream 992193 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 1056753 2716522 ~ 2716757 (+)
G74388 NA non-coding upstream 1057218 2715379 ~ 2716292 (+)
G74596 LOC107715844 non-coding downstream 64136 3854316 ~ 3858952 (+)
G74626 NA non-coding downstream 101711 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 330684 4120864 ~ 4122658 (+)
G74680 NA non-coding downstream 361278 4151458 ~ 4153279 (+)
G74681 zgc:194281,cunh5orf30,LOC107665462,LOC107740794,LOC107670048,LOC107564120,LOC107715868 non-coding downstream 364867 4155047 ~ 4160317 (+)
cdc42se2 cdc42se2 other upstream 78914 3669003 ~ 3694596 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other upstream 105504 3663912 ~ 3668006 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other upstream 155994 3588244 ~ 3617516 (+)
LOC122352388 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558,LOC107737170 other downstream 222854 4013034 ~ 4120447 (+)
LOC122352783 tln1,LOC107715875,LOC107670039,LOC107568645,LOC107702558 other downstream 691087 4481267 ~ 4529002 (+)
LOC122352404 LOC107670527,LOC107567246,LOC107587997,LOC107757377,LOC107711240,LOC107672489 other downstream 1326686 5116866 ~ 5123373 (+)
LOC122352567 ywhah,LOC107562560,LOC107744159,LOC107713377,LOC107555530,LOC107688000 other downstream 1448099 5238279 ~ 5250137 (+)
G74965 NA other downstream 1466658 5256838 ~ 5258823 (+)

Expression


Co-expression Network