pom121 (pom121c,pom121,LOC107728848,LOC107697416,LOC107743381,LOC107577844,LOC107686167)


Basic Information

Item Value
gene id pom121
gene name pom121c,pom121,LOC107728848,LOC107697416,LOC107743381,LOC107577844,LOC107686167
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 13628833 ~ 13638224 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251134.1
CGGACGCAGGGAATTATGGGATATCTTCCCTCGGCGGCGCGGTGCCGCCATGTCTCCTGAAGATAAACGGCGGCTAGTCGTTTTCACCGCTGCGGTGTTTTCTTTGTTCCTCCTTTTACTCGTGTTGAGCTACATACCAGCTTATTTGTATATACTTTTTATCTGCGTCGTGtcttgtgttgtttattttcacaaaGCGGAGGAGTTGCAGCTCTTCGAGAGACTAGGCCTCAATCCTCGCCGTGGACTGAGCGTTCCGTCGGCTCTGTTGCGCTGGTTACCGGGCAGGACTTTGAGCGGAGTCCCGGCCGCCGGCAGAAACAAGTTACGTAAAAGTGATGCTAGAAATTCCTTCGCGTCACCCAGCGATAGACACTTTGCGGGCTCGTATTATAGAAGAGACCACGCGCTCAGCGACTCGGTGTTCAGCCCTCGGGATATACTCATGGGAAGTTACCTCGCCAAGACTGAAGAAAGCCCCTCCGCAGCGGTGAGGCCCGCTGGAGGCTCGGGGGCTTTCATGCACCCCAGAGATCAGCTCCGGGAGAGACTCGCCCGGCCTAATCATGCTGTGCACACCCCTAACAGAAGACTGTCATTCGGGGACCCTGTGGGCACTGCAAGTCGGTTCACCATCACCCCCCAAAGACATTACCCCCTTCAGCAGATGGGGACGTCCCCTGTTGGAGTGATGCCACCTGCAAACTGGGATGGTTTCCGTAAGAAGAATGTCCTCACACAACGCAATTCACCTTCAGTTCACAGTCCTGTCACAGTGAAGATCGCCAGACCAGACCCCGCTCGATCATCATTCTTCAATCACCTGAACTCCCCTGGAGCAGTCAAATCTCCGGGGATTGGAGCCCAGACAGACCCCTGCTCTAGAGAAGCTGTTCTCAGCGTGCTCAGAGAAAGCAGAAAAAGGGAAGTTGATGAGGAGGACAGGAGTGCTTCCTCTGGCCAGAAAAGCAAAAGGAGGCGACATGACAGCAGTGGAAGTTCTCAGTCAGCATTTGAGCCACTTCTTGCAAATGGAGCTCCATCTCAGCTTGTTCCAAAACCAGGCAGTCTGAAGAGAGGGATGAACTCTTCTCTTATTGAGGAATCCATTATGAAGCGATCTCGCACCTCTTCTATCAGCTCTGTAAGTGGTGCTCCTGTTCCCAGCGGGGTGCCTGGATCTGTCCGAAATCCCATTCGCAGTTCTTACAGCTCTTCACAGGGTTATCCACAGAGAAGAGCAGCATCCAGTCTCAGTCTTTCTCCTTTCACAAGCCCAGGAGGATCTCGGTGTCAGACACCAGAGCGAGCTGCCAAGAAATCAAGGGAGGAAGAGGCTACCTCACCAAGTTCTACATTCTTTGTGAAATTGGATAAGGTAGCAACTGATCCTGCACCTGCTACAACTAAAGTAACTCCAAAATCTGAGGCACCTGTTGCAACATCGACCTCTGACTCTGGAGGCGGCAGTGGCAAACGTAAGCGCAAAATCCAGCTTGTGACCACAAACAGAGGAGATCAGATTTCTTTGCCACCACCTCCTGAACTGGGCTATACGATCACAGTGAAAGATTTAGATATGGAGAAAAAAGCAACTCTCAGCCAGATACAGAAGGTCCTGGAGGAGCCTGAGCCAGAGATCACTCCTCCAGCTTCCGAACCCACCCCAAATTCGGCTCCCACTTTAACCCTGTTTTCTCAGCCAGCTCCATCTTCTTCGTCTGGGTCTGCACCTGCCGTGAGCATTGCACCCTCTCTGATTTCTCTCTCCAAACCTGTGCCTGAGACCACACCAGCCACTACTATAACTCCTGCTCCAACTATAGACCTCACCATCCCTTCTCCTAGTGTGGCTAGTACAGCACCCCTGACTCTCACCTCAGTCCCCTCCATATCTACCACCCCAGCTGCCCCGACTGCTCCAACTGCTCCATCTTCAAGCATCTCAAACCCGCTCCTGGAGTCCCTGAAAAACATGAAGAATACTCCGCTGCTTAATGCCCCCACATTAATGGGTACTACCACTGCAgCTCCAGCAATGTCTGTGCCCAGTCTTTCTACACCTGCTGTAGCCCCCACAAACCCGAGCAGTGGAGTTGTCAAATCTGAGTCAGGCCCTACTGCTCTGCAGCCCTCATTCTCTACCCCTTCCTCTATATCAACACCTGCCTCCAAGCCACCTACTTCCATGCCCTCTGCCTTCGCTCAAATCCTGGCCCAACCTCTTCAACCCTCATCAAGCAAGCTTTCCTTGGGCGGAGGAGGCAGCCTGTTCAGTTTGATTAAACCTGTGGCCACTCCTGCATCTGAGCCACCTAAATCCACAGTTGCTGCACCTACGACCACAGTTGCATCAGTCAATAGCATTAGCAACCCCCTGTCATCTGGGTTTAAGCCCATTTTTGGCGCAGGAAGCACCATGCCTGCTTCCACAGCAGAGGTCAAACCCACCCAGCCCACCTTCAAGCCTTTATTTGGAACAGGAAGTGGCATTAGTGCCTTCGGGCAGACAGCCACACCAACGACATCAACCCCTGCTGCTCCAGTTTCACAGAACAGCGGGATGTTATTCAGTGGACTTACCGGTACCCAGCTAGCCACGGTGTCCACATCATCTGCTGCCCCAACCACGCAAACTCCTTCCCAGTCTCTGTTTGGAGGATGGACCGCAACAACCACATCCGCTCCTGCCACAAACACCGCATTCCAGTTTGGAGCCACATCTACTACGACGGCCGCCCCGACGCTGAACACCAACAATGTTAATGCCAGCGGCACCACTTCCGCTTTTCAGTTTGGAGCTGCAAAACCTGCACCTGCCGCACAGACCCAAAGCACATTCTCTTTTGGTCAGCTGTCAGCAAACCAGAATTCCACCTCCACTTCCTTTGGTGGATTCGGCATGACCAGCAGTACGACTACATCTTCAGAGACACCCACCACGCAAACCACATTCGGGAGCTCAACCTTCACTGCATCGTCAACCTTCCCAGCATCCACACAGCAGACCCCTGCTGCTCCAAAGCCTTTCACGTTTGGCGGCGGTGGCGGCGGCGGCAGTGGtgttggtggtggtggtggcggCGGTGTAAATAGCGGCACATCACCATTTGTGTTTGGAGCCCCTGCCAGCACAGCAGCGCCTGCATTTGCGACTAACAGTCAGCCTACGTTCGGTGGAGCTGGCTTCTCTTTCGGAAACACCACCACCCCTTCTGCGGCTCCCGTCTTTGGGGCCTCCACACAGACTGTGGCTCCTCTCCCAGCCCCGGCTCCTGCATTCACCTTTGGAGGGGTATCAGCAGCCCCTCAGAACCCTGCTCCGAGTACTCCAGCGCCTCCTGCTTCGGGAGGGTTTAACTTTGGGGCCTCAGCTACACCGTTTGGAACCCCTGCACCTGCAGCTCAAACGCCAGGATTTTCTTTTGGAGCCAACAACACTGATAGCAAGCCTGCTTTTgGAACATCAACTCCTGCTTTTGGCCAGGCATCAGCGGGAATGTCAGTGCCATTTGGCAGTCCTGGAACCCCAGGATTTGGAGCAATGGGCACCTCACCATTTGGTGCTTCACCAGCCGCCTTCTCTATCGGAACAGGCTCCAAGACCTCTGGGGCTCGGCGATTACAAGCACGCAGACAGCACCCAAGGAAGAAGTAATGTGGCTGATGTGAGTCCTGTCCCTTTCATTATTGTCGTCTGGACTCTGCAACCTCTCCTCCGGCTGTCCCACCTGCCCCAGACACTGCTGCTACTGCTGCTGGTCCAAACACAACAAGGCTCTCAGTCAGACCTCATCTCTACAACCCTCCAGACTGCCAGGGCTGGTCAGGCGTGTAGGATCAAGGCTCATGGGGTATAGATTTAAGAGTACCGGGTGGTTCCGTCTCTGCTGTTGGTTGCGCCCACAGAGACCCATCACAACCTCGCTAATGGAGTCTATAAATGTCTGATGAGGATGTCTGGTGTTGGGGAAGGATGGTGAACGGGAGTGAATTATacttgaaagaaaaagagacttTCAAATCTGGACTCACACATGAATTCAGTCCAGGCCTGTTGAAAGGTcttatttttgacttttgtttGAGTAGtcaaatgctgtttattttagatccagtgaaatccttttttttttcttttcttgcaaTTAATGTAGAGCTGTTATGCTTTTTCACCATGCTTAGCAAAATCTTTTGTTAAGTCttcaaaacatgaatattttacCCGTTTCATTTaggaaaaaatgtttgttttttttgcctgaGTGagctaaataataaacaatcgACTTTTACATGGCTTTTTCTGCACGTTCCTGTAAGAGAAGCAATGTTCATTTACCTGTTTTCCCACATCTGTTTATCACACGTTGGACGTCCGTCTAAAACCAAAGCTGATGTTTTAGTGCGACTCACCTCTTCGTCCCACCATGCCCTGTTTTACTACCTctccattttaaatgtgcacctGTGTCCCGGCTGAGATGTTTTACTGCAGTCTGCCTCATTCAATCTACTGTTAATTCTACTCGGAGTAATTAAAATCAGCACTTAATGCAAACATGTAGGCAAAACTACAATTCTATATCCAtttcatctgccatcagtgtgTATTTGACTGTCAGGCACTGgaagttttgttttggtttttttttttttttaacccattcATTGCTCTGTGTGCCTTAGTGTGTTTTGCTTCTGGTTTCATATTATGGATGATGTCAGATTTGTACTCTGAGACATGGATGCCTGTTCTttcataataatgcatttcaaaagaaTACGATCTCAATTATTTTTGATTACTGACTAAAGAGTTCAATTTCAAACTCGGTAAAAGTGCATACTTGGGTTAGAATATTCTTTGGAGACATTTGACTAAGTGATCAAATGAAATAAGtgcaaaaaataactaaagTGCCCCAATAATTTCAGGAGCATAGAGAATGCGGCATTTGCATTGCTGAATGTtggtttaaaatcattttgctCATTTAGATTTGGTTTAACCTGGAGAggcttaaatgttatttatttttacagtttctttttcagttttacttttttttttttaacatgcatgaaAACCATTACTGAATTTTTGTATGAACCATTCCTGGCTTTGTATGAAATCTATGGTTTGTGCATGCTTgtgattgtgttttaaaataccGAGATATAGAGCAAATACTCAACTCGCGACTGAAAAGGCATGTCTTTAGGTTCCTGAATCAGCATCTGTTGGGAAATGCAGTCAAGACATTATGTAGGCCGCTGATACCTGAAGATTTAAAGTCTTAACATGTTCTCAGGTCTGTTAAGTGAAAGAGCTGTTAGTATCATTTGTTTTCAGTCATTATACAATGTTGTATATCCACAAGACACTGGATTTAATTAGTACGTCAATGCACAAAAATGGAAGCACAAAAACACCATTCATTTTAGaggtttattgtatttttatttggtttatctTCAATTCTTTGACCTGAAAATTCCACTGCAGTGGGGACAGCTGTTGTTTTTACGACGATGTAGCCATCGGTCCCCCTTATATGGCTTTTCTCACGTGGGtcttaatttgtaattaatccGATTTTTGAAGTATCCTCATGCCTAGACTTGATGCAAGGAGGCATGAGCCCAGgctttgtttattataaagcCTTACCAAATACAAGCGAGACGTGTAGACTGTTGAGAAAATGAGATGTGTGTTGAGATGAGAGCTGGATTTCTCAAGCTGTGAATGTTTGAGAGCAGTTGTACCTAGTTGTATGTTTTTCAGACGTTGCTGTTAGTGAATGctcagtttgtgtgtaaatgaccATACCCACTAACCCTCGAAGCGTGAATGGAGTTTTGAATGAAGCGGCACACTGATTGTGTTGTGTCTGCATAAATGCTCTGATAATGACATGCTGGTttccaataaaaatgtaaagttga

Function

symbol description
pom121 Predicted to enable nuclear localization sequence binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in RNA export from nucleus and protein import into nucleus. Predicted to be part of nuclear pore. Orthologous to several human genes including POM121 (POM121 transmembrane nucleoporin).
pom121c Predicted to enable nuclear localization sequence binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in RNA export from nucleus and protein import into nucleus. Predicted to be located in nuclear envelope. Predicted to be part of nuclear pore.

NR:

description
PREDICTED: nuclear envelope pore membrane protein POM 121C

GO: NA

KEGG:

id description
K14316 POM121, NUP121; nuclear pore complex protein Nup121

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251134.1 True 5952 mRNA 0.48 13 13628833 13638224

Neighbor

gene id symbol gene type direction distance location
ripk4 ripk4,LOC107589146,LOC107577855,LOC107686166 coding downstream 5965 13612144 ~ 13622868 (-)
c10h21orf91 zgc:110006,LOC107697414,LOC107734464,LOC107686165,LOC107589110,LOC107728860 coding downstream 20681 13589309 ~ 13608152 (-)
supt20 supt20h,supt20,LOC107728858,LOC107589048,LOC107697409 coding downstream 40707 13574431 ~ 13588126 (-)
alg5 alg5,LOC107728859,LOC107697411,LOC107589073,LOC107577823 coding downstream 57541 13566544 ~ 13571292 (-)
smad9 smad9,LOC107728873 coding downstream 63217 13558478 ~ 13565616 (-)
smg8 LOC107686170,LOC107589184,LOC107577889,LOC107743383,LOC107697419,LOC107728850 coding upstream 16531 13654755 ~ 13658687 (-)
prr11 LOC107728831,LOC107686171,LOC107589205,LOC107579091,LOC107743468,LOC107697420 coding upstream 20913 13659137 ~ 13662139 (-)
rhbdd2 rhbdd2,LOC107728880,LOC107686174,LOC107577912,LOC107697423,LOC107743386 coding upstream 42917 13681141 ~ 13684137 (-)
gabrr3a gabrr3a,gabrr3,LOC107589257,LOC107697425,LOC107686176,LOC106563567,LOC106603079 coding upstream 61010 13699234 ~ 13710448 (-)
si:ch211-244c8.4 si:ch211-244c8.4,LOC107728884,LOC107686180,LOC107743390,LOC107697427,LOC107577989 coding upstream 115945 13754169 ~ 13758259 (-)
LOC122352841 NA non-coding downstream 72176 13548254 ~ 13556657 (-)
G77294 NA non-coding downstream 72641 13555556 ~ 13556192 (-)
G77284 NA non-coding downstream 140000 13486267 ~ 13488833 (-)
G77245 NA non-coding downstream 299940 13328642 ~ 13328893 (-)
G77220 kl,LOC107577734,LOC107589796,LOC107728890 non-coding downstream 313259 13313194 ~ 13315574 (-)
G77315 NA non-coding upstream 31748 13669972 ~ 13670446 (-)
G77349 NA non-coding upstream 153097 13791321 ~ 13791934 (-)
G77347 NA non-coding upstream 161789 13800013 ~ 13800912 (-)
G77351 NA non-coding upstream 166259 13804483 ~ 13804892 (-)
G77352 NA non-coding upstream 166865 13805089 ~ 13805329 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other downstream 85218 13538156 ~ 13543615 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other downstream 95769 13492273 ~ 13533064 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 839738 12782353 ~ 12789095 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other downstream 859416 12678990 ~ 12769417 (-)
ccdc83 NA other downstream 2043873 11505310 ~ 11584960 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 4960 13643184 ~ 13654413 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other upstream 167880 13806104 ~ 13807819 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 564038 14202262 ~ 14204127 (-)
G77441 dlg1l,LOC107653521,LOC107705307,LOC107660320 other upstream 566192 14204416 ~ 14208006 (-)
G77443 NA other upstream 596282 14234506 ~ 14264322 (-)

Expression


Co-expression Network