LOC122353200 (pim3,LOC107732271)


Basic Information

Item Value
gene id LOC122353200
gene name pim3,LOC107732271
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15835096 ~ 15838380 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251162.1
GGGAGCTCTCGCGAGAGGTTTACTGTCTTTGAGAGGAGCATCACGCGCGAGGAGAGCATCGCTTCAGCGTTTGGTTTATCACCGTGAGACACACAGCACTCAGAATGAACAGaCTACATCTTCAGCCGTTACGCTGTGGGTGAGCAGCTGGGCAAAGGTGGATTTGGTGTGGTGTACGAAGGTACACGTCTGGAGGATAATCTTAAAgtGGCTTTGAAATACGTCACAAAGACAGAGCACATGGAATGTATATCAATTCCTGATCATCCAGACCCTCTCCCAAAAGAGATTGCCCTCACTATCATGGCGAATAAAGGTCACAGAGTGCCAGAAATCATCAGACTGCTGGACTGGACGGATCACTCTGACCACTACGTCATGGTCCTGGAATGTCCCTCTCCCTGTGAGAATCTGGTTGAGTTCATCAGGCGTCACGGTGGAAGCTTGGACGAGGAGAAAACACGGCAGATCATGTGGCAGGCGACAAACGCCGCACACATGTGCTGCCTCCGTAAAGTGCTCCACCGTGACGTCAAACTGGAGAACCTTCTCATCAACAGGGAGACATCCGAAGTCAAGCTGATCGACTTCGGATGTGGGGACATTCTGGGAAGTTCACCGTTCAAGTCATACCATGGCACACCAGAGTACTCTCCTCCTGAGTACCACCGCAGGGGAGAGTACCAAGGCTGGCCGGCGACGGTCTGGTCACTAGGGATTGTAATGTTCACATTGTTGTGTGGAGATTTCCCTAGTTACCAGGACCTGCTCCTGCTGGAGCACAACAAGTGGTCCAAACCTGGCCTGTCACAGGAATGCTGTGACTTACTAAGGGTTCTTCTCCACGAGAAGCCAATCCGGCGACTTGGTCTGGGGCAAATCAGGTCCCACAACTGGTTTATGgtCGTCTTATAGGACCACTCCGGTTGGCGCCTCTCTTGCAGCTTTGCGTCTTGCGGGCTGCAGCGGGAGGTGCTTTCATCCCTCCTCTCGCCTTTGCGTCTTGCGGGGCGAGCAAGCCTTGTGTAGCGTCTTGCGCCTTGGCTTGAGGAAGCAGTATTAGCGTCTGGCGGTACTGCTTCCGGGGGGGATgtgtacatattgtatatatgtacatacttCTTTTGGTTGCCCCTTTTTGTTTGTCCCATCATGGCCGCTCCATTCCTGAGGTTCCTGCCACAGCTGTCCAGATGCCAGAGCTCTCGGTCTTCACCTTCACAGTGATGGAGCTCCTATTCTCTGTTTTCCGGAggaaaacacat

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251162.1 True 1265 mRNA 0.53 7 15835096 15838380

Neighbor

gene id symbol gene type direction distance location
LOC122353239 taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088 coding downstream 13109 15820992 ~ 15821987 (-)
LOC122353102 LOC107558094,LOC107658523,LOC107730955,LOC107558078,LOC107558105,LOC107658550,LOC103911781 coding downstream 26039 15805107 ~ 15809057 (-)
LOC122353177 LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107558078,LOC107658550,LOC103911781 coding downstream 34332 15799790 ~ 15800764 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding downstream 37560 15796544 ~ 15797536 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding downstream 60223 15773887 ~ 15774873 (-)
LOC122352473 pim3,LOC107732271 coding upstream 9409 15847789 ~ 15849992 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding upstream 23797 15862177 ~ 15864530 (-)
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding upstream 34110 15872490 ~ 15890490 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding upstream 93575 15931955 ~ 15958445 (-)
brf2 LOC107746211,LOC107658585,LOC107758611,LOC107558130,LOC107689884,LOC107682650 coding upstream 151213 15989593 ~ 15993972 (-)
LOC122352573 NA non-coding downstream 3170 15831207 ~ 15831926 (-)
LOC122352661 NA non-coding downstream 7540 15827084 ~ 15827556 (-)
G77715 NA non-coding downstream 187233 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 440544 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 466420 15368401 ~ 15368676 (-)
LOC122352641 NA non-coding upstream 1133 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 1971 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 64507 15902887 ~ 15912782 (-)
LOC122353198 NA non-coding upstream 76668 15915048 ~ 15917942 (-)
G77827 NA non-coding upstream 82541 15920921 ~ 15921360 (-)
G77702 NA other downstream 476864 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 545424 15229969 ~ 15289672 (-)
G77671 NA other downstream 727344 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1245197 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1349804 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 54264 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 178291 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 192147 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 334098 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 577528 16415908 ~ 16490354 (-)

Expression


Co-expression Network