slc9a6b (slc9a6b,LOC107720626,LOC107701149,LOC107718745,LOC107555173,LOC106563705)


Basic Information

Item Value
gene id slc9a6b
gene name slc9a6b,LOC107720626,LOC107701149,LOC107718745,LOC107555173,LOC106563705
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10216825 ~ 10224105 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251178.1
GGGATGTTCCGTAAAGGTTGTTGCGGCAGTTTTCACGCCGCTATGTGAAGGTAAATAGATCGCCGTGATTCACATCAGCAGCACCACAGCGCTCACAAACACAGCCATGACGGGATGTCAGAGGAGACGCGCCTCCGTCTCGGGCGCTTTTATGCTCCCGCGTCTGCTCTGCCTGCTGTGTTTTGCTGTCCTTAGTCTGGCTGAGAACACGGAGATGGTGAATGTGGTAACGGAGAGGAAAGCGGAGGAGAGCCACAGGCAGGACAGCGCCAATCTGCTCGTATTCATCATGTTACTCACACTCACTATCCTCACGATATGGCTGTTCAAACACCGCCGGTTCAGGTTTCTACACGAGACGGGTTTAGCTATGATTTATGGTTTGTTTGTGGGTGTAATTCTGCGTTTTGGCGTCCATTTCCCACAAGACGTAAATAACACCACCTTGACTTGTGCCGTGAACAGCAGTCCCACCACCATCCTGGTGAACGTGAGCGGCCGTTTCTATGAGTACAGCCTGAAAGGAGAGGTCCGGGACGGCAAGGGCCATGACGTGCCAAATGCAGAGATGCTCAGGAAGGTTACTTTTGATCCTGAGGTTTTCTTCAACATTTTGCTTCCGCCCATCATCTTTCATGCAGGATACAGTCTCAAACGAAggcatttttttagaaatctgGGGTCTATCCTCTCCTATGCCTTTGTGGGCACAATGACGTCATGCTTCGTCACAGGGTTGGTGATGTACGGCTGTGTGGTGTTTATGAAGGTCATCGGTCAGCTTGGAGGGGATTTCTTTTTCACCGACTGCCTTTTCTTCGGGGCTATTGTATCTGCCACTGATCCAGTGACCGTTTTGGCCATTTTCAACGAGCTGAAGGTCGACGTGGATCTGTATGCCCTGATGTTCGGTGAGAGTGTCCTCAATGATGCCGTGGCCATCGTCCTGTCGTCATCAATAGTGGCGTACCAGCCTGAGGGAGACAATCGTCACACGTTTGACGGTAGTGCTTTGCTCAAGTCACTAGGTGTCTTTCTGGGAGTTTTCAGTGGGTCTTTTGCAATGGGGGCTGCAACCGGAGTCGTGACAGctttgGTCACAAAGTTCACTAAGCTGCGAGATTTTCCTTTGCTGGAAACGGCCCTTTTCTTCCTCATGTCTTGGAGTACCTTCCTATTGGCTGAGGCCTGCGGCTTCACGGGTGTGGTTGCGGTGCTCTTCTGTGGCATTACTCAGGCTCACTACACATACAACAACCTTTCTGCTGATTCGAAGAGTAGAACCAAACAGCTGTTTGAGCTGCTCAACTTCCTGGCTGAAAACTTTATCTTCTCTTATATGGGCTTGACACTTTTCTCCTTCCAGCACCATGTGTTCAATCCCTTCTTCATCATAGGCGCATTTCTGGCTATATTTCTTGGCAGGGCGGCTAATATCTACCCCTTGTCTTTCCTGTTGAACTTGGGCCGCAAGAATAAAATCGCCTCCAATTTCCAACACGTCATGATGTTTTCAGGGCTCCGAGGGGCAATGACCTTTGCCCTCTCGATTAGGGACACTGCCACATACGCCAGACAGATGATGTTTTCCACCACCCTGCTGATCGTTTTCTTCACGGTGTGGGTCTGTGGGGGCGGGACGACCCCCATGCTGTCACTTATGCAGATTCGAGTGGGAGTGGACACAGATCAAGATAATTCAGTCCCAGCCCCGGATGGGATGCCACAAAGAAGTAGCAAGCATGAGAGCGCCTGGCCGTTCAGACTGTGGTATACTTTTGACCACAATTATTTAAAGCCCTTCCTCACTCACAGCGGGCCTCCGCTCACTTCCACTCTGCCGGCCTGCTGCGGTCCGATAGCACGCTGTCTCACCAGCTCGCAGGCCTACGAGAATGCTGGTCAGTTAAACGATGAAGACACGGAGCTGATTCTGAATGACGGCGGTGGTTTGATGTACAGTGACATGACGGTCAGCACAGATGCCCACGGCATGCCCACCACCTCCACCAGCCAGGCCGGGCTGTACTCGCTAGCAGGAACCTCAGACGATCCTCTGGACAGGGAGCTTGCGTTCGGGGGCACCCGTCTGGTTCTTCCCACAGATGAGGCTCCGGACCCCCTGACGTCGTTCCCCCCTCCTCCGCCCTCCCCACCCCTCTCGGACCCTCTGCGCCACAGAGTCTGAGCCTGAGCTGCTAACCTCTCAGCCTCTGCGTGACGCTTTCTTTCACAGATATTAagttaaatgattatttatgcttttattgatTCATTATATTGTgccatatgtatttatttatttgtctagaCACTGGTGTACAATGGTTGTGGTTGCTAATCCTTCTGATTTCTCCCcctcccccccaaaaaaaaagaaaaaaagaaattttgtGTTTGCGTATTGTGAACATCTACGTCTAATGTGAATGCATCAATGTGTCCGGATTGATCATTTCAAAGTCCTACATAACTTGtggctctctttttttttgtataaataagtGCCTATGTCTGGTAACCTGGTGTTTGTACTGTGCTATCCGACTCATTGTTACCTCATTAACATTTActtataaaaaaagagatttattaatatatatatagagaggaAAAGTGACttatttgaaagtgttttgttACTGTTCCACACCCATTGATCCCCTAATAAATGAGATTTGATGTTCCTTTTAA

Function

symbol description
slc9a6b Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to act upstream of or within regulation of pH; sodium ion transport; and transmembrane transport. Predicted to be located in endosome membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and recycling endosome. Is expressed in brain and gill. Human ortholog(s) of this gene implicated in Christianson syndrome. Orthologous to human SLC9A6 (solute carrier family 9 member A6).

NR:

description
PREDICTED: sodium/hydrogen exchanger 6-like

GO:

id name namespace
GO:0006885 regulation of pH biological_process
GO:0055085 transmembrane transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015385 sodium molecular_function

KEGG:

id description
K12041 SLC9A6_7, NHE6_7; solute carrier family 9 (sodium/hydrogen exchanger), member 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251178.1 True 2694 mRNA 0.49 16 10216825 10224105

Neighbor

gene id symbol gene type direction distance location
synj1 synj1,LOC107693927 coding upstream 742 10192461 ~ 10216083 (+)
trim47 trim47,LOC107701143,LOC107718738,LOC107557227,LOC107720633,LOC107693923 coding upstream 215831 9994805 ~ 10000994 (+)
ugt5d1 ugt5d1,LOC107720577,LOC107557224,LOC107693893 coding upstream 369940 9843548 ~ 9846885 (+)
bach1b LOC107693912,LOC107720644,LOC107557217,LOC107555188,LOC107718731,LOC107701131 coding upstream 506105 9700102 ~ 9710720 (+)
rab38b LOC107693892,LOC107557212,LOC107718792,LOC107701102,LOC108277304,LOC108423822 coding upstream 549964 9660717 ~ 9666861 (+)
fhl1b fhl1b,LOC107718794,LOC107701105,LOC107548848,LOC107693928 coding downstream 416 10224521 ~ 10233003 (+)
LOC122353027 LOC107720537,LOC107548822,LOC107693879,LOC107701092,LOC107555121,LOC107718783,LOC107693880 coding downstream 10426 10234531 ~ 10244839 (+)
htatsf1 htatsf1,LOC107720622,LOC107548851,LOC107718746,LOC107555169,LOC107701093 coding downstream 20873 10244978 ~ 10249929 (+)
si:ch73-52f15.5 LOC107548852,LOC107693931,LOC107718747,LOC107701150,LOC107720624,LOC107555170 coding downstream 25958 10250063 ~ 10252897 (+)
tmtops3b tmtops3b,LOC107548824,LOC107720536 coding downstream 33268 10257373 ~ 10261276 (+)
G76332 NA non-coding upstream 33062 10183429 ~ 10183763 (+)
G76299 NA non-coding upstream 57893 10158548 ~ 10158932 (+)
G76294 NA non-coding upstream 110642 10098008 ~ 10106183 (+)
G76293 NA non-coding upstream 111361 10097668 ~ 10105464 (+)
G76292 LOC107557233,LOC107693876,LOC107720538,LOC107555179,LOC107701146,LOC107718741 non-coding upstream 130302 10086304 ~ 10086523 (+)
G76344 NA non-coding downstream 29928 10254033 ~ 10268981 (+)
G76362 NA non-coding downstream 99867 10323972 ~ 10324273 (+)
LOC122352597 NA non-coding downstream 182234 10406339 ~ 10408380 (+)
G76463 auts2,LOC107720532,LOC107693947 non-coding downstream 257540 10481645 ~ 10484184 (+)
G76503 NA non-coding downstream 549515 10773620 ~ 10773977 (+)
frem2a frem2a,frem2,LOC107720635,LOC107701139,LOC107555183,LOC107557211,LOC107693873,LOC107718779 other upstream 224149 9943734 ~ 9992676 (+)
ufm1 ufm1,LOC107701138 other upstream 283604 9926321 ~ 9933221 (+)
map3k7cl map3k7cl,LOC107693871,LOC107701103,LOC107555143,LOC107557207 other upstream 517008 9692099 ~ 9699817 (+)
LOC122353220 slc46a3,LOC107701100,LOC107555149,LOC107718789 other upstream 820778 9349172 ~ 9396047 (+)
gbe1a gbe1,LOC107685012,LOC107708609,LOC106581537,LOC108410718,LOC105900410 other upstream 1009490 9076866 ~ 9207335 (+)
znrd2 sssca1,LOC107720620,LOC107701155,LOC107693896,LOC107548841,LOC107718786,LOC107555163 other downstream 93748 10317853 ~ 10320345 (+)
LOC122352518 NA other downstream 914733 11138838 ~ 11146033 (+)
picalma picalm,picalma,ccdc83,LOC107744613,LOC107699270,LOC107548833,LOC107693888 other downstream 1248907 11473012 ~ 11586547 (+)
hyou1 hyou1,LOC107588517,LOC107691632,LOC107577052,LOC107693979,LOC107747001 other downstream 1496275 11720380 ~ 11730911 (+)
tmem218 tmem218 other downstream 2060255 12284360 ~ 12287592 (+)

Expression


Co-expression Network