ndufa8 (LOC107686420,LOC107597618,LOC107685189,LOC107595579)


Basic Information

Item Value
gene id ndufa8
gene name LOC107686420,LOC107597618,LOC107685189,LOC107595579
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 969707 ~ 971815 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251194.1
TTAACTGACCTTCTCCGCGCGGCCTCGTCCTGCTTCAGACGAGGACCTTGGGTTGTGTTGTGGTGCGAACTGTCACACTCATTTCGGTTAGTTTTGGTGGACTAAAAGTCGCACCATGCCCGGCGTGGTTGAAATTCCGACGCTGCAGGAACTGAACGTCGAAGAGGTTAACGTGTCGTCGGCCGTGCTGAAGGCAGCCGCTCATCACTATGGCTCTCAGTGTGACAAGGCCAACAAAGAGTTCATGCTCTGCCGCTGGGAGGAGAAGGACCCCAGAAAGTGTCTGAAAGAAGGGAAGGAAGTCAATGAATGTGCACTCAACTTCTTCAGGCAGATAAAGGGGAACTGTGCCGAGTCCTTCACAGAGTACTGGACCTGTCTGGATTACTCGAACCTGACCGAGCTGCGCCGCTGTCGCCAGCAGCAGAAGGTGTTTGATAGCTGTGTGCTGGACAAGATGGGCTGGGAGAGGCCAGAGCTGGGAGACCTGTCCAAAGTGACCAAGGTGGCGACCTCCCGGCCCTTGCCTGAAAACCCCTACCATTCACGACCAAGACCTGAGCCCAATGCTCCGATCGAGTCTGAGCTGCAGCCTTCTAAGTACGGCAGCCGCTTGTTCTTCTTCGGCTGGTGAAGAGGGGCGGTCGCTGTCTTATTAATATCATGTTCACCATCTCTGTGCTTCTGACCAGACCAGAGACGGCGTGCCAGTGGCTGCGCTGTAATCCCTTTGTGTCGTGtagaaatgttaataaattttgctcattcaaaacataaaagatttaatttaaa

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

GO: NA

KEGG:

id description
K03952 NDUFA8; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251194.1 True 792 mRNA 0.53 4 969707 971815

Neighbor

gene id symbol gene type direction distance location
lhx6a lhx6,LOC107597616,LOC107685129,LOC106561716 coding upstream 10977 946003 ~ 958730 (+)
paqr3b paqr3b,LOC107713330,LOC107685136,LOC107595565,LOC107744080,LOC107597624,LOC108433513,LOC108276876 coding upstream 67857 898230 ~ 901850 (+)
antxr2b LOC107597625,LOC107744079,LOC107686426,LOC107685134,LOC107713331,LOC107595564 coding upstream 71819 888702 ~ 897888 (+)
rasgef1bb LOC107597626,LOC107595538,LOC107685137,LOC107686427,LOC107713332,LOC107744082 coding upstream 86227 874701 ~ 883480 (+)
snx18b snx18b,LOC107686428,LOC107744084,LOC107685139,LOC107595537,LOC107597629,LOC107713269 coding upstream 121816 844155 ~ 847891 (+)
si:ch211-243g18.2 si:ch211-243g18.2,LOC107744167,LOC107686498,LOC107713290,LOC107685187,LOC107597669 coding downstream 29260 1001075 ~ 1010875 (+)
rc3h2 rc3h2,LOC107595546,LOC107685128,LOC107597668,LOC107713325,LOC107686479 coding downstream 46530 1018345 ~ 1040944 (+)
LOC122352732 rabgap1,LOC107744072,LOC107686418,LOC107685165 coding downstream 70224 1042039 ~ 1112174 (+)
sh2d3ca sh2d3ca,LOC107597612,LOC107744235,LOC107686416,LOC107685125,LOC107595550,LOC107713320 coding downstream 279204 1251019 ~ 1296009 (+)
urm1 urm1,LOC107685124,LOC107686415,LOC107595551,LOC107597610 coding downstream 328664 1300479 ~ 1310034 (+)
G73732 NA non-coding upstream 50214 917796 ~ 919493 (+)
G73739 NA non-coding upstream 62054 906316 ~ 907653 (+)
G73731 NA non-coding upstream 85220 884253 ~ 884487 (+)
G73727 NA non-coding upstream 113823 855214 ~ 855884 (+)
G73711 NA non-coding upstream 161861 807618 ~ 807846 (+)
G73763 NA non-coding downstream 144318 1116133 ~ 1116389 (+)
G73760 NA non-coding downstream 145298 1117113 ~ 1126466 (+)
G73766 NA non-coding downstream 168534 1140349 ~ 1140659 (+)
G73880 NA non-coding downstream 340329 1312144 ~ 1370207 (+)
G73888 NA non-coding downstream 420333 1392148 ~ 1392465 (+)
rbm18 rbm18,LOC107597621,LOC107595545,LOC107685132,LOC107686423 other upstream 23847 934069 ~ 945860 (+)
fstb fstb,LOC107685190,LOC107713293,LOC107686430,LOC107744087,LOC107597631,LOC107595577 other upstream 167784 796011 ~ 801923 (+)
pmaip1 NA other upstream 195333 683106 ~ 774374 (+)
isl1b NA other upstream 273784 692124 ~ 695923 (+)
c10h5orf63 LOC107715565,LOC107657471,LOC107576909 other upstream 570848 396440 ~ 398859 (+)
LOC122352734 LOC107744074,LOC107597614,LOC107686419,LOC107685127,LOC101884949,LOC107713324,LOC107595548 other downstream 105881 1077696 ~ 1084039 (+)
G74226 sh3bp2,LOC107743173,LOC107705055 other downstream 1139381 2111196 ~ 2111694 (+)
G74171 NA other downstream 1222282 2194097 ~ 2200467 (+)
smad2 smad2,LOC107743055,LOC107653131 other downstream 1259607 2231422 ~ 2250897 (+)
cntfr cntfr,LOC107554853,LOC107738850,LOC107756542,LOC107554231 other downstream 1617281 2589096 ~ 2705724 (+)

Expression


Co-expression Network