LOC122353239 (taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088)


Basic Information

Item Value
gene id LOC122353239
gene name taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15820992 ~ 15821987 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251210.1
ATGTCTAACTGGGGAGCGACAAACACGAACAATGAAACATTGCAATACTGCTTTCCAAATAACAACATGTCTTGTACCAATAATGTAAAACATGGAGCCGAGtacatttttgtgtacatatTCATTTCTACAGTATCAGTATTTACTGTGTTTCTGAACTTGTTGGTGATCATCTCCATCGCTCACTTCAAACAGCTCCACACTCCAACCAATGTGCTGATCTTCTCTCTGGCTGTGGCTGATCTGATCGTGGGACTGATTCTTATGCCAGTGCAGGGCATCAAATTGATCGAGCCATGCTGGTACTTCGGAGaaatattttgttcaatttttCCTCTGATTTTCTATGTGGTTGTCACGGCATCTCTTGGTAATTTGATTATTGTATCTGTGGATCGTTATATTGCCGTGAATGACCCTCTGCGATATCCAGCAAGGGTTAATATTAACAGAGCAGTTCTTTCTATTGTTGTAAACTGGGTGTTTTCCTgcatatattctttttttcttttgtatgaGTCTATAGTCCATCCAGAGAAAAATCATGCATGTGTTGGAGAATGCATACTTTATATTGATTTGGGATATATCATAACGGATGTTTTGGTTACTTTAGTGACGCCGTGCTGTTTAATCATTTCTTTATATATCAAAATCTGCTTTGTAGCAAAACAGCAAGCCGAGCACATAAATTCACTCTCTTACAAAAAAGCCAAATCAGAAAAAAAGGCAGCAAGAACCTTAGGGATTGTTGTCATAGTCTATCTTCTTTGTTGGATACCGTATTATATAGCTGCTCTTACGCTTGGGCAAGACACGGGCGATTCTCTTGTAATTAATATCATGTATTGGATTTTATGCATGAATTCATGCTTGAATccaattatttatgcattgtttTATAGGTGGTTTCGCATAtcagcaaaatacattttgactctgaaaatatttgaacCTTCATCAGAATACTTCAACCTGTTCATGCAAGAGAAATGA

Function

symbol description
taar16f Enables trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in schizophrenia and schizophrenia 5. Orthologous to human TAAR6 (trace amine associated receptor 6); TAAR8 (trace amine associated receptor 8); and TAAR9 (trace amine associated receptor 9).

NR:

description
PREDICTED: trace amine-associated receptor 13c-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251210.1 True 996 mRNA 0.37 1 15820992 15821987

Neighbor

gene id symbol gene type direction distance location
LOC122353102 LOC107558094,LOC107658523,LOC107730955,LOC107558078,LOC107558105,LOC107658550,LOC103911781 coding downstream 11935 15805107 ~ 15809057 (-)
LOC122353177 LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107558078,LOC107658550,LOC103911781 coding downstream 20228 15799790 ~ 15800764 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding downstream 23456 15796544 ~ 15797536 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding downstream 46119 15773887 ~ 15774873 (-)
LOC122352466 LOC107658525,LOC107730956,LOC107558095 coding downstream 52058 15767936 ~ 15768934 (-)
LOC122353200 pim3,LOC107732271 coding upstream 13109 15835096 ~ 15838380 (-)
LOC122352473 pim3,LOC107732271 coding upstream 25802 15847789 ~ 15849992 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding upstream 40190 15862177 ~ 15864530 (-)
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding upstream 50503 15872490 ~ 15890490 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding upstream 109968 15931955 ~ 15958445 (-)
G77715 NA non-coding downstream 173129 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 426440 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 452316 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 473703 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 544988 15273913 ~ 15276004 (-)
LOC122352661 NA non-coding upstream 5097 15827084 ~ 15827556 (-)
LOC122352573 NA non-coding upstream 9220 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 17526 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 18364 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 80900 15902887 ~ 15912782 (-)
G77702 NA other downstream 462760 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 531320 15229969 ~ 15289672 (-)
G77671 NA other downstream 713240 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1231093 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1335700 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 70657 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 194684 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 208540 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 350491 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 593921 16415908 ~ 16490354 (-)

Expression


Co-expression Network