CI01000000_13587788_13588280


Basic Information

Item Value
gene id CI01000000_13587788_13588280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 13587403 ~ 13588280 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_13587788_13588280.mRNA
ATGTCTTATGTCATTGTCGCTGAGGCAATAGTGCTCCCATCTGGCATGTCGCTGAGCCTGTTCACCGCAAGAGTGACAGCTCAGATGTCTTTTCTGAGCAAAATATGTACCAGTAAGAATATCTCACAGTCCTACCAAGATGCTTTACATGTATACAGTGCAAATGCACAAGAGCACAATAGACACAATTCAGTGAAAGAGATTATTCAGGGCTTGTTTGGACTCTCTATGCCGTCGGTCTTTGGAACAGATGATAATTATGACCTTAAGCCATGGGAGGAAGGCCAGGCCTTTCAGAGGTCAGAACAACCACAGATTCAGAGAGGTCCGATGATTCATACTCCATAAGGGCCTCAGGTGTTCTGATGATCATTTGGCTGAAATGTCCTCAAAATGGCCATCATTGGTCTTTTTCTTCTCTCTGCCTTTTTTTTTTTTTTTTTTTTCTTTTTAAATAATTGTGTGGTTGCTTGTGTATGTGTGATCCAATGCCATTAACATTTCAGGCCTGTTAGACTACCTTGACTACTTTGCCCTTTTTTGTTTTCCTTTTTTTTTTCTAAAATGATATGAACATCAAATGGAAAACTCTTAAGACCTGAGAGGATTTTGGTGCTGCGATGCTGAACACACTGTGGCATTTTTAGCTCAACATTGACCAGTCATCCATTGACATGGCTTTCGTACAAAACTACCATACACACTCTAGTATCTAGTACCAATACAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_13587788_13588280.mRNA True 733 mRNA 0.40 3 13587403 13588280

Neighbor

gene id symbol gene type direction distance location
CI01000000_13360123_13365788 TMEM144 coding downstream 221615 13360123 ~ 13365788 (-)
CI01000000_13350939_13358816 FAM198B coding downstream 228587 13349956 ~ 13358816 (-)
CI01000000_13152692_13175605 PDGFC coding downstream 411798 13151625 ~ 13175605 (-)
CI01000000_13117207_13118382 MRPL18 coding downstream 469021 13115994 ~ 13118382 (-)
CI01000000_13087976_13097052 SRPX2 coding downstream 488202 13087588 ~ 13099201 (-)
CI01000000_13599770_13622506 NA coding upstream 11490 13599380 ~ 13622506 (-)
CI01000000_13625996_13633130 LRIT3, LRIT3A coding upstream 37433 13625713 ~ 13633130 (-)
CI01000000_13641099_13651719 GPM6AA, DMB, GPM6A, GPM6AB coding upstream 52392 13640672 ~ 13651719 (-)
CI01000000_13672975_13675416 SPATA4 coding upstream 84602 13672882 ~ 13675416 (-)
CI01000000_13676092_13680653 ASB5A coding upstream 87631 13675911 ~ 13680653 (-)
G8982 NA non-coding downstream 29163 13554305 ~ 13558240 (-)
G8758 NA non-coding downstream 172152 13414805 ~ 13415251 (-)
G8737 NA non-coding downstream 207560 13379643 ~ 13379843 (-)
G8735 NA non-coding downstream 208510 13378572 ~ 13378893 (-)
G8731 NA non-coding downstream 212384 13368899 ~ 13375019 (-)
G8997 NA non-coding upstream 8888 13597168 ~ 13597598 (-)
G9022 NA non-coding upstream 115399 13703679 ~ 13703942 (-)
G9024 NA non-coding upstream 124246 13712526 ~ 13712776 (-)
G9025 NA non-coding upstream 124930 13713210 ~ 13713530 (-)
G8699 NA other downstream 275974 13272585 ~ 13311429 (-)
G8125 NA other downstream 2546494 11040269 ~ 11040909 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other downstream 2759808 10824324 ~ 10825464 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other downstream 3172890 10407395 ~ 10409950 (-)
G3931 NA other downstream 7183878 6157013 ~ 6403525 (-)
G9036 NA other upstream 138520 13726800 ~ 13727090 (-)
G9602 NA other upstream 752722 14341002 ~ 14346534 (-)
CI01000000_14200000_14436182 TENM2 other upstream 797077 14200000 ~ 14436253 (-)
G10672 NA other upstream 2638007 16226287 ~ 16231126 (-)
CI01000000_16354158_16360016 NA other upstream 2774228 16353959 ~ 16360213 (-)

Expression


Co-expression Network