LOC122352661


Basic Information

Item Value
gene id LOC122352661
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15827084 ~ 15827556 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251906.1
ACCAGGACCTGCTCCTGCTGGAGCACAACAAGTGGTCCAAACCTGGCCTGTCACAGGAATGCTGTGACTTACTAAGGGTTCTTCTCCACGAGAAGCCAATCCGGCGACTTGGTCTGGGGCAAATCAGGTCCCACAACTGGTTTATGgtCGTCTTATAGGACCACTCCGGTTGGCGCCTCTCTTGCAGCTTTGCGTCTTGCGGGCTGCAGCGGGAGGTGCTTTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251906.1 True 226 lncRNA 0.56 3 15827084 15827556

Neighbor

gene id symbol gene type direction distance location
LOC122353239 taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088 coding downstream 5097 15820992 ~ 15821987 (-)
LOC122353102 LOC107558094,LOC107658523,LOC107730955,LOC107558078,LOC107558105,LOC107658550,LOC103911781 coding downstream 18027 15805107 ~ 15809057 (-)
LOC122353177 LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107558078,LOC107658550,LOC103911781 coding downstream 26320 15799790 ~ 15800764 (-)
LOC122352370 LOC107558105,LOC107658550,LOC107658523,LOC107730955,LOC107558078,LOC107558094,LOC108191508 coding downstream 29548 15796544 ~ 15797536 (-)
LOC122353203 LOC107558078,LOC107658523,LOC107730955,LOC107558094,LOC107558105,LOC107658550,LOC108191508 coding downstream 52211 15773887 ~ 15774873 (-)
LOC122353200 pim3,LOC107732271 coding upstream 7540 15835096 ~ 15838380 (-)
LOC122352473 pim3,LOC107732271 coding upstream 20233 15847789 ~ 15849992 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding upstream 34621 15862177 ~ 15864530 (-)
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding upstream 44934 15872490 ~ 15890490 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding upstream 104399 15931955 ~ 15958445 (-)
G77715 NA non-coding downstream 179221 15644403 ~ 15647863 (-)
G77706 NA non-coding downstream 432532 15392088 ~ 15394552 (-)
G77703 NA non-coding downstream 458408 15368401 ~ 15368676 (-)
G77700 NA non-coding downstream 479795 15345000 ~ 15347289 (-)
G77692 NA non-coding downstream 551080 15273913 ~ 15276004 (-)
LOC122352573 NA non-coding upstream 3651 15831207 ~ 15831926 (-)
LOC122352641 NA non-coding upstream 11957 15839513 ~ 15840066 (-)
LOC122352598 pim3,LOC107732271 non-coding upstream 12795 15840351 ~ 15842537 (-)
LOC122353197 NA non-coding upstream 75331 15902887 ~ 15912782 (-)
LOC122353198 NA non-coding upstream 87492 15915048 ~ 15917942 (-)
G77702 NA other downstream 468852 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 537412 15229969 ~ 15289672 (-)
G77671 NA other downstream 719332 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1237185 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 1341792 14484799 ~ 14485292 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 65088 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 189115 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 202971 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 344922 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 588352 16415908 ~ 16490354 (-)

Expression


Co-expression Network