LOC122353153


Basic Information

Item Value
gene id LOC122353153
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 3587363 ~ 3587894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251963.1
CGCTACTTGTGCTCTGGCTGAGATAAACGGTGAAGAATATTCATTCCGTCCGCGTGCGAAGACTTGAGCAGTTGGCGGTTCGAAGACTGGGGTCATCAAGaAGACGACTGGACACGATACACGTGGAGAATTCATCTCAGCCTGTGTGCTGAATTCTCATAAATACGTTGATATAGTGaataaaatgttcttgtttGTGTCTGTTATGGTGTGAGACTTGTATTTTGTAGTTATGTTCTGTGGAATCCAATAAACTTGGTTTTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251963.1 True 267 lncRNA 0.42 2 3587363 3587894

Neighbor

gene id symbol gene type direction distance location
LOC122352579 LOC107702598,LOC107715893,LOC107653494,LOC107732273 coding upstream 18866 3496746 ~ 3568497 (+)
LOC122352557 plppr1,LOC107750956,LOC107653496,LOC107702599,LOC107710008,LOC102776600 coding upstream 131576 3413925 ~ 3455787 (+)
LOC122352986 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 coding upstream 279013 3271890 ~ 3308350 (+)
LOC122352595 grin3a,LOC107710005,LOC107750958,LOC107653477,LOC107702562 coding upstream 426093 3144873 ~ 3161270 (+)
LOC122353026 NA coding upstream 498387 3086211 ~ 3088976 (+)
carm1l LOC107702592,LOC107715849,LOC107679043,LOC107573847 coding downstream 39273 3627167 ~ 3640861 (+)
sptlc1 sptlc1,LOC107715883,LOC107720388,LOC107702586,LOC107683465,LOC107560407 coding downstream 109647 3697541 ~ 3708314 (+)
ror2 ror2,LOC107702585,LOC107683466 coding downstream 121772 3709666 ~ 3767673 (+)
nfil3 LOC107702584,LOC107558263,LOC107715881,LOC107720386,LOC107560408 coding downstream 180860 3768754 ~ 3772710 (+)
auh auh,LOC107720385 coding downstream 185616 3773510 ~ 3790180 (+)
G74392 NA non-coding upstream 806046 2780642 ~ 2781317 (+)
G74389 NA non-coding upstream 870606 2716522 ~ 2716757 (+)
G74388 NA non-coding upstream 871071 2715379 ~ 2716292 (+)
G74387 NA non-coding upstream 872012 2715056 ~ 2715351 (+)
LOC122352387 NA non-coding upstream 1011281 2520383 ~ 2576082 (+)
G74585 NA non-coding downstream 180307 3768201 ~ 3768652 (+)
G74589 NA non-coding downstream 200863 3788757 ~ 3844512 (+)
G74596 LOC107715844 non-coding downstream 266422 3854316 ~ 3858952 (+)
G74626 NA non-coding downstream 303997 3891891 ~ 3893020 (+)
G74667 NA non-coding downstream 532970 4120864 ~ 4122658 (+)
LOC122352855 LOC107702575,LOC107715854,LOC107732942,LOC107569381,LOC107653476,LOC100002406 other upstream 13011 3569278 ~ 3574352 (+)
il11ra LOC107756541,LOC107554229,LOC107750187,LOC107653503 other upstream 806888 2777859 ~ 2780475 (+)
cntfr cntfr,LOC107554853,LOC107738850,LOC107756542,LOC107554231 other upstream 881639 2589096 ~ 2705724 (+)
smad2 smad2,LOC107743055,LOC107653131 other upstream 1336466 2231422 ~ 2250897 (+)
G74171 NA other upstream 1386896 2194097 ~ 2200467 (+)
enoph1 enoph1,LOC107702573,LOC107715850,LOC107679042,LOC107731803 other downstream 350 3588244 ~ 3617516 (+)
lyrm7 lyrm7,LOC107732862,LOC107715852 other downstream 524 3588418 ~ 3590111 (+)
si:ch73-234b20.5 si:ch73-234b20.5,LOC107702596,LOC107558257,LOC107653492,LOC107573851,LOC107732123,LOC108440734 other downstream 8712 3596606 ~ 3604216 (+)
zgc:113274 LOC107715885,LOC107702590,LOC107720383,LOC107560406 other downstream 76018 3663912 ~ 3668006 (+)
cdc42se2 cdc42se2 other downstream 81109 3669003 ~ 3694596 (+)

Expression


Co-expression Network