LOC122353198


Basic Information

Item Value
gene id LOC122353198
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15915048 ~ 15917942 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251966.1
GTGGCGGTGGTGTGGGTGGAGAAGGAGGCAGAGCCACGTTGATGTTCAGAGAGatggatccaatcagagttatattaaaaattgtccagCTCCCTCCAAGTGTTTTCATGGAGATGAACAGTATTCATTACCTTCTCCCCCGGCTGAGGCCTCATCACAGATACGCGGTCATATCCTCTCCTAAGCCACACCCACAGGGCATCCAGTTTCCCCTAAAAGATCCAAACACAACAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251966.1 True 237 lncRNA 0.50 3 15915048 15917942

Neighbor

gene id symbol gene type direction distance location
bmp1b LOC107688986,LOC107758677,LOC107583398,LOC107746216,LOC107658580,LOC107558131 coding downstream 24558 15872490 ~ 15890490 (-)
pcna pcna,LOC107658578,LOC107583397,LOC107688976 coding downstream 50518 15862177 ~ 15864530 (-)
LOC122352473 pim3,LOC107732271 coding downstream 65056 15847789 ~ 15849992 (-)
LOC122353200 pim3,LOC107732271 coding downstream 76668 15835096 ~ 15838380 (-)
LOC122353239 taar16f,LOC107758680,LOC107583443,LOC108191509,LOC107558088 coding downstream 93061 15820992 ~ 15821987 (-)
aak1b aak1b,LOC107583399,LOC107746214,LOC107658583,LOC107689018 coding upstream 14013 15931955 ~ 15958445 (-)
brf2 LOC107746211,LOC107658585,LOC107758611,LOC107558130,LOC107689884,LOC107682650 coding upstream 71651 15989593 ~ 15993972 (-)
rab11fip1b LOC107758672,LOC107689050,LOC107746209,LOC107583401 coding upstream 76970 15994912 ~ 16009528 (-)
gpat4 gpat4,LOC107746208,LOC107758670,LOC107689060,LOC107558124,LOC107658586,LOC107583403 coding upstream 103135 16021077 ~ 16029140 (-)
ggt1b ggt1b,LOC107758666,LOC107689091,LOC107602052,LOC107658554 coding upstream 164028 16081970 ~ 16095356 (-)
LOC122353197 NA non-coding downstream 2266 15902887 ~ 15912782 (-)
LOC122352598 pim3,LOC107732271 non-coding downstream 72511 15840351 ~ 15842537 (-)
LOC122352641 NA non-coding downstream 74982 15839513 ~ 15840066 (-)
LOC122352573 NA non-coding downstream 83122 15831207 ~ 15831926 (-)
LOC122352661 NA non-coding downstream 87492 15827084 ~ 15827556 (-)
G77827 NA non-coding upstream 2979 15920921 ~ 15921360 (-)
G77830 NA non-coding upstream 9244 15927186 ~ 15927498 (-)
G77831 NA non-coding upstream 10150 15928092 ~ 15928317 (-)
G77821 NA non-coding upstream 13404 15931346 ~ 15931651 (-)
G77820 NA non-coding upstream 17611 15935553 ~ 15987487 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 17816 15892644 ~ 15897232 (-)
G77702 NA other downstream 556816 15357685 ~ 15358232 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other downstream 625376 15229969 ~ 15289672 (-)
G77671 NA other downstream 807296 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 1325149 14568330 ~ 14589899 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 98729 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 112585 16030527 ~ 16057307 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other upstream 254536 16172478 ~ 16177111 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 497966 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 514585 16432527 ~ 16437594 (-)

Expression


Co-expression Network