trnat-agu_2


Basic Information

Item Value
gene id trnat-agu_2
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 7861960 ~ 7862033 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1471
GGcgccgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgggttcgaatcccagcggtgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1471 True 74 tRNA 0.57 1 7861960 7862033

Neighbor

gene id symbol gene type direction distance location
tmem88a tmem88a,LOC107554311,LOC107720688,LOC107742406,LOC107586221,LOC107676001 coding upstream 44259 7812206 ~ 7817701 (+)
kdm6bb LOC107676007,LOC107742353,LOC107720684,LOC107586158,LOC107554308,LOC107678007 coding upstream 51877 7782188 ~ 7810083 (+)
efnb3a efnb3a,LOC107742355,LOC107720690,LOC107678015,LOC107586157,LOC107676033,LOC107554296 coding upstream 114564 7709173 ~ 7747396 (+)
gigyf1b gigyf1,LOC107554307,LOC107586156,LOC107676024,LOC107742356,LOC107678014 coding upstream 153740 7695316 ~ 7708220 (+)
nlgn2b nlgn2b,LOC107554306,LOC107678031,LOC107720555,LOC107675989,LOC108443341 coding upstream 180216 7615404 ~ 7681744 (+)
LOC122353466 NA coding downstream 1746 7863779 ~ 7863912 (+)
ap4m1 ap4m1,LOC107554303,LOC107702797,LOC107742404,LOC107720677,LOC107586161,LOC107675998 coding downstream 4302 7866335 ~ 7871448 (+)
med11 med11,LOC107720680,LOC107702800,LOC107676028 coding downstream 19852 7881885 ~ 7883525 (+)
c10h17orf49 zgc:103508,LOC107720679,LOC107742347,LOC107702799,LOC107675997,LOC107586165,LOC107554320,LOC105902403 coding downstream 23581 7885614 ~ 7889230 (+)
si:dkey-175g6.2 si:dkey-175g6.2,LOC107702794,LOC107720675,LOC107554299,LOC107586203,LOC107742340,LOC107676019 coding downstream 70050 7932083 ~ 7936387 (+)
G75591 LOC107720685,LOC107586160,LOC107676011 non-coding upstream 2248 7840598 ~ 7859712 (+)
G75593 LOC107678008 non-coding upstream 12724 7845219 ~ 7849236 (+)
G75583 NA non-coding upstream 27061 7806361 ~ 7834899 (+)
G75574 NA non-coding upstream 179520 7682154 ~ 7682440 (+)
G75502 NA non-coding upstream 373393 7487475 ~ 7488567 (+)
G75607 NA non-coding downstream 39190 7901223 ~ 7902731 (+)
G75629 NA non-coding downstream 174101 8036134 ~ 8069911 (+)
G75766 NA non-coding downstream 303415 8165448 ~ 8165704 (+)
G75774 NA non-coding downstream 423122 8285155 ~ 8285865 (+)
G75799 NA non-coding downstream 451528 8313561 ~ 8314122 (+)
trnas-gcu_13 NA other upstream 286 7861593 ~ 7861674 (+)
LOC122353465 NA other upstream 581 7861246 ~ 7861379 (+)
si:ch211-237l4.6 NA other upstream 39442 7817810 ~ 7822518 (+)
G75496 LOC107720595,LOC107677995 other upstream 496629 7360984 ~ 7365331 (+)
LOC122353118 pcdh1g1,pcdh1g2,pcdh1g3,pcdh1gb2,pcdh1g9,pcdh1g11,pcdh1gb9,pcdh1g18,pcdh1g33,pcdh1gc5,pcdh1g32,LOC107677968,LOC107742392,LOC107688304,LOC107720705,LOC107552007,LOC107677966,LOC107586189,LOC107742391,LOC107688284,LOC107688294,LOC107586188,LOC107720703,LOC107677965,LOC107586192,LOC107742390,LOC107586191,LOC107552005,LOC107720701,LOC107688268,LOC108191536,LOC107552066,LOC107586138,LOC107687322,LOC107677986,LOC107677985,LOC103911742,LOC107677983,LOC107742370 other upstream 521765 7197537 ~ 7340195 (+)
arrb2a arrb2a,arrb2,LOC107742343,LOC107586162,LOC107676026 other downstream 10506 7872539 ~ 7880100 (+)
G75750 NA other downstream 239443 8101476 ~ 8102924 (+)
LOC122352912 fam136a,LOC107569401,LOC107562571,LOC107713366,LOC107744116,LOC107686460,LOC107688083 other downstream 717976 8580009 ~ 8581128 (+)
G75935 LOC107556871,LOC107718714,LOC107720665,LOC107592158 other downstream 851170 8713203 ~ 8716277 (+)
G75937 NA other downstream 871746 8733779 ~ 8734996 (+)

Expression


Co-expression Network