G78084


Basic Information

Item Value
gene id G78084
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 412039 ~ 412753 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115526
CCAACTCTTCTTagtttttaaagaacagaatAAACTTCAGATAAATGAAGGCTGCTAAACCCGTTCACTGAAGAAGGGTGAGGAGTCCCTGACTGATCGGAGTCACCTGCAGCTGATGGAGGCGCGACAGCCCGCGTCTGAAGAACAGGTCCCAGACGAAGCCCGCGGCGGAGGGTCCGGGCATCTGCTCCAGCGTCTTCACCTGACGCGACGCGGCGCACGCGATGACGTCAGCCCAGCGGTCGGCGCACCTGAGCAGCGGAAGCGCGCTCCTGCCGGACATCCTCAGAGCCTGCGGCGGCATCCTTCACCGGGCGCTCGCGCGGCGCCGCTCTATTTATAGAGAGACTTCCGCGCACACCTTTCCCGGGCTCAGCCAATGGCGTGCGGAGAGCGCCGACGCCCCGCCTACCTCTTCAGAAGAGCAGCCgaagaggatgatgatgatgatgatgatgatgaagtgtACTGTCACGAATCATGAGCTCACGATGACAGGTTAGGAGGAAGTGTGTCCTGATTCAGTGGCCGTGGATGatgtccagtgtgtgtgtgtgtgtgtgtgtgagtgagagagtgtgtgtgagtgagtgtgtgaatgcgag

Function

GO:

id name namespace
GO:0007507 heart development biological_process

KEGG:

id description
ko00100 Steroid biosynthesis
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU115526 True 605 TUCP 0.58 2 412039 412753

Neighbor

gene id symbol gene type direction distance location
si:ch211-159e12.5 NA coding upstream 8631 397191 ~ 403408 (+)
LOC122354142 zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012 coding upstream 46870 351955 ~ 365169 (+)
LOC122353958 sarnp,LOC107683632,LOC107696044 coding upstream 130477 280680 ~ 281562 (+)
LOC122353953 LOC107569407,LOC107688685,LOC107569398,LOC107688486 coding upstream 219182 190906 ~ 192857 (+)
LOC122354020 iars,LOC107697556 coding upstream 295538 69645 ~ 116501 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 12727 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 27467 440220 ~ 442079 (+)
alas1 alas1 coding downstream 30200 442953 ~ 448514 (+)
LOC122354000 NA coding downstream 40809 453562 ~ 456072 (+)
poc1a poc1a,LOC108424582,LOC107747840 coding downstream 44199 456952 ~ 493701 (+)
G78067 cyp27b1 non-coding upstream 614 270996 ~ 411425 (+)
G78081 LOC107747831,LOC107561793,LOC107684010 non-coding upstream 3635 405735 ~ 408404 (+)
G78047 NA non-coding upstream 6566 402445 ~ 405473 (+)
LOC122353670 NA non-coding upstream 7069 403452 ~ 404970 (+)
LOC122354311 NA non-coding upstream 38400 367803 ~ 373639 (+)
G78089 NA non-coding downstream 11633 424386 ~ 425078 (+)
LOC122353680 NA non-coding downstream 658321 1071074 ~ 1074580 (+)
G78370 NA non-coding downstream 782471 1195224 ~ 1195463 (+)
G78380 NA non-coding downstream 804471 1217224 ~ 1222835 (+)
G78400 LOC107747473,LOC107550334,LOC107654802 non-coding downstream 863762 1276515 ~ 1277127 (+)
G78083 NA other upstream 1355 409333 ~ 410684 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other upstream 61597 348517 ~ 350442 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other upstream 77643 333069 ~ 334396 (+)
LOC122353551 NA other upstream 346891 63006 ~ 65148 (+)
iars1 iars,LOC107697556 other downstream 173662 586415 ~ 599371 (+)
atp2b2 atp2b2,LOC107561799,LOC107570616,LOC107746712,LOC102776443,LOC107697566 other downstream 190385 603138 ~ 709490 (+)
atg7 atg7,vgll4,vgll4b,LOC107697561,LOC107750032,LOC107750033,LOC107697562 other downstream 435422 848175 ~ 913799 (+)
tsen2 tsen2 other downstream 621656 1034409 ~ 1040239 (+)
cnbpb cnbpb,cnbp,LOC107742027,LOC107675970,LOC108431552,LOC106566283 other downstream 661954 1074707 ~ 1077399 (+)

Expression


Co-expression Network