G78149


Basic Information

Item Value
gene id G78149
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 270980 ~ 271357 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115651
TGTTCTGTGCGGTGcacctttaataaataaaaataagcagtgCATTAAATTGCTGCAgataattgataataaaagaTGCACCCAACCAGACTCTTCAGAACTGATTAAATCCACAAAGAACCAAAGAGAAGATCTCCTGGTGAAGGTGGAGCTGAGAGCGAGCTTCGAGGAGGTGAGGGCTCTGGAGCTGCAGCAGGAGGCTCTGCTCTTCCAGGTGGACTGTCTTCAGGACGCCCTCCAGAGCACCGAGGAGATGCTGGCCGAGACCCAGAGGGACAACCACAGGCTCATCAC

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0048468 cell development biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process
GO:1905368 peptidase complex cellular_component
GO:1905369 endopeptidase complex cellular_component
GO:0000502 proteasome complex cellular_component

KEGG:

id description
ko03050 Proteasome
ko05169 Epstein-Barr virus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU115651 True 294 lncRNA 0.50 2 270980 271357

Neighbor

gene id symbol gene type direction distance location
LOC122353951 arfgap1 coding downstream 84129 179559 ~ 186851 (-)
LOC122353658 NA coding downstream 263190 5676 ~ 7790 (-)
LOC122353956 LOC107751587,LOC107552203,LOC107696908,LOC107714543 coding upstream 18623 289980 ~ 290350 (-)
cdk4 cdk4,LOC107747701,LOC107701179,LOC107567936,LOC106583286 coding upstream 67738 339095 ~ 346418 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding upstream 96489 367846 ~ 372472 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding upstream 102803 374160 ~ 385324 (-)
si:ch1073-456m8.1 NA coding upstream 114677 386034 ~ 394186 (-)
G78140 NA non-coding downstream 33081 237488 ~ 237899 (-)
G78109 NA non-coding downstream 202711 67765 ~ 68269 (-)
G78106 NA non-coding downstream 205839 63074 ~ 65141 (-)
G78150 NA non-coding upstream 383 271740 ~ 272964 (-)
G78162 NA non-coding upstream 159637 430994 ~ 431422 (-)
G78164 NA non-coding upstream 160330 431687 ~ 438660 (-)
G78167 dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495 non-coding upstream 186936 458293 ~ 506641 (-)
G78192 NA non-coding upstream 321258 592615 ~ 594641 (-)
LOC122353952 cdk4,LOC107747701,LOC107567936,LOC107701179,LOC106583286 other downstream 45149 217174 ~ 225831 (-)
LOC122354323 LOC107706475,LOC107589231,LOC107700775,LOC107591713,LOC107703600,LOC107722831 other upstream 3509 274866 ~ 280577 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other upstream 10906 282263 ~ 288946 (-)
LOC122354324 arfgap1 other upstream 50856 322213 ~ 329039 (-)
LOC122353669 mettl21b,LOC107684011 other upstream 131583 402940 ~ 405411 (-)
G78144 alas1 other upstream 172528 443885 ~ 448901 (-)

Expression


Co-expression Network