G78164


Basic Information

Item Value
gene id G78164
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 431687 ~ 438660 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115673
ACTTTATTACATACCTACACAATagcaataatttattcatgatcttatttaaatgttccTTTCAGTCATTAATCAGGTGTTAcacagcattaaaaacaaatcactgcAGGTTGAAGAAACATCTCAACATCATATAAACTactgaaacattacattttattttaactgtcaCTTTAGTTATTTTATCACGGAAGACGTTTCctttcaaacacattaaaatgcaccctttttatcatctgatcctctttaaaactcttcaaTTGTTTAACATCTGAATGATTTTGATTACACTCATAAACCTGAACTTTATGTGATTGAtgacaataaatgaatatattttcttgttctctgtattttaatatcaatatgGTACAAGATTATCCTCTTTAAATCAATGTGGAAAAACGAGATACAGGtcataagtaataataaatagtgaCTATCACCTCACCGTGTAACGTATTATTACTAGTGAACACTTAGAAGAGCTCGAGATGTACTGAAACACTATTAAACTTAAGAAGAAAGCACTTGTTCAGCTGGGCTAATATTTGATTAGTTTCTCCTCGATCCTCAGATACTGTTTGTTTCtgtcacattaaaacatttgataCTTCATGATGACATTTTGGGCTTTTATTAATGTGTACAGTGTGTCCAGACTCAGTTCATCAAGTATATAAGGTTcatgtcttaaaacaaatacatctcTCTCAGCTGAAAGACTTTGGGAATGTGTTTCAGATCGCTGCGACACAAACATCATCAGTTACTAGCAGAAAACCAACCTCACGATCACGAGCGTCTCCTAAAGAAGACCTCAGACAGGACACGGACACCAAACAGAGACTTCAAGGCACTTCTGTGgcttctgttttcatttggtttttttttgttttttttttaaagctgcataaactaatctttttattttgttcagaaaCTCTGAAGTAGTGATGCAACTAAACTCAAATCAACCGCCAATAACAACACaatctttgaaatgaaaaaaatcttcctttgataaaataaatacttctttCTCTTTCGTTCAGACATTAAAACACTTGTTTTAGGGCAAAGAGTCATAAAATCACTTCCTTGACTTATTCATGATAAGAACAATCTAGTCTGCAGCTCATTAGTAAGTTAGTGagtcattaaatatttctaatctGTACTGTTGAATTATCTTTACTCTGATTCTACACTCGGTGTACTCTCTGTTAGGAATCATATTTCTTCAGCTGTTGCAGTAAATACGTTTTCTGTCGGTCCTGTCAGATCTACAATAGTAGATCTACATAAAGATCAGGACTGAAGCAGGAAAACGTGATTTTTGGATCGAACTGTCAGTTACAGTAAGAACGCTCCTCacatcagaagaagaagaaactctGAGTGATCAGGAGTCAAACTCCGGCTGTTCATCCACCAGAACCGAGGGAGGATACGAGCCTCTGAAGTCCAGACGAGAGACGCCCAGAGCGATCAGACAGCGCCACACctgaggagacagagagagagagagagagagagagagagagagagagagacagagagagagacagagacagagagagagagagagagagagagagaga

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU115673 True 1604 lncRNA 0.36 2 431687 438660

Neighbor

gene id symbol gene type direction distance location
mettl1 mettl1,mettl1-b coding downstream 6022 414402 ~ 425665 (-)
LOC122353667 cyp27b1,LOC107747831,LOC107561793,LOC107684010 coding downstream 19102 406021 ~ 412585 (-)
si:ch1073-456m8.1 NA coding downstream 37501 386034 ~ 394186 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding downstream 46363 374160 ~ 385324 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding downstream 59215 367846 ~ 372472 (-)
vgll4b vgll4,vgll4b,LOC107750033,LOC107697562,LOC107570332 coding upstream 473015 911675 ~ 933876 (-)
tamm41 tamm41 coding upstream 495192 933852 ~ 939272 (-)
LOC122353727 NA coding upstream 538937 977597 ~ 980116 (-)
LOC122353725 timp4,LOC107571219,LOC107667868,LOC107564284,LOC107687318,LOC107742036 coding upstream 546683 985343 ~ 990262 (-)
mkrn2os.2 LOC107758069,LOC107687314,LOC107564281 coding upstream 601707 1040367 ~ 1043419 (-)
G78162 NA non-coding downstream 265 430994 ~ 431422 (-)
G78132 NA non-coding downstream 128469 160995 ~ 303218 (-)
G78150 NA non-coding downstream 158723 271740 ~ 272964 (-)
G78149 NA non-coding downstream 160330 270980 ~ 271357 (-)
G78140 NA non-coding downstream 193788 237488 ~ 237899 (-)
G78167 dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495 non-coding upstream 19633 458293 ~ 506641 (-)
G78192 NA non-coding upstream 153955 592615 ~ 594641 (-)
LOC122353904 NA non-coding upstream 280615 719275 ~ 721631 (-)
G78226 slc6a11,LOC107746711,LOC107686974,LOC107561801,LOC107697565,LOC107750026 non-coding upstream 283804 722464 ~ 723564 (-)
G78298 NA non-coding upstream 467147 905807 ~ 907574 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 26276 402940 ~ 405411 (-)
LOC122354324 arfgap1 other downstream 102648 322213 ~ 329039 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other downstream 142741 282263 ~ 288946 (-)
LOC122354323 LOC107706475,LOC107589231,LOC107700775,LOC107591713,LOC107703600,LOC107722831 other downstream 151110 274866 ~ 280577 (-)
LOC122353952 cdk4,LOC107747701,LOC107567936,LOC107701179,LOC106583286 other downstream 205856 217174 ~ 225831 (-)
G78144 alas1 other upstream 5225 443885 ~ 448901 (-)
G78170 NA other upstream 14474 453134 ~ 455998 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other upstream 160447 599107 ~ 794136 (-)
LOC122353728 NA other upstream 534294 972954 ~ 974787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 778559 1217219 ~ 1260090 (-)

Expression


Co-expression Network