G78167 (dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495)


Basic Information

Item Value
gene id G78167
gene name dusp7,LOC107561798,LOC107677944,LOC107697567,LOC107712495
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 458293 ~ 506641 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115678
GATAaccaaaaaataattcaatatttatttgcagtacAAACAAGTCTTGTATTGGTTTTCATATACTTTACAATACATAGGGACAATTTTATATCCTTCATAAACCAGAAAATTTAACTGCCCGGTTACCAAGCCCAGTATTATACACACAAGATAGAttgtatcttttaaaaaatgtatacagcaCATATAAAACAGCTCTTTGACATTTGAAGCTGTAACACGATGCCGACGcattgtcaaataaaaatcCCTGAAAAATTCCTCGGTGAGGTAAGATATACAGTTCCTTATTCGCTCATCTAGTTCCTGTGTGTGTTGTTCGCTTTCGTTCCTACTGTTATTATTCGCAGAACCGTTGTGTAGCTACAAGAAACGTCCACAGAAAGCCTTGTTCCTGTGTTCTGGCAATATACGAACAGAAAAACACGAACGGTTTCTCTTTCCCATGGTTACAGATACAAACATTCCTCCACAAAAAGCAGCTCGAAATCAAGATGTACACGTAAATAAAGAAGCCGTGAAATGAAGCGCGCTTCCGTCCCGGGGTGATGCGAGAGCGCCGTGTTGTTATTGTGTCTGGGTCGTTTCAACCCGTGATGATTTACATTAATGGGAGCGACTCTTGCATATCTGCACAAGATGagtattacattatattatattatattatatatataatgaaagagagagagagagaaagagaaaagaaaaggccACAGGAGTCAGTATATAGCACGTATTTTGTATAGTAAGGAAATCCGTGGGTTTAATCGAATTGGACGAAACACGAGCGAGCGCCCAGCACCCAGACGCGCTCCGGACACCCCGGGCCAAAAGCTGCCTCCGTTTCAAGCTATATCTCTGTGGATATCTCTAGTATCAAAAGTAGAGGAGTCAAAAACCCGAGGCCGTTTTCTAGAAAATACTGCAAAGGGTTGTTGAGTATATTGCAGAGTAACAAATACAACCTTGACTGACCCGTTAAAGACCATTAGTcgtctattattattactacgtattggtttctttaaaaatgaacaaacgtCTTGGTAATACAACGATTTCTAAAGTGAGATACAAAGAGAGTATTGAACAGTCAGAGTAGGAAAGAATTAAAAAGGTTATATAAGGCCAGCTTAAAGCAACCCTGTTAACTCAAGCACTCGTCCGCTCAGGTCCAGTCGCTCGTTCCTGCGGTCAGGAACGCCCTCGCTACACACTGTTTGCTGCCCGGGGGCAACAAGagtagttaaaaaaacagtCCTCAACATTCGGTGACGTGCCACGCCTCGAGAGGATTGCATGCCCAAATACATCGAGTGAATAGATATACTCTTACGTAgaaattaatacaatatattcatACTGTAATGAGAATCGCCAAGGCCAGAAGGTGAGCGAGCCCGGAAGTCGGGACACAAACGTGGATCTGTCGATCTCGCGGTTAAGGAACAATGAGCTTTAAGTGCGCGCGTCGCCCCACGCAGCTGCGGAGCCTCGTCGCAGCCTAGGACTGGCAGCTCCTCTGAatgtctctttctgtgtgtgttggagTACCGCTTTTAAGTGCCAAGAAGAGAAAGGCTTCGCCACTGTGCAAAACGCATTAGGTCATTGCAAACGTCGAGCGaacgcgagagagagagagagagagacacagagagagagagagagagagagagagagagacacacacacacacacagagagagagagagacacacagagagagagagagagagagagagag
>TU115679
GATAaccaaaaaataattcaatatttatttgcagtacAAACAAGTCTTGTATTGGTTTTCATATACTTTACAATACATAGGGACAATTTTATATCCTTCATAAACCAGAAAATTTAACTGCCCGGTTACCAAGCCCAGTATTATACACACAAGATAGAttgtatcttttaaaaaatgtatacagcaCATATAAAACAGCTCTTTGACATTTGAAGCTGTAACACGATGCCGACGcattgtcaaataaaaatcCCTGAAAAATTCCTCGGTGAGGTAAGATATACAGTTCCTTATTCGCTCATCTAGTTCCTGTGTGTGTTGTTCGCTTTCGTTCCTACTGTTATTATTCGCAGAACCGTTGTGTAGCTACAAGAAACGTCCACAGAAAGCCTTGTTCCTGTGTTCTGGCAATATACGAACAGAAAAACACGAACGGTTTCTCTTTCCCATGGTTACAGATACAAACATTCCTCCACAAAAAGCAGCTCGAAATCAAGATGTACACGTAAATAAAGAAGCCGTGAAATGAAGCGCGCTTCCGTCCCGGGGTGATGCGAGAGCGCCGTGTTGTTATTGTGTCTGGGTCGTTTCAACCCGTGATGATTTACATTAATGGGAGCGACTCTTGCATATCTGCACAAGATGagtattacattatattatattatattatatatataatgaaagagagagagagagaaagagaaaagaaaaggccACAGGAGTCAGTATATAGCACGTATTTTGTATAGTAAGGAAATCCGTGGGTTTAATCGAATTGGACGAAACACGAGCGAGCGCCCAGCACCCAGACGCGCTCCGGACACCCCGGGCCAAAAGCTGCCTCCGTTTCAAGCTATATCTCTGTGGATATCTCTAGTATCAAAAGTAGAGGAGTCAAAAACCCGAGGCCGTTTTCTAGAAAATACTGCAAAGGGTTGTTGAGTATATTGCAGAGTAACAAATACAACCTTGACTGACCCGTTAAAGACCATTAGTcgtctattattattactacgtattggtttctttaaaaatgaacaaacgtCTTGGTAATACAACGATTTCTAAAGTGAGATACAAAGAGAGTATTGAACAGTCAGAGTAGGAAAGAATTAAAAAGGTTATATAAGGCCAGCTTAAAGCAACCCTGTTAACTCAAGCACTCGTCCGCTCAGGTCCAGTCGCTCGTTCCTGCGGTCAGGAACGCCCTCGCTACACACTGTTTGCTGCCCGGGGGCAACAAGagtagttaaaaaaacagtCCTCAACATTCGGTGACGTGCCACGCCTCGAGAGGATTGCATGCCCAAATACATCGAGTGAATAGATATACTCTTACGTAgaaattaatacaatatattcatACTGTAATGAGAATCGCCAAGGCCAGAAGGTGAGCGAGCCCGGAAGTCGGGACACAAACGTGGATCTGTCGATCTCGCGGTTAAGGAACAATGAGCTTTAAGTGCGCGCGTCGCCCCACGCAGCTGCGGAGCCTCGTCGCAGCCTAGGACTGGCAGCTCCTCTGAatgtctctttctgtgtgtgttggagTACCGCTTTTAAGTGCCAAGAAGAGAAAGGCTTCGCCACTGTGCAAAACGCATTAGGTCATTGCAAACGTCGAGCGaacgcgagagagagagagagagagagagagagagaataaagagGGGGAGGGCTcacaatgtttgtttgtgtcgCCAACACCGTCACTACTTTGGACAACATGGTTCTGCGCCGAGGAAAGAGACGAAGATATAGACACGTGTGTGGCGCACCTCTCGGCCTTCGCCCCAAGAACGAATCCGACCCTGCGCTCTCCTCCGGGTAGAAAAGCAAAATCCCACGCGGTGCGAGACGGGAGGGCATCTGCAATCAAAGCTTGCTTCTCTTCGAGCCAAGCGCTGTGCAAAAGTCTCAAGTTTCTTCTCGGGTATCAAACCgtgagaggaaagaaaaaaaaaaaaaaaaacaaaaaaagaacagtcTGTTCCATGAAGGCAAGAAAAGCTGCATTAAAATCCACCGGAGGGCGTGAGAGGGGCCCGTGTGCTTAACCACCCTCCGTCCCTCCCGTCGCCGCGGCTGCTGCTGGCCTGTCCTCCAGGACAAAAGCTCCCCTGGAGATTGGAGATAAACATTCAAAGGGTGGCTGCTCCCACCCAGCATCCTCTGCTGGCCTTCATGTGGACTCCAGCGTGTCCAGCTGGAACATGTTGTGATTGGTGGGCGTGGTGAAGAAGAGCTGGTCGTTGGGCGTCGAGCGGTTGTCGCAGGGACTGTTCAGCCCCAGTGTCCTCTCGAAGTCCAAAAGCTGCCCCATGAAGTTGAAGTTGGGCGAGATGTTGGACTTCTTGCGCTTGACGAAGTCGTAGGCGTCGTTGAGCGACAGGTTGAGCTTCTGCATCAGGTACGCCACCGTGACGGTGACCGAGCGGCTGATGCCTGCTAGGCAGTGCACCAAGATGCCACACTTTTTGGAACGAGCTT

Function

symbol description
dusp7 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in peptidyl-threonine dephosphorylation and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytosol. Is expressed in cranial ganglion and trigeminal placode. Orthologous to human DUSP7 (dual specificity phosphatase 7).

NR:

description
PREDICTED: dual specificity protein phosphatase 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115678 False 1753 lncRNA 0.43 2 458293 506641
TU115679 True 2496 lncRNA 0.47 2 504126 506641

Neighbor

gene id symbol gene type direction distance location
mettl1 mettl1,mettl1-b coding downstream 32628 414402 ~ 425665 (-)
LOC122353667 cyp27b1,LOC107747831,LOC107561793,LOC107684010 coding downstream 45708 406021 ~ 412585 (-)
si:ch1073-456m8.1 NA coding downstream 64107 386034 ~ 394186 (-)
avil avil,LOC107567939,LOC107684013,LOC107711597,LOC107698837,LOC107574443 coding downstream 72969 374160 ~ 385324 (-)
tegt tegt,LOC107574446,LOC107567938,LOC107684007,LOC107713865,LOC107711598,LOC107698838 coding downstream 85821 367846 ~ 372472 (-)
vgll4b vgll4,vgll4b,LOC107750033,LOC107697562,LOC107570332 coding upstream 405034 911675 ~ 933876 (-)
tamm41 tamm41 coding upstream 427211 933852 ~ 939272 (-)
LOC122353727 NA coding upstream 470956 977597 ~ 980116 (-)
LOC122353725 timp4,LOC107571219,LOC107667868,LOC107564284,LOC107687318,LOC107742036 coding upstream 478702 985343 ~ 990262 (-)
mkrn2os.2 LOC107758069,LOC107687314,LOC107564281 coding upstream 533726 1040367 ~ 1043419 (-)
G78164 NA non-coding downstream 19633 431687 ~ 438660 (-)
G78162 NA non-coding downstream 26871 430994 ~ 431422 (-)
G78132 NA non-coding downstream 155075 160995 ~ 303218 (-)
G78192 NA non-coding upstream 85974 592615 ~ 594641 (-)
LOC122353904 NA non-coding upstream 212634 719275 ~ 721631 (-)
G78226 slc6a11,LOC107746711,LOC107686974,LOC107561801,LOC107697565,LOC107750026 non-coding upstream 215823 722464 ~ 723564 (-)
G78298 NA non-coding upstream 399166 905807 ~ 907574 (-)
G78324 pparg non-coding upstream 514835 1021476 ~ 1023810 (-)
G78170 NA other downstream 2295 453134 ~ 455998 (-)
G78144 alas1 other downstream 9392 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 52882 402940 ~ 405411 (-)
LOC122354324 arfgap1 other downstream 129254 322213 ~ 329039 (-)
LOC122353949 prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 other downstream 169347 282263 ~ 288946 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other upstream 92466 599107 ~ 794136 (-)
LOC122353728 NA other upstream 466313 972954 ~ 974787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 710578 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 1082063 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 1197983 1704624 ~ 1716129 (-)

Expression


Co-expression Network