CI01000000_13934872_13936612


Basic Information

Item Value
gene id CI01000000_13934872_13936612
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 13934872 ~ 13936947 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_13934872_13936612.mRNA
ATGAGACTTTACATCCTTCTCAGTTTTCTGCTTTTGGCAGTGTTTTGCAGCTCTCTTGTTGATGCTAGTCGAGTGAAATTTGGCACCCTCTGCAGTCGTAACCCAAGTAACCGTCAAAGAGGATGTGATAAAAAGTATGGCTGTGGACACTATGGAGCCAAGCGTGGGAATCGGAAACATATGGGTCTTGACATTATGTGTGCTGATGGAGACACAGTTGTTGCTCCATTTGATGTGAAGTTGAACGGCAGATCTATGCCATACTCACAGAACAACGCTATCAATGATGGCATTAACTTGAGCGGACAAGGTCTCTGCTTCAAGCTGTTCTACGTTAAGCCAGACCGTTACTCTGGGACCCTAAAGAAAGGGCAGAGGATCGGACGTATGCTCCCAATGCAGAGGGTTTATCCTGGCATCACTTCCCATGTTCACGTTCAAATGTGTGACAGATCAGATCCCACCAAGTATTTCTGATGCCGATTTTGATGACCAACTGCAACTATCAAACCACTTCAAAATCTTCTGCCATACTCTAAAAAATAATTCAAGAGACCTGTTACAAATTAAATTCCAAGTTAAAAATGATCATTTATTGATTTAATTAAAACTTTTAAGCTGCAAACATTATTTTTTTAGTTCTTTAGTTCATAATAATGTTGATCATTACATTAACTTAATAGTGTGTGTAATTTAAACTCAAATTTCTGTTAATTGATTGATTGTTATTTTTTTGTTGAGCCAGCATATTTTTTTGTGTATATATCAGCTTTTTTTCTACATGCTGGTGCCCAGCACTTTGCGATCTAACA

Function

NR:

description
chemotaxin, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_13934872_13936612.mRNA True 812 mRNA 0.38 5 13934872 13936947

Neighbor

gene id symbol gene type direction distance location
CI01000000_13926605_13928231 LECT2L coding upstream 6531 13926519 ~ 13928341 (+)
CI01000000_13923608_13925296 NA coding upstream 9292 13923608 ~ 13925580 (+)
CI01000000_13917448_13919323 NA coding upstream 15028 13917318 ~ 13919844 (+)
CI01000000_13849975_13855802 TDO2A coding upstream 78625 13849975 ~ 13856247 (+)
CI01000000_13787460_13844061 NA coding upstream 90139 13785578 ~ 13844733 (+)
CI01000000_13971301_14008905 FAT1B coding downstream 33440 13970387 ~ 14010358 (+)
CI01000000_14018908_14032529 MTNR1AA, MTNR1AB, MTNR1A coding downstream 81961 14018908 ~ 14032529 (+)
CI01000000_14143399_14175045 NA coding downstream 206452 14127685 ~ 14175354 (+)
CI01000000_14178546_14189186 NA coding downstream 241416 14178363 ~ 14189331 (+)
CI01000000_14718151_14741998 NA coding downstream 780858 14717805 ~ 14742191 (+)
G8909 NA non-coding upstream 10561 13924088 ~ 13924311 (+)
G8906 NA non-coding upstream 18167 13916367 ~ 13916705 (+)
G8905 NA non-coding upstream 18648 13915859 ~ 13916224 (+)
G8904 NA non-coding upstream 21489 13913173 ~ 13913383 (+)
G8812 NA non-coding upstream 62275 13871541 ~ 13872597 (+)
G8912 NA non-coding downstream 5437 13942384 ~ 13942696 (+)
G8918 NA non-coding downstream 28499 13965446 ~ 13965775 (+)
G8920 NA non-coding downstream 31550 13968497 ~ 13968881 (+)
G9159 NA non-coding downstream 145145 14082092 ~ 14082518 (+)
G9168 NA non-coding downstream 168192 14105139 ~ 14108116 (+)
G7522 NA other upstream 1755864 12178369 ~ 12179008 (+)
G7514 NA other upstream 1797864 12136522 ~ 12137008 (+)
G7153 NA other upstream 2689239 11244457 ~ 11245633 (+)
G7018 NA other upstream 2954000 10978489 ~ 10980872 (+)
G6820 NA other upstream 3501854 10427223 ~ 10433018 (+)
G9201 NA other downstream 290490 14215024 ~ 14234941 (+)
G10201 NA other downstream 1993319 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 3402207 17339154 ~ 17346200 (+)
G11465 NA other downstream 3947006 17883953 ~ 17887462 (+)
G11521 NA other downstream 4095792 18032739 ~ 18164112 (+)

Expression


Co-expression Network