G78790


Basic Information

Item Value
gene id G78790
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2825539 ~ 2826794 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116622
caaagacacagagacagatggACATATAAACAGATGGaaagacggacagacagacagagagagagagagacaaagagctTCTTGAGGAAGCAGCAGTCATGTACCTTTGGGCGTGTCTCCGGTGCTGGACGATGACACCGTTCGGCTGCGGTCGGTGTTGAGCGCCTGGGCCTCGTTGCGCTCGCAGTCGTCAGGCTCAGGATCCAGAGGAAGCTCTGGGAAGCGTGGCGTGGTGCCGCGGTGCCGCGCTCCGTTCGTCAGCGAGGTCTCTCCGTTGAAAAGCTCGTACGAGGCGTCCGAAGCGTCGCGGTCAGTCGTACTGATCTCAGACTCCACCAGAGGacagagcagaggtgaggacaGACGCTCCTGTGCACTCAAGATCACGTGACCGTTCGTTTTACACACTTCAGTGTGCTCCTTGCTGGATGGTTTCTGGCCTTCATCctccgcctcctcctcctcctcttcctcatattcttcatcttcatcttcctcctcttcctcctcctcctcatttTCTTGTTTCTCTATCGTTTCTTCAGGTGGATCTGCTTCTTCTTCATTTGGACACTCGTGTGTCTTCGTCTCGTCCTCTGCGCTCTGTGAGAGTGTGCCTTCCGTTTCcgtttcctcttcctctgttttattctcctcttcctcttcctcttcctctctcacaGCTTCATTTCCATCCTGCTCATGTTCTTTTGAGTTTTCACACTCGTTCTCATTCTCAGGAGTGTCCTGTCGCTCAggtggagtgtgtgtgcgtgtgtgtgactCTTCTTCAGCAAGACCATCTGCGGCGGCAAGGATGTCACAACCTTCCTCATTCTCCTGTATTTCCTGCTGATGCTGATCTTGATCTTGAACCTGATCCTGATCCTGATCTTGATCCTGATCCTGATCCTGATCCTGATCTTGATCTTGATCTTGATCTTGATCCTGATCCTGATCTTGATCCTGATCTGGCTCTGCACCTGAGAAACAGAGTCAGAACTATGAGGAAACATTTTAGACAGCCATCAACTCAAAAAACAGTGATGCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116622 True 1054 TUCP 0.51 2 2825539 2826794

Neighbor

gene id symbol gene type direction distance location
LOC122354390 adnpa,LOC107655053,LOC107563106,LOC107727745,LOC107685678,LOC107577312 coding upstream 19952 2800056 ~ 2805587 (+)
ccdc3b ccdc3b,LOC107706913,LOC107699329,LOC107570539,LOC105912203,LOC108435991,LOC106565857 coding upstream 132500 2682706 ~ 2693039 (+)
si:ch211-236d3.4 si:ch211-236d3.4,LOC107570538,LOC107699358,LOC107706914,LOC107724804,LOC107703113 coding upstream 149057 2666508 ~ 2676482 (+)
fhit fhit,LOC107699359,LOC107654179 coding upstream 408081 2180463 ~ 2417458 (+)
odad1 LOC107699332,LOC107592901,LOC107750999,LOC107752162,LOC107654176,LOC107550522 coding upstream 876184 1943662 ~ 1949355 (+)
nek4 nek4,LOC107714488,LOC107566448,LOC107744849 coding downstream 211635 3038429 ~ 3046680 (+)
glt8d1 glt8d1,LOC107714493,LOC107744846 coding downstream 221980 3048774 ~ 3052076 (+)
LOC122353826 pbrm1,LOC107744848,LOC107714479,LOC107699352 coding downstream 231581 3058375 ~ 3076439 (+)
rpn1 rpn1,LOC107714495,LOC107699351,LOC107680451,LOC107744844,LOC107573146 coding downstream 250587 3077381 ~ 3084101 (+)
gata2a gata2a,gata2,LOC107714496,LOC107744843 coding downstream 272924 3099718 ~ 3114020 (+)
G78784 NA non-coding upstream 12257 2812377 ~ 2813282 (+)
G78772 NA non-coding upstream 124836 2700395 ~ 2700703 (+)
G78757 NA non-coding upstream 336986 2488214 ~ 2488553 (+)
G78674 NA non-coding upstream 886453 1936860 ~ 1939086 (+)
G78652 LOC107550538,LOC107697642 non-coding upstream 926476 1898733 ~ 1899063 (+)
G78797 NA non-coding downstream 174325 3001119 ~ 3002991 (+)
G78815 NA non-coding downstream 288631 3115425 ~ 3116430 (+)
G78886 NA non-coding downstream 461407 3288201 ~ 3291400 (+)
G78898 NA non-coding downstream 564770 3391564 ~ 3391790 (+)
G79002 NA non-coding downstream 713194 3539988 ~ 3541069 (+)
G78763 NA other upstream 145397 2678135 ~ 2680142 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other upstream 1099442 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other upstream 1144339 1678226 ~ 1681200 (+)
G78500 NA other upstream 1232414 1590744 ~ 1593125 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other upstream 1307576 1485707 ~ 1517963 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 443405 3270199 ~ 3272619 (+)
LOC122353713 LOC107714487,LOC107555999 other downstream 531416 3358210 ~ 3361658 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other downstream 559464 3386258 ~ 3391229 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other downstream 944761 3771555 ~ 3785342 (+)
trnaq-cug_17 NA other downstream 957170 3783964 ~ 3784035 (+)

Expression


Co-expression Network