G78898


Basic Information

Item Value
gene id G78898
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3391564 ~ 3391790 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116759
gaaaaatttaatttaatagaaatattaaacccttaatttaatgcaaataaatgctccGAAGAGTTTTATTATGCTTATTTTGCGTTTGCCCAGCAGATGTCCTCAGTGTTTTGCGCGCTTTGAAGCAAGGCATTTTACGAATTGTTCGGAAGATTTAGAAAACTGCGTTTCTCTGTTCACACGACTGATTAAGCATATCAGTGCTGTTAAGATCGTTTAAATAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116759 True 227 lncRNA 0.33 1 3391564 3391790

Neighbor

gene id symbol gene type direction distance location
b3galt6 b3galt6,LOC107555998,LOC107714504,LOC107699339,LOC107592565,LOC107680432,LOC107751019 coding upstream 10226 3378085 ~ 3381338 (+)
hipk1b si:ch211-160o17.4,hipk1,LOC107680439,LOC107714503,LOC107699342 coding upstream 13942 3361803 ~ 3377622 (+)
acap3b acap3b,LOC107714502,LOC107751006 coding upstream 35408 3300383 ~ 3356156 (+)
ddx19b ddx19,LOC107680447,LOC107572851,LOC107699345,LOC107556002,LOC108255077,LOC108411521,LOC107714482 coding upstream 106024 3278801 ~ 3285540 (+)
si:dkey-33m11.7 LOC107680412,LOC107555990,LOC107714481,LOC107699319,LOC107751023 coding upstream 124288 3263629 ~ 3267276 (+)
mapk14b mapk14b,LOC107680431,LOC107714506,LOC107699338,LOC103028137,LOC104939458,LOC108436315 coding downstream 993 3392783 ~ 3414919 (+)
srpk1b srpk1b,LOC107699336,LOC107714507,LOC107680449,LOC107592563,LOC107751004 coding downstream 23263 3415053 ~ 3452141 (+)
kif21b kif21b,LOC107592560,LOC107680414 coding downstream 75757 3467547 ~ 3532173 (+)
cpne5b cpne5b,LOC107680428,LOC107555996,LOC107751002,LOC107699334,LOC107101079,LOC105027122,LOC107385564 coding downstream 151908 3543698 ~ 3657289 (+)
LOC122353704 LOC107568056,LOC107730479,LOC107657995 coding downstream 333470 3725260 ~ 3730775 (+)
G78886 NA non-coding upstream 100164 3288201 ~ 3291400 (+)
G78815 NA non-coding upstream 275134 3115425 ~ 3116430 (+)
G78797 NA non-coding upstream 388573 3001119 ~ 3002991 (+)
G78784 NA non-coding upstream 578282 2812377 ~ 2813282 (+)
G78772 NA non-coding upstream 690861 2700395 ~ 2700703 (+)
G79002 NA non-coding downstream 148198 3539988 ~ 3541069 (+)
G79021 NA non-coding downstream 309955 3701745 ~ 3702033 (+)
G79022 NA non-coding downstream 312451 3704241 ~ 3726091 (+)
LOC122353534 NA non-coding downstream 354303 3746093 ~ 3747491 (+)
LOC122354703 NA non-coding downstream 354860 3746650 ~ 3746742 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other upstream 335 3386258 ~ 3391229 (+)
LOC122353713 LOC107714487,LOC107555999 other upstream 29906 3358210 ~ 3361658 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other upstream 118945 3270199 ~ 3272619 (+)
G78790 NA other upstream 564770 2825539 ~ 2826794 (+)
G78763 NA other upstream 711422 2678135 ~ 2680142 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other downstream 379765 3771555 ~ 3785342 (+)
trnaq-cug_17 NA other downstream 392174 3783964 ~ 3784035 (+)
LOC122354455 LOC107710444,LOC107658759,LOC107592584,LOC107745340,LOC107556194,LOC107698002,LOC107592552,LOC107710448,LOC107658524 other downstream 404616 3796406 ~ 3929528 (+)
adgrl2a adgrl2a,adgrl2 other downstream 669139 4060929 ~ 4152591 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other downstream 976635 4368425 ~ 4375388 (+)

Expression


Co-expression Network