G79002


Basic Information

Item Value
gene id G79002
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3539988 ~ 3541069 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116921
tatttttaccaacTGCTTAACTGAAATTTACCTAAACATGctacaaacaaaacatgcaaataaaatttgaaaagtaaaaccttttataatacattataatgcacATATATTTTCTCACCAGCTAATTTTGTTCATTCTGGCCCATTTAGAGATTTATAGAGAACATCAACAAATAGATGCTAAATAACTGCTGTGCACCAAAGCATGAATGATACAGGAAGCAAGCTAATCACAACCTAACATGAGTTACGTACATCGTATAGAAGTTCAGGTCATGTGTGTAAAAAGTTTGCAGCTTGACCAGAAATCGGTGTCATCAATATATCTTCCAAAAGACAACCTCCTTAAACGGTGTACGGAGAGAGTCTTTTCAGTCTGGCGTGTAACTACATTGTGAAAGTGGCATTTAAAGAGGCAGCCGGTCCATCGATCCACTGCTGTCAATCAACAAGACACAAACTCAGACCAGCGCTCACATCCCTGTTCCTCCTTAAATAAAGCAGAGAATCTGCTTTTCAAATGTCTTTAGATCAAAGGTAAAATGTACAgctgagaacaaaaaaaacaatgaacacCCAGTTGTGCATGCATGGAATGCAAAGCCTTTTCTTTGTAGTAAATGAATCATTATCCTCTTCATAAAAAGTACAGCGATCTTGGAAAAGGCTTGACGCGTAGCACATGGCTTCGCAGTTGCACTTTGTTCCCGCCTACGCAAAGCTGTTGTTTGAAGTCTTAATTAAGAGTGTCTTAATTAGTCTttgccttcttttttttcttctttttctccgTATCCTCCTGCTGACCGGCTGACTGCTTTTTCCAGGGCAGGGCGGTGTAGGATACGTACGCAGAAATCAAATACATGGCCATCCCCGTGTATCCACCTATAATCAAACACAGCGGCTGAATCAGCACAAACAGGCAGAAGACATTGACCGAAGCGCTGTCGGGCAAATCCACTCGGCCGTCCTTGTTCGCCTGAAACACGCCGAAGAAATAAACCAGCGCCACGGCTGGGTAGAAAGCAAGTTCTACCATGGTGCCAACTCTCACGTGTGAATGCGTCGCAGCCGGTGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116921 True 1082 lncRNA 0.42 1 3539988 3541069

Neighbor

gene id symbol gene type direction distance location
kif21b kif21b,LOC107592560,LOC107680414 coding upstream 7815 3467547 ~ 3532173 (+)
srpk1b srpk1b,LOC107699336,LOC107714507,LOC107680449,LOC107592563,LOC107751004 coding upstream 87847 3415053 ~ 3452141 (+)
mapk14b mapk14b,LOC107680431,LOC107714506,LOC107699338,LOC103028137,LOC104939458,LOC108436315 coding upstream 125069 3392783 ~ 3414919 (+)
b3galt6 b3galt6,LOC107555998,LOC107714504,LOC107699339,LOC107592565,LOC107680432,LOC107751019 coding upstream 158650 3378085 ~ 3381338 (+)
hipk1b si:ch211-160o17.4,hipk1,LOC107680439,LOC107714503,LOC107699342 coding upstream 162366 3361803 ~ 3377622 (+)
cpne5b cpne5b,LOC107680428,LOC107555996,LOC107751002,LOC107699334,LOC107101079,LOC105027122,LOC107385564 coding downstream 2629 3543698 ~ 3657289 (+)
LOC122353704 LOC107568056,LOC107730479,LOC107657995 coding downstream 184191 3725260 ~ 3730775 (+)
tmem38a tmem38a,LOC107702305,LOC107730482,LOC107658508,LOC107751025 coding downstream 211887 3752956 ~ 3759693 (+)
thop1 thop1,LOC107568058,LOC107658499,LOC107592556,LOC107730481 coding downstream 220477 3761546 ~ 3769572 (+)
reep6 reep6,LOC107698004,LOC107745351,LOC107556177,LOC107658751,LOC107710439 coding downstream 250836 3791905 ~ 3795946 (+)
G78898 NA non-coding upstream 148198 3391564 ~ 3391790 (+)
G78886 NA non-coding upstream 248588 3288201 ~ 3291400 (+)
G78815 NA non-coding upstream 423558 3115425 ~ 3116430 (+)
G78797 NA non-coding upstream 536997 3001119 ~ 3002991 (+)
G78784 NA non-coding upstream 726706 2812377 ~ 2813282 (+)
G79021 NA non-coding downstream 160676 3701745 ~ 3702033 (+)
G79022 NA non-coding downstream 163172 3704241 ~ 3726091 (+)
LOC122353534 NA non-coding downstream 205024 3746093 ~ 3747491 (+)
LOC122354703 NA non-coding downstream 205581 3746650 ~ 3746742 (+)
LOC122354704 NA non-coding downstream 205858 3746927 ~ 3747012 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other upstream 148759 3386258 ~ 3391229 (+)
LOC122353713 LOC107714487,LOC107555999 other upstream 178330 3358210 ~ 3361658 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other upstream 267369 3270199 ~ 3272619 (+)
G78790 NA other upstream 713194 2825539 ~ 2826794 (+)
G78763 NA other upstream 859846 2678135 ~ 2680142 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other downstream 230486 3771555 ~ 3785342 (+)
trnaq-cug_17 NA other downstream 242895 3783964 ~ 3784035 (+)
LOC122354455 LOC107710444,LOC107658759,LOC107592584,LOC107745340,LOC107556194,LOC107698002,LOC107592552,LOC107710448,LOC107658524 other downstream 255337 3796406 ~ 3929528 (+)
adgrl2a adgrl2a,adgrl2 other downstream 519860 4060929 ~ 4152591 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other downstream 827356 4368425 ~ 4375388 (+)

Expression


Co-expression Network