G79003


Basic Information

Item Value
gene id G79003
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3540001 ~ 3541055 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116923
ACGCATTCACACGTGAGAGTTGGCACCATGGTAGAACTTGCTTTCTACCCAGCCGTGGCGCTGGTTTATTTCTTCGGCGTGTTTCAGGCGAACAAGGACGGCCGAGTGGATTTGCCCGACAGCGCTTCGGTCAATGTCTTCTGCCTGTTTGTGCTGATTCAGCCGCTGTGTTTGATTATAGGTGGATACACGGGGATGGCCATGTATTTGATTTCTGCGTACGTATCCTACACCGCCCTGCCCTGGAAAAAGCAGTCAGCCGGTCAGCAGGAGGATAcggagaaaaagaagaaaaaaaagaaggcaaAGACTAATTAAGACACTCTTAATTAAGACTTCAAACAACAGCTTTGCGTAGGCGGGAACAAAGTGCAACTGCGAAGCCATGTGCTACGCGTCAAGCCTTTTCCAAGATCGCTGTACTTTTTATGAAGAGGATAATGATTCATTTACTACAAAGAAAAGGCTTTGCATTCCATGCATGCACAACTGGgtgttcattgttttttttgttctcagcTGTACATTTTACCTTTGATCTAAAGACATTTGAAAAGCAGATTCTCTGCTTTATTTAAGGAGGAACAGGGATGTGAGCGCTGGTCTGAGTTTGTGTCTTGTTGATTGACAGCAGTGGATCGATGGACCGGCTGCCTCTTTAAATGCCACTTTCACAATGTAGTTACACGCCAGACTGAAAAGACTCTCTCCGTACACCGTTTAAGGAGGTTGTCTTTTGGAAGATATATTGATGACACCGATTTCTGGTCAAGCTGCAAACTTTTTACACACATGACCTGAACTTCTATACGATGTACGTAACTCATGTTAGGTTGTGATTAGCTTGCTTCCTGTATCATTCATGCTTTGGTGCACAGCAGTTATTTAGCATCTATTTGTTGATGTTCTCTATAAATCTCTAAATGGGCCAGAATGAACAAAATTAGCTGGTGAGAAAATATATgtgcattataatgtattataaaaggttttacttttcaaattttatttgcatgttttgtttgtagCATGTTTAGGTAAATTTCAGTTAAGCA

Function

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901071 glucosamine-containing compound metabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116923 True 1055 TUCP 0.42 1 3540001 3541055

Neighbor

gene id symbol gene type direction distance location
lhfpl5a lhfpl5a,LOC107592561,LOC107680427,LOC108435128,LOC108254808,LOC108246860 coding downstream 83067 3454410 ~ 3456934 (-)
si:ch211-160o17.6 LOC107699340,LOC107714505,LOC107555993 coding downstream 154210 3381485 ~ 3385791 (-)
pusl1 NA coding downstream 240939 3285961 ~ 3299062 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding downstream 275887 3256879 ~ 3264114 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding downstream 481571 3052696 ~ 3058430 (-)
LOC122354690 NA coding upstream 137707 3678762 ~ 3678926 (-)
LOC122353608 LOC107658808,LOC107568054,LOC107750169 coding upstream 142754 3683809 ~ 3688280 (-)
cdh27 LOC107654208,LOC107730486,LOC107568064 coding upstream 150105 3691160 ~ 3702206 (-)
si:ch211-253b8.5 si:ch211-253b8.5,LOC107653378,LOC107568061,LOC107592587,LOC107680420,LOC107730476 coding upstream 163517 3704572 ~ 3715578 (-)
bmp7a bmp7a,LOC107730480,LOC107657209,LOC107568055,LOC107751030,LOC107658719 coding upstream 191927 3732982 ~ 3742362 (-)
G78969 NA non-coding downstream 125077 3412874 ~ 3414924 (-)
G78919 NA non-coding downstream 272326 3266756 ~ 3267675 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding downstream 273329 3266184 ~ 3266672 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding downstream 298682 3223735 ~ 3241319 (-)
G78903 NA non-coding downstream 307259 3231127 ~ 3232742 (-)
G79010 NA non-coding upstream 113227 3654282 ~ 3657289 (-)
G79069 NA non-coding upstream 175634 3716689 ~ 3719414 (-)
G79075 tmem38a,LOC107730482,LOC107702305,LOC107658508,LOC107751025 non-coding upstream 211875 3752930 ~ 3759723 (-)
G79083 nwd1,LOC107710443,LOC107658741,LOC107592553,LOC107655543,LOC107730478 non-coding upstream 238944 3779999 ~ 3780317 (-)
G79126 NA non-coding upstream 568049 4109104 ~ 4112070 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other downstream 283789 3253863 ~ 3256212 (-)
G78853 gata2a,gata2,LOC107714496 other downstream 426309 3112933 ~ 3113692 (-)
spcs1 spcs1,LOC107566449,LOC107714491,LOC107680421,LOC107699355,LOC107744856,LOC107572401 other downstream 491777 3046738 ~ 3048224 (-)
trnai-aau_68 NA other downstream 553470 2986458 ~ 2986531 (-)
trnaf-aaa NA other downstream 554884 2985044 ~ 2985117 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other upstream 272450 3813505 ~ 3834923 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other upstream 372193 3913248 ~ 3914635 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other upstream 420926 3961981 ~ 3965791 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other upstream 2197961 5739016 ~ 5765140 (-)
G79565 NA other upstream 2555078 6096133 ~ 6096480 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000057_01904867_01921400 NA misc CI01000057 null 1904533 ~ 1921905 (-)