G79022


Basic Information

Item Value
gene id G79022
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3704241 ~ 3726091 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116951
TAGGTGTTATTTGGCTTTATTTTGACTGCAAAGCATCCCCaaccccaaaaaataaaatcaagtaaAATTATACAGATCTGATGTTGACttttatcttaaaaatacaaacctgACACGTTCAGTTTTAGGGTCCACCTCACAAAACCTTTCAAAAATGGTTTATATTTCCTCCCAAATCTAAAGAAATTGTGTGCTATAGCTTAAAGCAAATGAAGCCTGTTAGTGCTGTGAAACAGTGGGTTATGCAAATGCTCACAAGTCAAGACGTGTCGGAGAGCTTGTGGGTACCTAAGTGTTTTTCTGGGCTGACATGAGCCTCTTCCCCAACATCTCATTACATCTTATCACTTTATTGTCCTGTTGAAGCCAAATACAAACAAGTACAAGGAAACTAATGCtcattattagtatttttcGATCATTTTCATAACAATTAAACACAGTTTCCTCTCAAATTCTTATGAACTAAATCacattactttaatttttaaaaaaaattcaacttgtttaatattttatttacaccgTTATTTGTTGTATCGCCTTCTAtgtggttttaaataaatcaaaaattcTAATGGTGCAGTGAAAATCACCattctgttacaaaaaaataaaaaaataatgtaaagatGCAAAGCCAAACCTTAAATACTTAGTTCACCTATAAGTGAAAATACATTCTGCATCTGTTCACCcttatgtcatttttaactgataagattttttattcatcttcacAACAGAAAGTGCACACAACCACAacattttttaagcttttaaaccGTTTTTTTGAGGTTATACATGTTTCATAAAACTAGTCGAGTGGGATATTTGAAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116951 True 840 lncRNA 0.32 2 3704241 3726091

Neighbor

gene id symbol gene type direction distance location
cpne5b cpne5b,LOC107680428,LOC107555996,LOC107751002,LOC107699334,LOC107101079,LOC105027122,LOC107385564 coding upstream 46952 3543698 ~ 3657289 (+)
kif21b kif21b,LOC107592560,LOC107680414 coding upstream 172068 3467547 ~ 3532173 (+)
srpk1b srpk1b,LOC107699336,LOC107714507,LOC107680449,LOC107592563,LOC107751004 coding upstream 252100 3415053 ~ 3452141 (+)
mapk14b mapk14b,LOC107680431,LOC107714506,LOC107699338,LOC103028137,LOC104939458,LOC108436315 coding upstream 289322 3392783 ~ 3414919 (+)
b3galt6 b3galt6,LOC107555998,LOC107714504,LOC107699339,LOC107592565,LOC107680432,LOC107751019 coding upstream 322903 3378085 ~ 3381338 (+)
tmem38a tmem38a,LOC107702305,LOC107730482,LOC107658508,LOC107751025 coding downstream 26865 3752956 ~ 3759693 (+)
thop1 thop1,LOC107568058,LOC107658499,LOC107592556,LOC107730481 coding downstream 35455 3761546 ~ 3769572 (+)
reep6 reep6,LOC107698004,LOC107745351,LOC107556177,LOC107658751,LOC107710439 coding downstream 65814 3791905 ~ 3795946 (+)
LOC122354262 si:ch73-238c9.1,LOC107710444,LOC107658759,LOC107592584,LOC107745343 coding downstream 126521 3852612 ~ 3854297 (+)
trnaq-cug_18 NA coding downstream 181425 3907516 ~ 3907588 (+)
G79021 NA non-coding upstream 2208 3701745 ~ 3702033 (+)
G79002 NA non-coding upstream 163172 3539988 ~ 3541069 (+)
G78898 NA non-coding upstream 312451 3391564 ~ 3391790 (+)
G78886 NA non-coding upstream 412841 3288201 ~ 3291400 (+)
G78815 NA non-coding upstream 587811 3115425 ~ 3116430 (+)
LOC122353534 NA non-coding downstream 20002 3746093 ~ 3747491 (+)
LOC122354703 NA non-coding downstream 20559 3746650 ~ 3746742 (+)
LOC122354704 NA non-coding downstream 20836 3746927 ~ 3747012 (+)
G79039 NA non-coding downstream 22496 3748587 ~ 3749486 (+)
G79037 LOC107745340,LOC107698002,LOC107556194,LOC107710448,LOC107592552,LOC107658524 non-coding downstream 74382 3800473 ~ 3858370 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other upstream 313012 3386258 ~ 3391229 (+)
LOC122353713 LOC107714487,LOC107555999 other upstream 342583 3358210 ~ 3361658 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other upstream 431622 3270199 ~ 3272619 (+)
G78790 NA other upstream 877447 2825539 ~ 2826794 (+)
G78763 NA other upstream 1024099 2678135 ~ 2680142 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other downstream 45464 3771555 ~ 3785342 (+)
trnaq-cug_17 NA other downstream 57873 3783964 ~ 3784035 (+)
LOC122354455 LOC107710444,LOC107658759,LOC107592584,LOC107745340,LOC107556194,LOC107698002,LOC107592552,LOC107710448,LOC107658524 other downstream 70315 3796406 ~ 3929528 (+)
adgrl2a adgrl2a,adgrl2 other downstream 334838 4060929 ~ 4152591 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other downstream 642334 4368425 ~ 4375388 (+)

Expression


Co-expression Network