G79236


Basic Information

Item Value
gene id G79236
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 4399506 ~ 4400590 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU117275
tatctaaacatccttaaatcaagatgcatttagCTGAGTGCAAAatcaaaattaagcaaattcatgcttaaacaaaaacaaatatcttTGAGTGAGgtatgaaaacatattttcccATTGTATTGTAAATGCACTGGTAGatatttttttcctaatttaatcacaatttcatcttcattttcaacaaaaatattttctttttactgcaGTGCAGTGTAaagttattttcatattttggtgGTGGGGAGCAGTGTCCTCTCTAATGCAGTGGTGAACGGCACATTCCAGGGGCCCAATTTTATTGCGGGGCCCCTCAGGCCACAACAGTGGACAAAGGTTTGGTACAATTTAATTGAATCTTGGTGGACTTACACAAACtgtgataaaaatgaaatgctagCAAAATTGCCAGACATCTCTTGGAGGGCAAGAAGAAGACCTTTACCAAGCCAGGAATGGACACGACATGCCATTGGACATGCAATTTCTGCCCTTCACCCACCACAAGACTGATTCCTAAAGGTTTGGCCTGTGGCATCATAAAAATTCCTTTAGGACCTCTGAAACCTTTGTTCATTGGGCGAACAAAGAAGGATCATAAAGATCCATCCATAAACTTAAAACCAAGACGAACTACAACACACCCATATTTCACAGAAATAAGTATAAAAACAGCTATGTGCAACAGTTTGCACAAACACAGATGttcaaaaacagttaaaaaagatgaaccaaaaaattaacattctgtcataatttactcaccgtaCTCAACctaattctgtcataatttacttaataacaaacctgtatgaatttctttgttctgccgaacacaaaggaagatattttgaaaaatgtttgtaaccaggctgttttggatcACTTACTGAAGTAAAACAGATTtcgaactacttgagggtgagtaaatgataacagaattaaaattttttgcaGTTTGATCTTTTTTCATGTTTGGACTTAATGTGTTTGTAACATTGCCAAAGGTATTCTGGTTGAGGTGTGTAAGTAAACTAAACTGAGCTAGACAATGATGTTTctgaattcaataataaaatgccttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117275 True 1085 lncRNA 0.35 1 4399506 4400590

Neighbor

gene id symbol gene type direction distance location
uox uox,uric,LOC107669002,LOC107560424,LOC107658581,LOC107742901,LOC108430123,LOC103030682 coding downstream 15553 4381167 ~ 4383953 (-)
ttll7 ttll7,LOC107745334,LOC107669020 coding downstream 32341 4292348 ~ 4367165 (-)
adgrl4 adgrl4,LOC107556188,LOC107745336,LOC107710447,LOC107592582 coding downstream 396861 3985490 ~ 4002645 (-)
vtg3 vtg3,LOC107745337,LOC107556190,LOC107669019,LOC107710446 coding downstream 416326 3972756 ~ 3983180 (-)
apc2 apc2,LOC107745340,LOC107592552,LOC107556194,LOC107710448,LOC107658524,LOC107698002 coding downstream 448751 3922300 ~ 3950755 (-)
ctbs ctbs,LOC107742908 coding upstream 238 4400828 ~ 4404173 (-)
LOC122354543 agtrap,LOC107745345,LOC107669010,LOC107742911,LOC107557898,LOC107658604,LOC107560425,LOC107560418 coding upstream 5375 4405965 ~ 4412090 (-)
draxina LOC107560421,LOC107745332,LOC107669000,LOC107557905 coding upstream 18330 4418920 ~ 4436036 (-)
pank4 pank4,LOC107742899,LOC107557906,LOC107745330 coding upstream 36284 4436874 ~ 4454436 (-)
ghrh LOC107718698,LOC107557909,LOC107745328,LOC107658696,LOC107560430,LOC107669017 coding upstream 83545 4484135 ~ 4487197 (-)
G79227 NA non-coding downstream 10767 4388101 ~ 4388739 (-)
G79172 NA non-coding downstream 24113 4374648 ~ 4375393 (-)
G79126 NA non-coding downstream 287436 4109104 ~ 4112070 (-)
G79083 nwd1,LOC107710443,LOC107658741,LOC107592553,LOC107655543,LOC107730478 non-coding downstream 619189 3779999 ~ 3780317 (-)
G79075 tmem38a,LOC107730482,LOC107702305,LOC107658508,LOC107751025 non-coding downstream 639783 3752930 ~ 3759723 (-)
G79256 NA non-coding upstream 64197 4464787 ~ 4469281 (-)
LOC122353716 NA non-coding upstream 761439 5162029 ~ 5164464 (-)
G79327 LOC107393734 non-coding upstream 771185 5171775 ~ 5172519 (-)
G79329 LOC107660256,LOC107566921 non-coding upstream 780706 5181296 ~ 5181698 (-)
LOC122354468 NA non-coding upstream 793422 5194012 ~ 5195326 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other downstream 433715 3961981 ~ 3965791 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other downstream 484871 3913248 ~ 3914635 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other downstream 564583 3813505 ~ 3834923 (-)
G79003 NA other downstream 858451 3540001 ~ 3541055 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other downstream 1143294 3253863 ~ 3256212 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other upstream 1338426 5739016 ~ 5765140 (-)
G79565 NA other upstream 1695543 6096133 ~ 6096480 (-)
vamp3 vamp3 other upstream 2413035 6813625 ~ 6847790 (-)
phf13 LOC107756642,LOC107751178,LOC107582403 other upstream 2730988 7131578 ~ 7141236 (-)
LOC122354641 svbp other upstream 2752875 7153465 ~ 7155275 (-)

Expression


Co-expression Network