megf6b (megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979)


Basic Information

Item Value
gene id megf6b
gene name megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 5286439 ~ 5346832 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU117441
CTTTTCCCTGCTGTCATTTGCTGCTGCGGTTTCAGTCGCTTTCCACGCGCGTTAGTATGGACGCAGATTAGTTAGTTTTAATAAGGCTTTACGGGTGTTATTTAGCTGCAGGGATCTTTCTTAAAGGCGTATGAAGATGGacgtgttattttatttcattctaatTAATGGAATTTATGCAGCATCCCCTTCTGAAAGGAAACTGATGCCGCACATGCctaatgtgtgtgctgtgcagGAGGTGAAGCTTGTGGCCCAGATGCAGCCATGTGTTCAGGCCTTCACACGGATGGTTAAAGCCTGGAAACAGGGATGTCTAGGACAGTCATGGTGCATGGGCTACGAGAGGAGAACAGCTTACTATACTGCATACAGACAGGTGTATCGACAGGAGCACCAGACGGTTCACAAGTGCTGTCCAGGATGGTCACAGCTCAACGGGGAGGCTGGATGCCTGTATCCTGCGTGCAGTTTTGGCGTGTGTTTTAATGGAGGTCGGTGCACAGAAGGGTCTGCTCAACTCTGCCACTGTTCGGCTGGATTCAGTGGTCCGAGCTGCCAGTATGATGTAAACGAGTGTGAAGAGACCAATGGAGGATGTGAAGCTCTTTGCTGTAACACC
>TU117444
agtgTGTCCCGCCGGCCGCTTTGGAGTGGGCTGCTCTCAGCGCTGTGACTGCAATAACAGAGGCCTGTGTGACACCGTCTCTGGAAACTGTTCATGTGGCCTCGGCTGGACCGGCTCACGTTGTGAGAGAGagtgTGTCGAGGGTCGCTTTGGTCCTGACTGTGCTCTGCAGTGTTTATGTCAGAATAACAGCACATGTGACCGAATGACAGGAAGCTGCCGCTGTCAGCTGGGATACTACGGTCATCTTTGTCAACACGcatgTCCTGCCGGTCTCTTCGGCTCTGGCTGTCAGCAGCTCTGTGACTGTATGAATGGGGCTTCATGTGACCCCAGAACCGGACAG
>XM_043252523.1
CGTCTCGTTCCTCTCAAAGGACATTCCCTTCACTGCTTCCACAGGAAAACGGTGTCCTGAGGGCATTTGGATCTCGGCTGGTGTCTAAGGTGGATCAAGGGAGTCTTTTCCCTGCTGTCATTTGCTGCTGCGGTTTCAGTCGCTTTCCACGCGCGTTAGTATGGACGCAGATTAGTTAGTTTTAATAAGGCTTTACGGGTGTTATTTAGCTGCAGGGATCTTTCTTAAAGGCGTATGAAGATGGacgtgttattttatttcattctaatTAATGGAATTTATGCAGCATCCCCTTCTGAAAGGAAACTGATGCCGCACATGCctaatgtgtgtgctgtgcagGAGGTGAAGCTTGTGGCCCAGATGCAGCCATGTGTTCAGGCCTTCACACGGATGGTTAAAGCCTGGAAACAGGGATGTCTAGGACAGTCATGGTGCATGGGCTACGAGAGGAGAACAGCTTACTATACTGCATACAGACAGGTGTATCGACAGGAGCACCAGACGGTTCACAAGTGCTGTCCAGGATGGTCACAGCTCAACGGGGAGGCTGGATGCCTGTATCCTGCGTGCAGTTTTGGCGTGTGTTTTAATGGAGGTCGGTGCACAGAAGGGTCTGCTCAACTCTGCCACTGTTCGGCTGGATTCAGTGGTCCGAGCTGCCAGTATGATGTAAACGAGTGTGAAGAGACCAATGGAGGATGTGAAGCTCTTTGCTGTAACACCATTGGCAGTTTCTACTGCAAGTGTCCCGTGGGTCAAGAGCTCAAAGAAGATGGCAGGACCTGTCAGctcaccatcctGCAGGACTCTGAGCGAATCCTGGAGCGGTACGCCAGTGACTCACAGGCAGTGGCGCTGAGAGGCCAGTTCAGAGGCGGCTTACTCCAGAGAGTTCACTATCCGGCATGTCCAGATGGCTGGTTCAGCAGGAATTGCTCATTGGGCTGTAAGTGTATGAACAGTGGTGTGTGGCAGTCCTGTCACCCGGGAGCTGCCACTGTCACAGGTGTCATTGGAGGCTGTGTCAGGATGAAGTGCCCAAAAGTCTCTGGGGTGCTGGATGGGAGGCAGTGTCCACATGATGTATGGAAGAGCGGAGAGCCCGTTGTGACCGTGAGCCGGCTCGATGTGTCTGTCTCCTGGATTCATTGGCAGACTGTGCCAGATCCGCGCCGGATGGGCTGCCAGCTCAGATGTACCTGTGACCAATGGAGGCGATGCCATCCCTCTTGGGGCTTTGTCCCTCCAGGCTGGACAGGCCACAACTGCAGGAAAGTCTGTGACATGGGCAGCTGAGGTCTggactgtgatgtgtgtgactgtggaGTGTGTGATGCTCAGACCGGACACTGTCTTTGCAGGGCAGGGTTCACGGACCACTGTGACCAGAAATGCCCTGGTTGCATTGGCCTGGGTTGCAAGCATCACTGCCAGTGTAAAAACCAGGCGTCATGTGACCATGTGGGGTGGGCTTGCACCTGTAAGACTGGCTGGACCGGAGCACTGCTGAAAATGCTCACGATTCCTGTCCACAGGAGTTTCTATAGTCTGGACTGCATGGAGTGTGTGTGCAGGCAGGGTCTCTGTGATCATATCAGTGGTGTATGTGCCTGTCGGCCCGGCTGGATGGCCTGTAACCAAACATGTCCTACTGGATTGTATGGAGTGAGCTGTTCTCAGACTTGTGTTTGTCACAATAACAGCAGCTGTGATGCTATAAGCGGTCAGTGTGAGTGCAGTGCGGGGTGGACGGGAAGCACCTGCTCCTGGCGTTGTTCTCCAGGTTTCTTCGAGGACAGGCTGTGCTCAGAGAGTGTCTGTGTCAGAGTGGGGCTTCAGTGTGACCCTGACAGTGGACGCTGCTTCTGTCCCAGTGGATGGACAGGTTCAGCTTGTGAACTGGaatGTCCAGGAGGTCAGTTGGGGCAGACTGTCAGGAGATGTGAGTGTCTAAACGATGCTCAGTGTGACGGACAGACGGGTCAGTGTGTTTGTCAGCCAGGCTGGACGGGACAGCGCTGTGAGAAcATGTGTATTAGGCGGTTTGGAGTCGACTGTGAGGGCCGGTGTGAGTCAGACCATGGCGCTGCCTGTCATCATGTGAGTGGACAGTGTTTCTGTCCTGCAGGATGGAGAGGAAGACACTGTGAGAAAGcATGTTTGCCGGGCTTATACGGTCAGGACTGTGTCCAGCGCTGCTCCTGCCCCGGGGCGCCATGCCATCACGTGACGGGACGCTGCGGCTGTTCTCCTGGCTTCACAGGCAATGGCTGCGAGCATAACTGTCTGCCCGGCACCTTCGGCATCGACTGTAATCAGCTCTGTCAGTGTTCAGAAAGAAACCAGCTGTGCCACCCGGTGTCTGGAACATGTTACTGCGCGCCTGGATTCACAGGACCCAAGTGTGAAGAGCtgtgtgctAAAGGTTTCCACGGTCCCGGCTGCAAGTAGAAGCGTTGTCAGTGTCTGAGCGAAGGTGTCTGTCTTCGGTCTCAGGTTCCTGCAGTGTCCGCCGGATTCATCGGGGCCCGCTGTCATCTCAGTAAAATGTCCAGTGGGGACGCCGGGCCGGACTGTGGTCATGTGGCCATCTGCAGGGTAGGTGTGAGGAATGATCCGGTCACCGGGCGATGTGAGGCAGAGGAAGtgTGTCCCGCCGGCCGCTTTGGAGTGGGCTGCTCTCAGCGCTGTGACTGCAATAACAGAGGCCTGTGTGACACCGTCTCTGGAAACTGTTCATGTGGCCTCGGCTGGACCGGCTCACGTTGTGAGAGAGagtgTGTCGAGGGTCGCTTTGGTCCTGACTGTGCTCTGCAGTGTTTATGTCAGAATAACAGCACATGTGACCGAATGACAGGAAGCTGCCGCTGTCAGCTGGGATACTACGGTCATCTTTGTCAACACGcatgTCCTGCCGGTCTCTTCGGCTCTGGCTGTCAGCAGCTCTGTGACTGTATGAATGGGGCTTCATGTGACCCCAGAACCGGACAGTGTCTCTGTCCTCTGGATATGACGCTCTCGCTGTGAGAGAGGTTagatcatcatcttcatcaAGGCACATTCGGCGAGAGCTGCTCTGGGTCGTGTGACTGTGAAGAGGGCACTCCGTGTGACCCTGTGAGCGGCAGCTGTATCTGTGCCTCAGGACGGACAGGGGTCAGGTGTGATAGTGACTGCAGCATGATGCGGTTCGGACCCGACTGTGCTCTCAGCTGTGAATGTGAGAACGGAGCGCTGTGTGACCCTCGAAATGGACGCTGCCTGTGTCTGAACAATTGGATCGGCCTCACATGCTCACAACGTAAACCTGCTTcacacagtcagagtttgaaaGAAACACACTCTCTAGCTAGTTTGGTAGCCAATTCAGGCAAAAACACTCACACGCCTCAAGGCCCTAGCACAACGCACAATTTTTGCGTGCCTTTtcccactttttattattcatcatcATGCTGAAAatctgtagtttttttaaatttgtttataatcACTGCCAAAAA

Function

symbol description
megf6b Predicted to enable calcium ion binding activity. Orthologous to human MEGF6 (multiple EGF like domains 6).
megf6 Predicted to enable calcium ion binding activity.

NR:

description
PREDICTED: multiple epidermal growth factor-like domains protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117441 False 622 TUCP 0.49 5 5286543 5316867
TU117444 False 346 lncRNA 0.56 3 5343232 5345302
XM_043252523.1 True 3506 mRNA 0.54 42 5286439 5346832

Neighbor

gene id symbol gene type direction distance location
mrto4 mrto4,LOC107712985,LOC107701993,LOC107657981,LOC107706552 coding upstream 6900 5275756 ~ 5279539 (+)
her2 LOC107706547 coding upstream 69129 5216350 ~ 5217310 (+)
LOC122354477 LOC107712987,LOC107735212,LOC107701987,LOC107746004,LOC107592853,LOC107557400,LOC107557410 coding upstream 78799 5206693 ~ 5207640 (+)
abhd6a abhd6,abhd6a,LOC107657977,LOC105904082,LOC107557412,LOC107701976 coding upstream 159484 5101916 ~ 5126955 (+)
LOC122354128 LOC107666579,LOC107745321,LOC107658657,LOC107562241,LOC107557895,LOC108438615 coding upstream 488968 4647305 ~ 4797471 (+)
mrps16 mrps16,LOC107756660,LOC107712960 coding downstream 232955 5579787 ~ 5582341 (+)
LOC122354359 NA coding downstream 258710 5605542 ~ 5611505 (+)
LOC122354360 NA coding downstream 268949 5615781 ~ 5617678 (+)
LOC122354618 LOC107712980,LOC107654422 coding downstream 280777 5627609 ~ 5634938 (+)
LOC122353611 tas1r3,LOC107701985,LOC107592907,LOC107654409,LOC107582476 coding downstream 339002 5685834 ~ 5694238 (+)
G79358 NA non-coding upstream 2462 5282352 ~ 5283977 (+)
G79332 NA non-coding upstream 81683 5203680 ~ 5204756 (+)
G79304 NA non-coding upstream 189286 5096940 ~ 5097153 (+)
LOC122354131 NA non-coding upstream 571958 4714070 ~ 4714481 (+)
LOC122354394 NA non-coding upstream 669170 4513060 ~ 4617269 (+)
G79389 NA non-coding downstream 143688 5490520 ~ 5491432 (+)
G79424 NA non-coding downstream 400160 5746992 ~ 5747480 (+)
G79428 NA non-coding downstream 414820 5761652 ~ 5761990 (+)
G79505 NA non-coding downstream 508427 5855259 ~ 5855861 (+)
G79555 NA non-coding downstream 729894 6076726 ~ 6203608 (+)
samd13 samd13,LOC107592550 other upstream 902460 4375839 ~ 4383979 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other upstream 911051 4368425 ~ 4375388 (+)
adgrl2a adgrl2a,adgrl2 other upstream 1133848 4060929 ~ 4152591 (+)
LOC122354455 LOC107710444,LOC107658759,LOC107592584,LOC107745340,LOC107556194,LOC107698002,LOC107592552,LOC107710448,LOC107658524 other upstream 1356911 3796406 ~ 3929528 (+)
nwd1 nwd1,LOC107730478,LOC107710443,LOC107658741,LOC107592553,LOC107655543 other upstream 1501097 3771555 ~ 3785342 (+)
G79640 per3,LOC107751173,LOC107756610,LOC107654358 other downstream 1471713 6818545 ~ 6824545 (+)
elk4 LOC107751188,LOC107654379,LOC107756628,LOC107654450,LOC107582393,LOC107573300 other downstream 2380955 7727787 ~ 7741441 (+)
bsnb LOC107743257,LOC107694876,LOC107579790,LOC107697600,LOC107751196,LOC107582388 other downstream 2728587 8075419 ~ 8150569 (+)
G79889 LOC107751201,LOC107697072,LOC107743253,LOC107578868,LOC107694869 other downstream 2933983 8280815 ~ 8282901 (+)
G80058 LOC107743242,LOC107659551,LOC107575478,LOC107685987,LOC107582425,LOC107751213 other downstream 3255355 8602187 ~ 8604284 (+)

Expression


Co-expression Network